RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 BAP1Q92560 729 aa5.37□□□□□ -1.55
SNRNP40-204ENST00000474025 TWNKQ96RR1 684 aa5.37□□□□□ -1.55
SNRNP40-204ENST00000474025 USP28Q96RU2 1077 aa5.37□□□□□ -1.55
SNRNP40-204ENST00000474025 CDK5RAP1Q96SZ6 601 aaKnown RBP5.37□□□□□ -1.55
SNRNP40-204ENST00000474025 SLC2A11Q9BYW1 496 aa5.37□□□□□ -1.55
SNRNP40-204ENST00000474025 DCLK3Q9C098 648 aa5.37□□□□□ -1.55
SNRNP40-204ENST00000474025 BTBD1Q9H0C5 482 aa5.37□□□□□ -1.55
SNRNP40-204ENST00000474025 FBRSQ9HAH7 460 aa5.37□□□□□ -1.55
SNRNP40-204ENST00000474025 PPP4R2Q9NY27 417 aa5.37□□□□□ -1.55
SNRNP40-204ENST00000474025 CGNQ9P2M7 1197 aaKnown RBP5.37□□□□□ -1.55
SNRNP40-204ENST00000474025 RASAL2Q9UJF2 1139 aa5.37□□□□□ -1.55
SNRNP40-204ENST00000474025 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.37□□□□□ -1.55
SNRNP40-204ENST00000474025 USP3Q9Y6I4 520 aa5.37□□□□□ -1.55
SNRNP40-204ENST00000474025 ARID1BQ8NFD5 2236 aaPredicted RBP5.36□□□□□ -1.55
SNRNP40-204ENST00000474025 C10orf142B7Z368 130 aa5.36□□□□□ -1.55
SNRNP40-204ENST00000474025 VILLO15195 856 aa5.36□□□□□ -1.55
SNRNP40-204ENST00000474025 TIMM44O43615 452 aa5.36□□□□□ -1.55
SNRNP40-204ENST00000474025 DFNA5O60443 496 aa5.36□□□□□ -1.55
SNRNP40-204ENST00000474025 BRINP1O60477 761 aa5.36□□□□□ -1.55
SNRNP40-204ENST00000474025 FSBPO95073 299 aa5.36□□□□□ -1.55
SNRNP40-204ENST00000474025 WNT1P04628 370 aa5.36□□□□□ -1.55
SNRNP40-204ENST00000474025 RPN1P04843 607 aaKnown RBP5.36□□□□□ -1.55
SNRNP40-204ENST00000474025 C1SP09871 688 aa5.36□□□□□ -1.55
SNRNP40-204ENST00000474025 RALAP11233 206 aa5.36□□□□□ -1.55
SNRNP40-204ENST00000474025 CDK4P11802 303 aa5.36□□□□□ -1.55
SNRNP40-204ENST00000474025 CASP1P29466 404 aa5.36□□□□□ -1.55
SNRNP40-204ENST00000474025 C21orf59P57076 290 aa5.36□□□□□ -1.55
SNRNP40-204ENST00000474025 RACK1P63244 317 aaKnown RBP5.36□□□□□ -1.55
SNRNP40-204ENST00000474025 DLG4P78352 724 aa5.36□□□□□ -1.55
SNRNP40-204ENST00000474025 CFHR1Q03591 330 aa5.36□□□□□ -1.55
SNRNP40-204ENST00000474025 ARID5AQ03989 594 aa5.36□□□□□ -1.55
SNRNP40-204ENST00000474025 TLE3Q04726 772 aa5.36□□□□□ -1.55
SNRNP40-204ENST00000474025 PDE4CQ08493 712 aa5.36□□□□□ -1.55
SNRNP40-204ENST00000474025 EFEMP1Q12805 493 aa5.36□□□□□ -1.55
SNRNP40-204ENST00000474025 SHBQ15464 509 aa5.36□□□□□ -1.55
SNRNP40-204ENST00000474025 KNOP1Q1ED39 458 aaKnown RBP5.36□□□□□ -1.55
SNRNP40-204ENST00000474025 SGSM1Q2NKQ1 1148 aa5.36□□□□□ -1.55
SNRNP40-204ENST00000474025 TTC31Q49AM3 519 aaPredicted RBP5.36□□□□□ -1.55
SNRNP40-204ENST00000474025 FNDC3BQ53EP0 1204 aaKnown RBP5.36□□□□□ -1.55
SNRNP40-204ENST00000474025 PRAMEF14Q5SWL7 426 aa5.36□□□□□ -1.55
SNRNP40-204ENST00000474025 HES3Q5TGS1 186 aa5.36□□□□□ -1.55
SNRNP40-204ENST00000474025 FBXL19Q6PCT2 694 aa5.36□□□□□ -1.55
SNRNP40-204ENST00000474025 UNC13DQ70J99 1090 aa5.36□□□□□ -1.55
SNRNP40-204ENST00000474025 GPR155Q7Z3F1 870 aa5.36□□□□□ -1.55
SNRNP40-204ENST00000474025 KIAA0907Q7Z7F0 614 aaPredicted RBP5.36□□□□□ -1.55
SNRNP40-204ENST00000474025 ADIPOR2Q86V24 386 aa5.36□□□□□ -1.55
SNRNP40-204ENST00000474025 GATAD2AQ86YP4 633 aa5.36□□□□□ -1.55
SNRNP40-204ENST00000474025 ZC3H3Q8IXZ2 948 aaKnown RBP5.36□□□□□ -1.55
SNRNP40-204ENST00000474025 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.36□□□□□ -1.55
SNRNP40-204ENST00000474025 GOLGA5Q8TBA6 731 aa5.36□□□□□ -1.55
SNRNP40-204ENST00000474025 SAP25Q8TEE9 199 aa5.36□□□□□ -1.55
SNRNP40-204ENST00000474025 WFIKKN2Q8TEU8 576 aa5.36□□□□□ -1.55
SNRNP40-204ENST00000474025 DDI1Q8WTU0 396 aa5.36□□□□□ -1.55
SNRNP40-204ENST00000474025 TSC1Q92574 1164 aa5.36□□□□□ -1.55
SNRNP40-204ENST00000474025 TAF4BQ92750 862 aa5.36□□□□□ -1.55
SNRNP40-204ENST00000474025 CYFIP2Q96F07 1278 aa5.36□□□□□ -1.55
SNRNP40-204ENST00000474025 CNDP2Q96KP4 475 aaKnown RBP5.36□□□□□ -1.55
SNRNP40-204ENST00000474025 SLC6A18Q96N87 628 aa5.36□□□□□ -1.55
SNRNP40-204ENST00000474025 ELF4Q99607 663 aaPredicted RBP5.36□□□□□ -1.55
SNRNP40-204ENST00000474025 C7orf25Q9BPX7 421 aa5.36□□□□□ -1.55
SNRNP40-204ENST00000474025 NT5C1AQ9BXI3 368 aa5.36□□□□□ -1.55
SNRNP40-204ENST00000474025 DUSP16Q9BY84 665 aa5.36□□□□□ -1.55
SNRNP40-204ENST00000474025 ACE2Q9BYF1 805 aaPredicted RBP5.36□□□□□ -1.55
SNRNP40-204ENST00000474025 BACH2Q9BYV9 841 aa5.36□□□□□ -1.55
SNRNP40-204ENST00000474025 LRRC27Q9C0I9 530 aa5.36□□□□□ -1.55
SNRNP40-204ENST00000474025 NRSN2Q9GZP1 204 aa5.36□□□□□ -1.55
SNRNP40-204ENST00000474025 CUEDC2Q9H467 287 aa5.36□□□□□ -1.55
SNRNP40-204ENST00000474025 EBF2Q9HAK2 575 aa5.36□□□□□ -1.55
SNRNP40-204ENST00000474025 SGK2Q9HBY8 427 aa5.36□□□□□ -1.55
SNRNP40-204ENST00000474025 APOBEC3GQ9HC16 384 aaKnown RBP5.36□□□□□ -1.55
SNRNP40-204ENST00000474025 SLC39A2Q9NP94 309 aa5.36□□□□□ -1.55
SNRNP40-204ENST00000474025 PRSS16Q9NQE7 514 aa5.36□□□□□ -1.55
SNRNP40-204ENST00000474025 ABCB8Q9NUT2 735 aa5.36□□□□□ -1.55
SNRNP40-204ENST00000474025 DMAC2Q9NW81 257 aa5.36□□□□□ -1.55
SNRNP40-204ENST00000474025 MARCH2Q9P0N8 246 aa5.36□□□□□ -1.55
SNRNP40-204ENST00000474025 TFIP11Q9UBB9 837 aaKnown RBP5.36□□□□□ -1.55
SNRNP40-204ENST00000474025 AK5Q9Y6K8 562 aa5.36□□□□□ -1.55
SNRNP40-204ENST00000474025 UTP20O75691 2785 aaKnown RBP5.36□□□□□ -1.55
SNRNP40-204ENST00000474025 TP53BP1Q12888 1972 aaPredicted RBP5.35□□□□□ -1.55
SNRNP40-204ENST00000474025 PLXNA2O75051 1894 aa5.35□□□□□ -1.55
SNRNP40-204ENST00000474025 A0A1W2PPC4 97 aa5.35□□□□□ -1.55
SNRNP40-204ENST00000474025 SLC12A8A0AV02 714 aa5.35□□□□□ -1.55
SNRNP40-204ENST00000474025 FAM47DPA6NHR8 397 aa5.35□□□□□ -1.55
SNRNP40-204ENST00000474025 ERVH48-1M5A8F1 160 aa5.35□□□□□ -1.55
SNRNP40-204ENST00000474025 YKT6O15498 198 aa5.35□□□□□ -1.55
SNRNP40-204ENST00000474025 LDOC1O95751 146 aaPredicted RBP5.35□□□□□ -1.55
SNRNP40-204ENST00000474025 HLA-DRAP01903 254 aa5.35□□□□□ -1.55
SNRNP40-204ENST00000474025 DNTTP04053 509 aa5.35□□□□□ -1.55
SNRNP40-204ENST00000474025 ITGAVP06756 1048 aa5.35□□□□□ -1.55
SNRNP40-204ENST00000474025 NEFLP07196 543 aa5.35□□□□□ -1.55
SNRNP40-204ENST00000474025 DLDP09622 509 aaKnown RBP5.35□□□□□ -1.55
SNRNP40-204ENST00000474025 PABPC1P11940 636 aaKnown RBP5.35□□□□□ -1.55
SNRNP40-204ENST00000474025 CD46P15529 392 aa5.35□□□□□ -1.55
SNRNP40-204ENST00000474025 CD58P19256 250 aa5.35□□□□□ -1.55
SNRNP40-204ENST00000474025 TRIM21P19474 475 aaKnown RBP5.35□□□□□ -1.55
SNRNP40-204ENST00000474025 PDCP20941 246 aa5.35□□□□□ -1.55
SNRNP40-204ENST00000474025 ABCB4P21439 1286 aa5.35□□□□□ -1.55
SNRNP40-204ENST00000474025 SYT1P21579 422 aa5.35□□□□□ -1.55
SNRNP40-204ENST00000474025 EPHA8P29322 1005 aaPredicted RBP5.35□□□□□ -1.55
SNRNP40-204ENST00000474025 PIK3CAP42336 1068 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms