RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 PPIL6Q8IXY8 311 aa9.68□□□□□ -0.86
VPS52-216ENST00000471309 IQCKQ8N0W5 287 aa9.68□□□□□ -0.86
VPS52-216ENST00000471309 KRT222Q8N1A0 295 aa9.68□□□□□ -0.86
VPS52-216ENST00000471309 ZCCHC9Q8N567 271 aaKnown RBP9.68□□□□□ -0.86
VPS52-216ENST00000471309 NPWQ8N729 165 aa9.68□□□□□ -0.86
VPS52-216ENST00000471309 TFB1MQ8WVM0 346 aaKnown RBP9.68□□□□□ -0.86
VPS52-216ENST00000471309 PSMG2Q969U7 264 aa9.68□□□□□ -0.86
VPS52-216ENST00000471309 TBC1D31Q96DN5 1066 aa9.68□□□□□ -0.86
VPS52-216ENST00000471309 BTN2A3PQ96KV6 586 aa9.68□□□□□ -0.86
VPS52-216ENST00000471309 ZNF512Q96ME7 567 aaPredicted RBP9.68□□□□□ -0.86
VPS52-216ENST00000471309 PHACTR1Q9C0D0 580 aa9.68□□□□□ -0.86
VPS52-216ENST00000471309 BRD8Q9H0E9 1235 aa9.68□□□□□ -0.86
VPS52-216ENST00000471309 CCSER2Q9H7U1 834 aa9.68□□□□□ -0.86
VPS52-216ENST00000471309 C10orf88Q9H8K7 445 aa9.68□□□□□ -0.86
VPS52-216ENST00000471309 MED4Q9NPJ6 270 aa9.68□□□□□ -0.86
VPS52-216ENST00000471309 UXTQ9UBK9 157 aaPredicted RBP9.68□□□□□ -0.86
VPS52-216ENST00000471309 ZMYND8Q9ULU4 1186 aaPredicted RBP9.68□□□□□ -0.86
VPS52-216ENST00000471309 MAGED2Q9UNF1 606 aaPredicted RBP9.68□□□□□ -0.86
VPS52-216ENST00000471309 ATP8A1Q9Y2Q0 1164 aa9.68□□□□□ -0.86
VPS52-216ENST00000471309 MFHAS1Q9Y4C4 1052 aa9.68□□□□□ -0.86
VPS52-216ENST00000471309 FARP1Q9Y4F1 1045 aaPredicted RBP9.68□□□□□ -0.86
VPS52-216ENST00000471309 LINC01553A4QN01 128 aa9.67□□□□□ -0.86
VPS52-216ENST00000471309 ZNF840PA6NDX5 716 aa9.67□□□□□ -0.86
VPS52-216ENST00000471309 C5orf60A6NFR6 353 aa9.67□□□□□ -0.86
VPS52-216ENST00000471309 C5orf67F2Z3F1 127 aa9.67□□□□□ -0.86
VPS52-216ENST00000471309 GCATO75600 419 aa9.67□□□□□ -0.86
VPS52-216ENST00000471309 MAP3K6O95382 1288 aa9.67□□□□□ -0.86
VPS52-216ENST00000471309 NUDT17P0C025 328 aa9.67□□□□□ -0.86
VPS52-216ENST00000471309 VAV1P15498 845 aa9.67□□□□□ -0.86
VPS52-216ENST00000471309 MX2P20592 715 aa9.67□□□□□ -0.86
VPS52-216ENST00000471309 ACTN2P35609 894 aa9.67□□□□□ -0.86
VPS52-216ENST00000471309 CHKAP35790 457 aa9.67□□□□□ -0.86
VPS52-216ENST00000471309 ATP5C1P36542 298 aaKnown RBP9.67□□□□□ -0.86
VPS52-216ENST00000471309 PMS2P54278 862 aa9.67□□□□□ -0.86
VPS52-216ENST00000471309 MLLT6P55198 1093 aaPredicted RBP9.67□□□□□ -0.86
VPS52-216ENST00000471309 ZNF33AQ06730 810 aa9.67□□□□□ -0.86
VPS52-216ENST00000471309 GALNT2Q10471 571 aa9.67□□□□□ -0.86
VPS52-216ENST00000471309 HECTD3Q5T447 861 aa9.67□□□□□ -0.86
VPS52-216ENST00000471309 ARTNQ5T4W7 220 aa9.67□□□□□ -0.86
VPS52-216ENST00000471309 NUGGCQ68CJ6 796 aa9.67□□□□□ -0.86
VPS52-216ENST00000471309 HEATR6Q6AI08 1181 aaKnown RBP9.67□□□□□ -0.86
VPS52-216ENST00000471309 LILRA6Q6PI73 481 aa9.67□□□□□ -0.86
VPS52-216ENST00000471309 TRMT10CQ7L0Y3 403 aaKnown RBP9.67□□□□□ -0.86
VPS52-216ENST00000471309 MIB1Q86YT6 1006 aa9.67□□□□□ -0.86
VPS52-216ENST00000471309 ATP6V0D2Q8N8Y2 350 aa9.67□□□□□ -0.86
VPS52-216ENST00000471309 NAT8LQ8N9F0 302 aa9.67□□□□□ -0.86
VPS52-216ENST00000471309 UBLCP1Q8WVY7 318 aaPredicted RBP9.67□□□□□ -0.86
VPS52-216ENST00000471309 HTR3CQ8WXA8 447 aa9.67□□□□□ -0.86
VPS52-216ENST00000471309 CPT1BQ92523 772 aa9.67□□□□□ -0.86
VPS52-216ENST00000471309 PRCCQ92733 491 aaPredicted RBP9.67□□□□□ -0.86
VPS52-216ENST00000471309 HDAC11Q96DB2 347 aa9.67□□□□□ -0.86
VPS52-216ENST00000471309 PKNOX2Q96KN3 472 aa9.67□□□□□ -0.86
VPS52-216ENST00000471309 KLHL5Q96PQ7 755 aa9.67□□□□□ -0.86
VPS52-216ENST00000471309 RUFY1Q96T51 708 aa9.67□□□□□ -0.86
VPS52-216ENST00000471309 TCF25Q9BQ70 676 aa9.67□□□□□ -0.86
VPS52-216ENST00000471309 FERMT1Q9BQL6 677 aa9.67□□□□□ -0.86
VPS52-216ENST00000471309 EMILIN2Q9BXX0 1053 aa9.67□□□□□ -0.86
VPS52-216ENST00000471309 PABPC3Q9H361 631 aaKnown RBP9.67□□□□□ -0.86
VPS52-216ENST00000471309 CATSPERBQ9H7T0 1116 aa9.67□□□□□ -0.86
VPS52-216ENST00000471309 TRPM5Q9NZQ8 1165 aa9.67□□□□□ -0.86
VPS52-216ENST00000471309 SLC12A6Q9UHW9 1150 aa9.67□□□□□ -0.86
VPS52-216ENST00000471309 DNMT3LQ9UJW3 386 aa9.67□□□□□ -0.86
VPS52-216ENST00000471309 ASB3Q9Y575 518 aa9.67□□□□□ -0.86
VPS52-216ENST00000471309 SNX10Q9Y5X0 201 aa9.67□□□□□ -0.86
VPS52-216ENST00000471309 HS3ST4Q9Y661 456 aa9.67□□□□□ -0.86
VPS52-216ENST00000471309 IGLV3-10A0A075B6K4 115 aa9.66□□□□□ -0.86
VPS52-216ENST00000471309 A0A0A0MRY4 1105 aa9.66□□□□□ -0.86
VPS52-216ENST00000471309 SLC12A8A0AV02 714 aa9.66□□□□□ -0.86
VPS52-216ENST00000471309 WASH4PA8MWX3 477 aa9.66□□□□□ -0.86
VPS52-216ENST00000471309 E9PAM4 449 aa9.66□□□□□ -0.86
VPS52-216ENST00000471309 AGPSO00116 658 aa9.66□□□□□ -0.86
VPS52-216ENST00000471309 CHADO15335 359 aa9.66□□□□□ -0.86
VPS52-216ENST00000471309 MTSS1O43312 755 aa9.66□□□□□ -0.86
VPS52-216ENST00000471309 TGM5O43548 720 aa9.66□□□□□ -0.86
VPS52-216ENST00000471309 STK10O94804 968 aaKnown RBP9.66□□□□□ -0.86
VPS52-216ENST00000471309 TBX18O95935 607 aa9.66□□□□□ -0.86
VPS52-216ENST00000471309 MOCS2O96007 188 aaPredicted RBP9.66□□□□□ -0.86
VPS52-216ENST00000471309 C1RP00736 705 aa9.66□□□□□ -0.86
VPS52-216ENST00000471309 CA8P35219 290 aa9.66□□□□□ -0.86
VPS52-216ENST00000471309 GGCXP38435 758 aa9.66□□□□□ -0.86
VPS52-216ENST00000471309 MAGEA6P43360 314 aa9.66□□□□□ -0.86
VPS52-216ENST00000471309 BASP1P80723 227 aaKnown RBP9.66□□□□□ -0.86
VPS52-216ENST00000471309 PPIDQ08752 370 aaKnown RBP9.66□□□□□ -0.86
VPS52-216ENST00000471309 TAF12Q16514 161 aa9.66□□□□□ -0.86
VPS52-216ENST00000471309 HSP90B2PQ58FF3 399 aa9.66□□□□□ -0.86
VPS52-216ENST00000471309 MS4A13Q5J8X5 152 aa9.66□□□□□ -0.86
VPS52-216ENST00000471309 PIK3R6Q5UE93 754 aa9.66□□□□□ -0.86
VPS52-216ENST00000471309 CCDC149Q6ZUS6 474 aa9.66□□□□□ -0.86
VPS52-216ENST00000471309 TMC7Q7Z402 723 aa9.66□□□□□ -0.86
VPS52-216ENST00000471309 ZNF683Q8IZ20 524 aa9.66□□□□□ -0.86
VPS52-216ENST00000471309 LZTR1Q8N653 840 aa9.66□□□□□ -0.86
VPS52-216ENST00000471309 PLD4Q96BZ4 506 aa9.66□□□□□ -0.86
VPS52-216ENST00000471309 SPATA13Q96N96 652 aa9.66□□□□□ -0.86
VPS52-216ENST00000471309 ZIM3Q96PE6 472 aa9.66□□□□□ -0.86
VPS52-216ENST00000471309 LGMNQ99538 433 aa9.66□□□□□ -0.86
VPS52-216ENST00000471309 SH3GL2Q99962 352 aa9.66□□□□□ -0.86
VPS52-216ENST00000471309 KLC2Q9H0B6 622 aa9.66□□□□□ -0.86
VPS52-216ENST00000471309 SIK2Q9H0K1 926 aa9.66□□□□□ -0.86
VPS52-216ENST00000471309 EPB41L4BQ9H329 900 aa9.66□□□□□ -0.86
VPS52-216ENST00000471309 CDC42EP4Q9H3Q1 356 aaKnown RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms