RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 NTPCRQ9BSD7 190 aaKnown RBP5.34□□□□□ -1.55
CD46-213ENST00000471987 ABHD14AQ9BUJ0 271 aa5.34□□□□□ -1.55
CD46-213ENST00000471987 ARHGAP39Q9C0H5 1083 aa5.34□□□□□ -1.55
CD46-213ENST00000471987 SLCO5A1Q9H2Y9 848 aa5.34□□□□□ -1.55
CD46-213ENST00000471987 LAMP3Q9UQV4 416 aa5.34□□□□□ -1.55
CD46-213ENST00000471987 B3GNT3Q9Y2A9 372 aa5.34□□□□□ -1.55
CD46-213ENST00000471987 MAN2B2Q9Y2E5 1009 aa5.34□□□□□ -1.55
CD46-213ENST00000471987 M0QZQ0 153 aa5.33□□□□□ -1.56
CD46-213ENST00000471987 RHODO00212 210 aa5.33□□□□□ -1.56
CD46-213ENST00000471987 NPC1O15118 1278 aa5.33□□□□□ -1.56
CD46-213ENST00000471987 NDST3O95803 873 aa5.33□□□□□ -1.56
CD46-213ENST00000471987 SRGAP2BP0DMP2 458 aa5.33□□□□□ -1.56
CD46-213ENST00000471987 CHRNB1P11230 501 aa5.33□□□□□ -1.56
CD46-213ENST00000471987 PRIM2P49643 509 aa5.33□□□□□ -1.56
CD46-213ENST00000471987 GAD2Q05329 585 aa5.33□□□□□ -1.56
CD46-213ENST00000471987 MAPKAPK3Q16644 382 aa5.33□□□□□ -1.56
CD46-213ENST00000471987 ODF3L2Q3SX64 289 aa5.33□□□□□ -1.56
CD46-213ENST00000471987 C16orf89Q6UX73 402 aa5.33□□□□□ -1.56
CD46-213ENST00000471987 DLK2Q6UY11 383 aa5.33□□□□□ -1.56
CD46-213ENST00000471987 C18orf65Q6ZTR6 163 aa5.33□□□□□ -1.56
CD46-213ENST00000471987 RBMXL3Q8N7X1 1067 aaKnown RBP5.33□□□□□ -1.56
CD46-213ENST00000471987 OR52N4Q8NGI2 321 aa5.33□□□□□ -1.56
CD46-213ENST00000471987 SF3B5Q9BWJ5 86 aaKnown RBP5.33□□□□□ -1.56
CD46-213ENST00000471987 MYLK2Q9H1R3 596 aa5.33□□□□□ -1.56
CD46-213ENST00000471987 PCDHB7Q9Y5E2 793 aa5.33□□□□□ -1.56
CD46-213ENST00000471987 H0YGN5 161 aa5.32□□□□□ -1.56
CD46-213ENST00000471987 PPP6R2O75170 966 aa5.32□□□□□ -1.56
CD46-213ENST00000471987 WNT1P04628 370 aa5.32□□□□□ -1.56
CD46-213ENST00000471987 TGM2P21980 687 aa5.32□□□□□ -1.56
CD46-213ENST00000471987 IFIT5Q13325 482 aaKnown RBP5.32□□□□□ -1.56
CD46-213ENST00000471987 CSHL1Q14406 222 aa5.32□□□□□ -1.56
CD46-213ENST00000471987 RASGRP3Q8IV61 690 aa5.32□□□□□ -1.56
CD46-213ENST00000471987 FAR2Q96K12 515 aa5.32□□□□□ -1.56
CD46-213ENST00000471987 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.32□□□□□ -1.564e-14■□□□□ 8.8
CD46-213ENST00000471987 STARD7Q9NQZ5 370 aa5.32□□□□□ -1.56
CD46-213ENST00000471987 RGL1Q9NZL6 768 aa5.32□□□□□ -1.56
CD46-213ENST00000471987 CA14Q9ULX7 337 aa5.32□□□□□ -1.56
CD46-213ENST00000471987 PCDHA7Q9UN72 937 aa5.32□□□□□ -1.56
CD46-213ENST00000471987 GXYLT2A0PJZ3 443 aa5.31□□□□□ -1.56
CD46-213ENST00000471987 TNFRSF13BO14836 293 aaPredicted RBP5.31□□□□□ -1.56
CD46-213ENST00000471987 CNTN5O94779 1100 aa5.31□□□□□ -1.56
CD46-213ENST00000471987 IFNA2P01563 188 aa5.31□□□□□ -1.56
CD46-213ENST00000471987 ASIC2Q16515 512 aa5.31□□□□□ -1.56
CD46-213ENST00000471987 ARL13BQ3SXY8 428 aa5.31□□□□□ -1.56
CD46-213ENST00000471987 KIAA1755Q5JYT7 1200 aa5.31□□□□□ -1.56
CD46-213ENST00000471987 TTC39AQ5SRH9 613 aa5.31□□□□□ -1.56
CD46-213ENST00000471987 MSANTD2Q6P1R3 559 aa5.31□□□□□ -1.56
CD46-213ENST00000471987 TXLNBQ8N3L3 684 aa5.31□□□□□ -1.56
CD46-213ENST00000471987 IQCF1Q8N6M8 205 aa5.31□□□□□ -1.56
CD46-213ENST00000471987 GLIS1Q8NBF1 620 aa5.31□□□□□ -1.56
CD46-213ENST00000471987 ADPRHL1Q8NDY3 354 aa5.31□□□□□ -1.56
CD46-213ENST00000471987 NPIPB3Q92617 1050 aa5.31□□□□□ -1.56
CD46-213ENST00000471987 ATP2A3Q93084 1043 aa5.31□□□□□ -1.56
CD46-213ENST00000471987 MIB2Q96AX9 1013 aa5.31□□□□□ -1.56
CD46-213ENST00000471987 ZNF347Q96SE7 839 aa5.31□□□□□ -1.56
CD46-213ENST00000471987 GDF15Q99988 308 aa5.31□□□□□ -1.56
CD46-213ENST00000471987 PAAF1Q9BRP4 392 aa5.31□□□□□ -1.56
CD46-213ENST00000471987 VPS33BQ9H267 617 aa5.31□□□□□ -1.56
CD46-213ENST00000471987 KCNK9Q9NPC2 374 aa5.31□□□□□ -1.56
CD46-213ENST00000471987 SHROOM4Q9ULL8 1493 aa5.31□□□□□ -1.56
CD46-213ENST00000471987 RPS10-NUDT3A0A1W2PQS6 291 aa5.3□□□□□ -1.56
CD46-213ENST00000471987 DHHO43323 396 aa5.3□□□□□ -1.56
CD46-213ENST00000471987 ITGA5P08648 1049 aa5.3□□□□□ -1.56
CD46-213ENST00000471987 SLC5A1P13866 664 aa5.3□□□□□ -1.56
CD46-213ENST00000471987 MLH1P40692 756 aa5.3□□□□□ -1.56
CD46-213ENST00000471987 SLC37A1P57057 533 aa5.3□□□□□ -1.56
CD46-213ENST00000471987 ASPHD1Q5U4P2 390 aa5.3□□□□□ -1.56
CD46-213ENST00000471987 WDR93Q6P2C0 686 aa5.3□□□□□ -1.56
CD46-213ENST00000471987 SLC39A5Q6ZMH5 540 aa5.3□□□□□ -1.56
CD46-213ENST00000471987 CYB5R4Q7L1T6 521 aa5.3□□□□□ -1.56
CD46-213ENST00000471987 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.3□□□□□ -1.56
CD46-213ENST00000471987 PAQR4Q8N4S7 273 aaPredicted RBP5.3□□□□□ -1.56
CD46-213ENST00000471987 HELLSQ9NRZ9 838 aa5.3□□□□□ -1.56
CD46-213ENST00000471987 PNMA6EA0A0J9YXQ4 647 aa5.29□□□□□ -1.56
CD46-213ENST00000471987 FAM234BA2RU67 622 aa5.29□□□□□ -1.56
CD46-213ENST00000471987 J3KTA2 159 aa5.29□□□□□ -1.56
CD46-213ENST00000471987 MDM4O15151 490 aa5.29□□□□□ -1.56
CD46-213ENST00000471987 NFATC1O95644 943 aa5.29□□□□□ -1.56
CD46-213ENST00000471987 FMNL3Q8IVF7 1028 aa5.29□□□□□ -1.56
CD46-213ENST00000471987 DCP1BQ8IZD4 617 aaKnown RBP5.29□□□□□ -1.56
CD46-213ENST00000471987 SLC22A17Q8WUG5 538 aa5.29□□□□□ -1.56
CD46-213ENST00000471987 OIT3Q8WWZ8 545 aa5.29□□□□□ -1.56
CD46-213ENST00000471987 TBCBQ99426 244 aa5.29□□□□□ -1.56
CD46-213ENST00000471987 SPAG4Q9NPE6 437 aa5.29□□□□□ -1.56
CD46-213ENST00000471987 FSCN3Q9NQT6 498 aa5.29□□□□□ -1.56
CD46-213ENST00000471987 HIF1ANQ9NWT6 349 aa5.29□□□□□ -1.56
CD46-213ENST00000471987 ICKQ9UPZ9 632 aa5.29□□□□□ -1.56
CD46-213ENST00000471987 FAM50BQ9Y247 325 aa5.29□□□□□ -1.56
CD46-213ENST00000471987 TAF5LO75529 589 aa5.28□□□□□ -1.56
CD46-213ENST00000471987 TNFRSF8P28908 595 aa5.28□□□□□ -1.56
CD46-213ENST00000471987 RFX2P48378 723 aa5.28□□□□□ -1.56
CD46-213ENST00000471987 EGR4Q05215 589 aa5.28□□□□□ -1.56
CD46-213ENST00000471987 PMS2P11Q13670 270 aa5.28□□□□□ -1.56
CD46-213ENST00000471987 COBLL1Q53SF7 1204 aa5.28□□□□□ -1.56
CD46-213ENST00000471987 HIBCHQ6NVY1 386 aaPredicted RBP5.28□□□□□ -1.56
CD46-213ENST00000471987 FBXO38Q6PIJ6 1188 aa5.28□□□□□ -1.56
CD46-213ENST00000471987 SPATA2LQ8IUW3 424 aaPredicted RBP5.28□□□□□ -1.56
CD46-213ENST00000471987 BRI3BPQ8WY22 251 aa5.28□□□□□ -1.56
CD46-213ENST00000471987 INPP5DQ92835 1189 aa5.28□□□□□ -1.56
CD46-213ENST00000471987 FAM84BQ96KN1 310 aaPredicted RBP5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms