RNA–Protein interactions for RNA: ENST00000474153.1

UBE3C-206, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2

Gene UBE3C, Length 450 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-206ENST00000474153 CALCOCO1Q9P1Z2 691 aa6.22□□□□□ -1.41
UBE3C-206ENST00000474153 WDR35Q9P2L0 1181 aa6.22□□□□□ -1.41
UBE3C-206ENST00000474153 SFMBT1Q9UHJ3 866 aa6.22□□□□□ -1.41
UBE3C-206ENST00000474153 RASAL2Q9UJF2 1139 aa6.22□□□□□ -1.41
UBE3C-206ENST00000474153 TMEM59LQ9UK28 342 aa6.22□□□□□ -1.41
UBE3C-206ENST00000474153 STRIP2Q9ULQ0 834 aa6.22□□□□□ -1.41
UBE3C-206ENST00000474153 MMP17Q9ULZ9 603 aa6.22□□□□□ -1.41
UBE3C-206ENST00000474153 ADAMTS20P59510 1910 aa6.22□□□□□ -1.41
UBE3C-206ENST00000474153 FRYQ5TBA9 3013 aa6.21□□□□□ -1.41
UBE3C-206ENST00000474153 COL5A1P20908 1838 aaPredicted RBP6.21□□□□□ -1.42
UBE3C-206ENST00000474153 PTPRBP23467 1997 aa6.21□□□□□ -1.42
UBE3C-206ENST00000474153 A0A1W2PQJ5 194 aa6.21□□□□□ -1.42
UBE3C-206ENST00000474153 SLC12A8A0AV02 714 aa6.21□□□□□ -1.42
UBE3C-206ENST00000474153 ANTXRLA6NF34 631 aa6.21□□□□□ -1.42
UBE3C-206ENST00000474153 KCNU1A8MYU2 1149 aa6.21□□□□□ -1.42
UBE3C-206ENST00000474153 PRRT4C9JH25 899 aa6.21□□□□□ -1.42
UBE3C-206ENST00000474153 MSI1O43347 362 aaKnown RBP6.21□□□□□ -1.42
UBE3C-206ENST00000474153 HYAL3O43820 417 aaPredicted RBP6.21□□□□□ -1.42
UBE3C-206ENST00000474153 ACSL4O60488 711 aa6.21□□□□□ -1.42
UBE3C-206ENST00000474153 ADAM23O75077 832 aa6.21□□□□□ -1.42
UBE3C-206ENST00000474153 ALDH1A2O94788 518 aa6.21□□□□□ -1.42
UBE3C-206ENST00000474153 TRUB2O95900 331 aaKnown RBP6.21□□□□□ -1.42
UBE3C-206ENST00000474153 TOP3BO95985 862 aaKnown RBP6.21□□□□□ -1.42
UBE3C-206ENST00000474153 APODP05090 189 aa6.21□□□□□ -1.42
UBE3C-206ENST00000474153 TPM2P07951 284 aa6.21□□□□□ -1.42
UBE3C-206ENST00000474153 MMEP08473 750 aa6.21□□□□□ -1.42
UBE3C-206ENST00000474153 IRF1P10914 325 aa6.21□□□□□ -1.42
UBE3C-206ENST00000474153 NCAM1P13591 858 aa6.21□□□□□ -1.42
UBE3C-206ENST00000474153 MMP8P22894 467 aa6.21□□□□□ -1.42
UBE3C-206ENST00000474153 SLC6A4P31645 630 aa6.21□□□□□ -1.42
UBE3C-206ENST00000474153 NOS2P35228 1153 aa6.21□□□□□ -1.42
UBE3C-206ENST00000474153 HOXD12P35452 270 aa6.21□□□□□ -1.42
UBE3C-206ENST00000474153 KRT9P35527 623 aa6.21□□□□□ -1.42
UBE3C-206ENST00000474153 SLC6A11P48066 632 aa6.21□□□□□ -1.42
UBE3C-206ENST00000474153 POLR2FP61218 127 aaKnown RBP6.21□□□□□ -1.42
UBE3C-206ENST00000474153 PITX1P78337 314 aaPredicted RBP6.21□□□□□ -1.42
UBE3C-206ENST00000474153 SLC6A3Q01959 620 aa6.21□□□□□ -1.42
UBE3C-206ENST00000474153 UBXN1Q04323 297 aa6.21□□□□□ -1.42
UBE3C-206ENST00000474153 MTA1Q13330 715 aa6.21□□□□□ -1.42
UBE3C-206ENST00000474153 BYSLQ13895 437 aaKnown RBP6.21□□□□□ -1.42
UBE3C-206ENST00000474153 RAPGEF1Q13905 1077 aa6.21□□□□□ -1.42
UBE3C-206ENST00000474153 CRY1Q16526 586 aa6.21□□□□□ -1.42
UBE3C-206ENST00000474153 UAP1L1Q3KQV9 507 aa6.21□□□□□ -1.42
UBE3C-206ENST00000474153 MPPE1Q53F39 396 aa6.21□□□□□ -1.42
UBE3C-206ENST00000474153 ADGRF1Q5T601 910 aa6.21□□□□□ -1.42
UBE3C-206ENST00000474153 PIK3R6Q5UE93 754 aa6.21□□□□□ -1.42
UBE3C-206ENST00000474153 NADSYN1Q6IA69 706 aa6.21□□□□□ -1.42
UBE3C-206ENST00000474153 TRNP1Q6NT89 227 aa6.21□□□□□ -1.42
UBE3C-206ENST00000474153 SLC23A3Q6PIS1 610 aa6.21□□□□□ -1.42
UBE3C-206ENST00000474153 TRIM72Q6ZMU5 477 aa6.21□□□□□ -1.42
UBE3C-206ENST00000474153 TOGARAM2Q6ZUX3 1019 aa6.21□□□□□ -1.42
UBE3C-206ENST00000474153 IRF2BP2Q7Z5L9 587 aa6.21□□□□□ -1.42
UBE3C-206ENST00000474153 TAC4Q86UU9 113 aa6.21□□□□□ -1.42
UBE3C-206ENST00000474153 PROSER1Q86XN7 944 aa6.21□□□□□ -1.42
UBE3C-206ENST00000474153 PHF13Q86YI8 300 aaPredicted RBP6.21□□□□□ -1.42
UBE3C-206ENST00000474153 MIB1Q86YT6 1006 aa6.21□□□□□ -1.42
UBE3C-206ENST00000474153 CREBRFQ8IUR6 639 aa6.21□□□□□ -1.42
UBE3C-206ENST00000474153 SYT12Q8IV01 421 aa6.21□□□□□ -1.42
UBE3C-206ENST00000474153 DENND1CQ8IV53 801 aa6.21□□□□□ -1.42
UBE3C-206ENST00000474153 SFTPA1Q8IWL2 248 aa6.21□□□□□ -1.42
UBE3C-206ENST00000474153 TMEM35BQ8NCS4 154 aa6.21□□□□□ -1.42
UBE3C-206ENST00000474153 DEFB124Q8NES8 71 aa6.21□□□□□ -1.42
UBE3C-206ENST00000474153 NEK11Q8NG66 645 aa6.21□□□□□ -1.42
UBE3C-206ENST00000474153 RNF139Q8WU17 664 aa6.21□□□□□ -1.42
UBE3C-206ENST00000474153 EDEM1Q92611 657 aa6.21□□□□□ -1.42
UBE3C-206ENST00000474153 PRICKLE1Q96MT3 831 aaPredicted RBP6.21□□□□□ -1.42
UBE3C-206ENST00000474153 NAP1L5Q96NT1 182 aaPredicted RBP6.21□□□□□ -1.42
UBE3C-206ENST00000474153 NOX5Q96PH1 765 aa6.21□□□□□ -1.42
UBE3C-206ENST00000474153 XPO6Q96QU8 1125 aaKnown RBP6.21□□□□□ -1.42
UBE3C-206ENST00000474153 GABRG3Q99928 467 aa6.21□□□□□ -1.42
UBE3C-206ENST00000474153 BBS2Q9BXC9 721 aa6.21□□□□□ -1.42
UBE3C-206ENST00000474153 NACA2Q9H009 215 aa6.21□□□□□ -1.42
UBE3C-206ENST00000474153 FAM207AQ9NSI2 230 aaPredicted RBP6.21□□□□□ -1.42
UBE3C-206ENST00000474153 AIPL1Q9NZN9 384 aa6.21□□□□□ -1.42
UBE3C-206ENST00000474153 NAALADL1Q9UQQ1 740 aa6.21□□□□□ -1.42
UBE3C-206ENST00000474153 ZNF106Q9H2Y7 1883 aaKnown RBP6.21□□□□□ -1.42
UBE3C-206ENST00000474153 ITIH6Q6UXX5 1313 aa6.21□□□□□ -1.42
UBE3C-206ENST00000474153 ANKRD11Q6UB99 2663 aaPredicted RBP6.2□□□□□ -1.42
UBE3C-206ENST00000474153 IGLV3-10A0A075B6K4 115 aa6.2□□□□□ -1.42
UBE3C-206ENST00000474153 PATE3B3GLJ2 98 aa6.2□□□□□ -1.42
UBE3C-206ENST00000474153 C10orf142B7Z368 130 aa6.2□□□□□ -1.42
UBE3C-206ENST00000474153 NEDD8-MDP1E9PL57 170 aa6.2□□□□□ -1.42
UBE3C-206ENST00000474153 I6L893 689 aaPredicted RBP6.2□□□□□ -1.42
UBE3C-206ENST00000474153 PIK3R2O00459 728 aa6.2□□□□□ -1.42
UBE3C-206ENST00000474153 SCAMP3O14828 347 aaKnown RBP6.2□□□□□ -1.42
UBE3C-206ENST00000474153 NPC1O15118 1278 aa6.2□□□□□ -1.42
UBE3C-206ENST00000474153 TRIM24O15164 1050 aa6.2□□□□□ -1.42
UBE3C-206ENST00000474153 GFPT2O94808 682 aa6.2□□□□□ -1.42
UBE3C-206ENST00000474153 HLA-FP30511 346 aa6.2□□□□□ -1.42
UBE3C-206ENST00000474153 USP8P40818 1118 aa6.2□□□□□ -1.42
UBE3C-206ENST00000474153 STAT1P42224 750 aa6.2□□□□□ -1.42
UBE3C-206ENST00000474153 MATKP42679 507 aa6.2□□□□□ -1.42
UBE3C-206ENST00000474153 DHPSP49366 369 aaPredicted RBP6.2□□□□□ -1.42
UBE3C-206ENST00000474153 HARS2P49590 506 aaKnown RBP6.2□□□□□ -1.42
UBE3C-206ENST00000474153 DGKGP49619 791 aa6.2□□□□□ -1.42
UBE3C-206ENST00000474153 VASPP50552 380 aaPredicted RBP6.2□□□□□ -1.42
UBE3C-206ENST00000474153 SGSHP51688 502 aa6.2□□□□□ -1.42
UBE3C-206ENST00000474153 ATXN3P54252 364 aaPredicted RBP6.2□□□□□ -1.42
UBE3C-206ENST00000474153 TBX4P57082 545 aa6.2□□□□□ -1.42
UBE3C-206ENST00000474153 SNX16P57768 344 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms