RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 RHPN2Q8IUC4 686 aa2.27□□□□□ -2.05
CCDC39-203ENST00000473854 FSTL5Q8N475 847 aaPredicted RBP2.27□□□□□ -2.05
CCDC39-203ENST00000473854 ADAMTS14Q8WXS8 1223 aa2.27□□□□□ -2.05
CCDC39-203ENST00000473854 SUCLG2Q96I99 432 aa2.27□□□□□ -2.05
CCDC39-203ENST00000473854 FIZ1Q96SL8 496 aa2.27□□□□□ -2.05
CCDC39-203ENST00000473854 SLC25A33Q9BSK2 321 aa2.27□□□□□ -2.05
CCDC39-203ENST00000473854 ARMT1Q9H993 441 aa2.27□□□□□ -2.05
CCDC39-203ENST00000473854 SAP30LQ9HAJ7 183 aa2.27□□□□□ -2.05
CCDC39-203ENST00000473854 SPAG4Q9NPE6 437 aa2.27□□□□□ -2.05
CCDC39-203ENST00000473854 GAB2Q9UQC2 676 aa2.27□□□□□ -2.05
CCDC39-203ENST00000473854 PRKAB1Q9Y478 270 aa2.27□□□□□ -2.05
CCDC39-203ENST00000473854 SPEF1Q9Y4P9 236 aa2.27□□□□□ -2.05
CCDC39-203ENST00000473854 RSF1Q96T23 1441 aaPredicted RBP2.26□□□□□ -2.05
CCDC39-203ENST00000473854 A0A1W2PNU3 283 aaPredicted RBP2.26□□□□□ -2.05
CCDC39-203ENST00000473854 FOXO6A8MYZ6 492 aa2.26□□□□□ -2.05
CCDC39-203ENST00000473854 TMEM233B4DJY2 109 aa2.26□□□□□ -2.05
CCDC39-203ENST00000473854 H7C4K7 107 aa2.26□□□□□ -2.05
CCDC39-203ENST00000473854 KCNJ13O60928 360 aa2.26□□□□□ -2.05
CCDC39-203ENST00000473854 RASSF9O75901 435 aa2.26□□□□□ -2.05
CCDC39-203ENST00000473854 WDR47O94967 919 aa2.26□□□□□ -2.05
CCDC39-203ENST00000473854 MAP4K4O95819 1239 aaPredicted RBP2.26□□□□□ -2.05
CCDC39-203ENST00000473854 ZNF883P0CG24 379 aa2.26□□□□□ -2.05
CCDC39-203ENST00000473854 AMD1P17707 334 aa2.26□□□□□ -2.05
CCDC39-203ENST00000473854 AKAP5P24588 427 aa2.26□□□□□ -2.05
CCDC39-203ENST00000473854 ZNF84P51523 738 aa2.26□□□□□ -2.05
CCDC39-203ENST00000473854 DMP1Q13316 513 aaPredicted RBP2.26□□□□□ -2.05
CCDC39-203ENST00000473854 SLC29A2Q14542 456 aa2.26□□□□□ -2.05
CCDC39-203ENST00000473854 PLEKHO1Q53GL0 409 aaPredicted RBP2.26□□□□□ -2.05
CCDC39-203ENST00000473854 ZNF474Q6S9Z5 364 aaPredicted RBP2.26□□□□□ -2.05
CCDC39-203ENST00000473854 KCTD20Q7Z5Y7 419 aa2.26□□□□□ -2.05
CCDC39-203ENST00000473854 ASB12Q8WXK4 309 aa2.26□□□□□ -2.05
CCDC39-203ENST00000473854 MAP3K14Q99558 947 aa2.26□□□□□ -2.05
CCDC39-203ENST00000473854 CGRRF1Q99675 332 aa2.26□□□□□ -2.05
CCDC39-203ENST00000473854 CAMSAP3Q9P1Y5 1249 aaPredicted RBP2.26□□□□□ -2.05
CCDC39-203ENST00000473854 CPNE7Q9UBL6 633 aa2.26□□□□□ -2.05
CCDC39-203ENST00000473854 RGS17Q9UGC6 210 aaPredicted RBP2.26□□□□□ -2.05
CCDC39-203ENST00000473854 TBX22Q9Y458 520 aa2.26□□□□□ -2.05
CCDC39-203ENST00000473854 NFS1Q9Y697 457 aa2.26□□□□□ -2.05
CCDC39-203ENST00000473854 SMARCA2P51531 1590 aa2.26□□□□□ -2.05
CCDC39-203ENST00000473854 PEG3Q9GZU2 1588 aa2.26□□□□□ -2.05
CCDC39-203ENST00000473854 TOP2AP11388 1531 aaKnown RBP2.26□□□□□ -2.05
CCDC39-203ENST00000473854 MS4A18H0YCH9 400 aa2.25□□□□□ -2.05
CCDC39-203ENST00000473854 SYT5O00445 386 aa2.25□□□□□ -2.05
CCDC39-203ENST00000473854 ASAP2O43150 1006 aa2.25□□□□□ -2.05
CCDC39-203ENST00000473854 ZG16O60844 167 aa2.25□□□□□ -2.05
CCDC39-203ENST00000473854 SNUPNO95149 360 aaKnown RBP2.25□□□□□ -2.05
CCDC39-203ENST00000473854 LCKP06239 509 aa2.25□□□□□ -2.05
CCDC39-203ENST00000473854 NPR1P16066 1061 aa2.25□□□□□ -2.05
CCDC39-203ENST00000473854 TPH1P17752 444 aa2.25□□□□□ -2.05
CCDC39-203ENST00000473854 EN2P19622 333 aaPredicted RBP2.25□□□□□ -2.05
CCDC39-203ENST00000473854 MMP8P22894 467 aa2.25□□□□□ -2.05
CCDC39-203ENST00000473854 SLC8A1P32418 973 aa2.25□□□□□ -2.05
CCDC39-203ENST00000473854 CPT1AP50416 773 aa2.25□□□□□ -2.05
CCDC39-203ENST00000473854 ITGA8P53708 1063 aa2.25□□□□□ -2.05
CCDC39-203ENST00000473854 ILF3Q12906 894 aaKnown RBP eCLIP2.25□□□□□ -2.05
CCDC39-203ENST00000473854 KRT72Q14CN4 511 aa2.25□□□□□ -2.05
CCDC39-203ENST00000473854 GRHL2Q6ISB3 625 aa2.25□□□□□ -2.05
CCDC39-203ENST00000473854 ZDHHC24Q6UX98 284 aa2.25□□□□□ -2.05
CCDC39-203ENST00000473854 TRMT1LQ7Z2T5 733 aaKnown RBP2.25□□□□□ -2.05
CCDC39-203ENST00000473854 KDELC2Q7Z4H8 507 aa2.25□□□□□ -2.05
CCDC39-203ENST00000473854 CATIPQ7Z7H3 387 aa2.25□□□□□ -2.05
CCDC39-203ENST00000473854 NAGSQ8N159 534 aa2.25□□□□□ -2.05
CCDC39-203ENST00000473854 MBD3L2Q8NHZ7 208 aaPredicted RBP2.25□□□□□ -2.05
CCDC39-203ENST00000473854 MTMR8Q96EF0 704 aa2.25□□□□□ -2.05
CCDC39-203ENST00000473854 C1GALT1C1Q96EU7 318 aa2.25□□□□□ -2.05
CCDC39-203ENST00000473854 PYGO2Q9BRQ0 406 aa2.25□□□□□ -2.05
CCDC39-203ENST00000473854 GTPBP4Q9BZE4 634 aaKnown RBP2.25□□□□□ -2.05
CCDC39-203ENST00000473854 SMURF2Q9HAU4 748 aa2.25□□□□□ -2.05
CCDC39-203ENST00000473854 RNF146Q9NTX7 359 aa2.25□□□□□ -2.05
CCDC39-203ENST00000473854 SAC3D1A6NKF1 404 aa2.24□□□□□ -2.05
CCDC39-203ENST00000473854 FAM72CH0Y354 149 aa2.24□□□□□ -2.05
CCDC39-203ENST00000473854 LIASO43766 372 aa2.24□□□□□ -2.05
CCDC39-203ENST00000473854 IL33O95760 270 aa2.24□□□□□ -2.05
CCDC39-203ENST00000473854 ZNF12P17014 697 aa2.24□□□□□ -2.05
CCDC39-203ENST00000473854 ACVR2AP27037 513 aa2.24□□□□□ -2.05
CCDC39-203ENST00000473854 IGHMBP2P38935 993 aaKnown RBP2.24□□□□□ -2.05
CCDC39-203ENST00000473854 PHEXP78562 749 aa2.24□□□□□ -2.05
CCDC39-203ENST00000473854 EFHC1Q5JVL4 640 aa2.24□□□□□ -2.05
CCDC39-203ENST00000473854 TMEM240Q5SV17 173 aa2.24□□□□□ -2.05
CCDC39-203ENST00000473854 FAM72AQ5TYM5 149 aa2.24□□□□□ -2.05
CCDC39-203ENST00000473854 FAM72DQ6L9T8 149 aa2.24□□□□□ -2.05
CCDC39-203ENST00000473854 SWSAP1Q6NVH7 229 aa2.24□□□□□ -2.05
CCDC39-203ENST00000473854 FAM72BQ86X60 149 aa2.24□□□□□ -2.05
CCDC39-203ENST00000473854 DDX42Q86XP3 938 aaKnown RBP eCLIP2.24□□□□□ -2.05
CCDC39-203ENST00000473854 YAF2Q8IY57 180 aa2.24□□□□□ -2.05
CCDC39-203ENST00000473854 SPAG16Q8N0X2 631 aa2.24□□□□□ -2.05
CCDC39-203ENST00000473854 POC1AQ8NBT0 407 aa2.24□□□□□ -2.05
CCDC39-203ENST00000473854 OR56A3Q8NH54 315 aa2.24□□□□□ -2.05
CCDC39-203ENST00000473854 PLBD2Q8NHP8 589 aa2.24□□□□□ -2.05
CCDC39-203ENST00000473854 BICD2Q8TD16 824 aa2.24□□□□□ -2.05
CCDC39-203ENST00000473854 TMED6Q8WW62 240 aa2.24□□□□□ -2.05
CCDC39-203ENST00000473854 SCMH1Q96GD3 660 aa2.24□□□□□ -2.05
CCDC39-203ENST00000473854 RXFP3Q9NSD7 469 aa2.24□□□□□ -2.05
CCDC39-203ENST00000473854 TMEM248Q9NWD8 314 aa2.24□□□□□ -2.05
CCDC39-203ENST00000473854 IL36RNQ9UBH0 155 aa2.24□□□□□ -2.05
CCDC39-203ENST00000473854 STAP2Q9UGK3 403 aa2.24□□□□□ -2.05
CCDC39-203ENST00000473854 VPS51Q9UID3 782 aa2.24□□□□□ -2.05
CCDC39-203ENST00000473854 HDAC9Q9UKV0 1011 aa2.24□□□□□ -2.05
CCDC39-203ENST00000473854 VPS4AQ9UN37 437 aa2.24□□□□□ -2.05
CCDC39-203ENST00000473854 TCF19Q9Y242 345 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms