RNA–Protein interactions for RNA: ENST00000470824.1

PRPF3-204, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 898 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-204ENST00000470824 MT-CO3P00414 261 aa4.5□□□□□ -1.69
PRPF3-204ENST00000470824 ADH4P08319 380 aa4.5□□□□□ -1.69
PRPF3-204ENST00000470824 CSF1P09603 554 aa4.5□□□□□ -1.69
PRPF3-204ENST00000470824 ELFN1P0C7U0 828 aa4.5□□□□□ -1.69
PRPF3-204ENST00000470824 ACP5P13686 325 aa4.5□□□□□ -1.69
PRPF3-204ENST00000470824 APEHP13798 732 aaKnown RBP4.5□□□□□ -1.69
PRPF3-204ENST00000470824 IGFBP2P18065 325 aa4.5□□□□□ -1.69
PRPF3-204ENST00000470824 SLC8A1P32418 973 aa4.5□□□□□ -1.69
PRPF3-204ENST00000470824 RXRGP48443 463 aa4.5□□□□□ -1.69
PRPF3-204ENST00000470824 WDR5P61964 334 aaKnown RBP4.5□□□□□ -1.69
PRPF3-204ENST00000470824 TBL3Q12788 808 aaKnown RBP4.5□□□□□ -1.69
PRPF3-204ENST00000470824 ZNF169Q14929 603 aaPredicted RBP4.5□□□□□ -1.69
PRPF3-204ENST00000470824 CNGA3Q16281 694 aa4.5□□□□□ -1.69
PRPF3-204ENST00000470824 BAK1Q16611 211 aa4.5□□□□□ -1.69
PRPF3-204ENST00000470824 LAIR1Q6GTX8 287 aa4.5□□□□□ -1.69
PRPF3-204ENST00000470824 FAM180BQ6P0A1 224 aa4.5□□□□□ -1.69
PRPF3-204ENST00000470824 NAPRTQ6XQN6 538 aa4.5□□□□□ -1.69
PRPF3-204ENST00000470824 KYAT3Q6YP21 454 aaKnown RBP4.5□□□□□ -1.69
PRPF3-204ENST00000470824 SLC39A5Q6ZMH5 540 aa4.5□□□□□ -1.69
PRPF3-204ENST00000470824 SLC29A4Q7RTT9 530 aa4.5□□□□□ -1.69
PRPF3-204ENST00000470824 GRASPQ7Z6J2 395 aaPredicted RBP4.5□□□□□ -1.69
PRPF3-204ENST00000470824 LAS2Q8IYD9 372 aa4.5□□□□□ -1.69
PRPF3-204ENST00000470824 LINC01465Q8N7H1 131 aa4.5□□□□□ -1.69
PRPF3-204ENST00000470824 ADPRHL1Q8NDY3 354 aa4.5□□□□□ -1.69
PRPF3-204ENST00000470824 RFFLQ8WZ73 363 aa4.5□□□□□ -1.69
PRPF3-204ENST00000470824 AKAP1Q92667 903 aaKnown RBP eCLIP4.5□□□□□ -1.69
PRPF3-204ENST00000470824 MMS19Q96T76 1030 aa4.5□□□□□ -1.69
PRPF3-204ENST00000470824 HTATIP2Q9BUP3 242 aa4.5□□□□□ -1.69
PRPF3-204ENST00000470824 HERC2P3Q9BVR0 1158 aa4.5□□□□□ -1.69
PRPF3-204ENST00000470824 SYNPO2LQ9H987 977 aa4.5□□□□□ -1.69
PRPF3-204ENST00000470824 GAR1Q9NY12 217 aaKnown RBP4.5□□□□□ -1.69
PRPF3-204ENST00000470824 FOXJ2Q9P0K8 574 aa4.5□□□□□ -1.69
PRPF3-204ENST00000470824 CNOT7Q9UIV1 285 aaKnown RBP4.5□□□□□ -1.69
PRPF3-204ENST00000470824 COPG1Q9Y678 874 aaKnown RBP4.5□□□□□ -1.69
PRPF3-204ENST00000470824 SPATA31A1Q5TZJ5 1347 aa4.49□□□□□ -1.69
PRPF3-204ENST00000470824 NACADO15069 1562 aa4.49□□□□□ -1.69
PRPF3-204ENST00000470824 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.49□□□□□ -1.69
PRPF3-204ENST00000470824 NPIPB8E9PQR5 432 aa4.49□□□□□ -1.69
PRPF3-204ENST00000470824 CLIC1O00299 241 aa4.49□□□□□ -1.69
PRPF3-204ENST00000470824 ZNF202O95125 648 aa4.49□□□□□ -1.69
PRPF3-204ENST00000470824 WEE2P0C1S8 567 aa4.49□□□□□ -1.69
PRPF3-204ENST00000470824 DRD4P21917 467 aa4.49□□□□□ -1.69
PRPF3-204ENST00000470824 EIF5P55010 431 aaKnown RBP4.49□□□□□ -1.69
PRPF3-204ENST00000470824 CASP6P55212 293 aa4.49□□□□□ -1.69
PRPF3-204ENST00000470824 CYP4F2P78329 520 aa4.49□□□□□ -1.69
PRPF3-204ENST00000470824 HOXA4Q00056 320 aaPredicted RBP4.49□□□□□ -1.69
PRPF3-204ENST00000470824 CDK18Q07002 472 aa4.49□□□□□ -1.69
PRPF3-204ENST00000470824 GOLGA8FQ08AF8 430 aa4.49□□□□□ -1.69
PRPF3-204ENST00000470824 ALKBH1Q13686 389 aaKnown RBP4.49□□□□□ -1.69
PRPF3-204ENST00000470824 MFSD13AQ14CX5 517 aa4.49□□□□□ -1.69
PRPF3-204ENST00000470824 GPR68Q15743 365 aa4.49□□□□□ -1.69
PRPF3-204ENST00000470824 RUNDC3AQ59EK9 446 aa4.49□□□□□ -1.69
PRPF3-204ENST00000470824 SLC9C2Q5TAH2 1124 aa4.49□□□□□ -1.69
PRPF3-204ENST00000470824 ACAD10Q6JQN1 1059 aa4.49□□□□□ -1.69
PRPF3-204ENST00000470824 KIAA1324Q6UXG2 1013 aaKnown RBP4.49□□□□□ -1.69
PRPF3-204ENST00000470824 DSTYKQ6XUX3 929 aa4.49□□□□□ -1.69
PRPF3-204ENST00000470824 C1orf122Q6ZSJ8 110 aa4.49□□□□□ -1.69
PRPF3-204ENST00000470824 BCDIN3DQ7Z5W3 292 aaKnown RBP4.49□□□□□ -1.69
PRPF3-204ENST00000470824 RASAL3Q86YV0 1011 aa4.49□□□□□ -1.69
PRPF3-204ENST00000470824 MAFAQ8NHW3 353 aaPredicted RBP4.49□□□□□ -1.69
PRPF3-204ENST00000470824 ZUFSPQ96AP4 578 aa4.49□□□□□ -1.69
PRPF3-204ENST00000470824 DAZAP1Q96EP5 407 aaKnown RBP4.49□□□□□ -1.69
PRPF3-204ENST00000470824 RNF125Q96EQ8 232 aa4.49□□□□□ -1.69
PRPF3-204ENST00000470824 MASTLQ96GX5 879 aa4.49□□□□□ -1.69
PRPF3-204ENST00000470824 KAZALD1Q96I82 304 aa4.49□□□□□ -1.69
PRPF3-204ENST00000470824 CCDC17Q96LX7 622 aa4.49□□□□□ -1.69
PRPF3-204ENST00000470824 AGXT2Q9BYV1 514 aa4.49□□□□□ -1.69
PRPF3-204ENST00000470824 ARHGAP39Q9C0H5 1083 aa4.49□□□□□ -1.69
PRPF3-204ENST00000470824 CLPBQ9H078 707 aa4.49□□□□□ -1.69
PRPF3-204ENST00000470824 TAOK3Q9H2K8 898 aa4.49□□□□□ -1.69
PRPF3-204ENST00000470824 ACAD9Q9H845 621 aa4.49□□□□□ -1.69
PRPF3-204ENST00000470824 SFXN1Q9H9B4 322 aa4.49□□□□□ -1.69
PRPF3-204ENST00000470824 MTMR4Q9NYA4 1195 aa4.49□□□□□ -1.69
PRPF3-204ENST00000470824 SEMA5BQ9P283 1151 aa4.49□□□□□ -1.69
PRPF3-204ENST00000470824 SWAP70Q9UH65 585 aa4.49□□□□□ -1.69
PRPF3-204ENST00000470824 HSF4Q9ULV5 492 aa4.49□□□□□ -1.69
PRPF3-204ENST00000470824 B3GNT3Q9Y2A9 372 aa4.49□□□□□ -1.69
PRPF3-204ENST00000470824 ENTPD2Q9Y5L3 495 aa4.49□□□□□ -1.69
PRPF3-204ENST00000470824 CYP46A1Q9Y6A2 500 aa4.49□□□□□ -1.69
PRPF3-204ENST00000470824 GRID2IPA4D2P6 1211 aa4.48□□□□□ -1.69
PRPF3-204ENST00000470824 H3BNC9 293 aa4.48□□□□□ -1.69
PRPF3-204ENST00000470824 DHX16O60231 1041 aaKnown RBP4.48□□□□□ -1.69
PRPF3-204ENST00000470824 TULP3O75386 442 aa4.48□□□□□ -1.69
PRPF3-204ENST00000470824 BAIAP3O94812 1187 aa4.48□□□□□ -1.69
PRPF3-204ENST00000470824 KAT7O95251 611 aa4.48□□□□□ -1.69
PRPF3-204ENST00000470824 SFPQP23246 707 aaKnown RBP eCLIP4.48□□□□□ -1.69
PRPF3-204ENST00000470824 PRKCHP24723 683 aa4.48□□□□□ -1.69
PRPF3-204ENST00000470824 NDUFS1P28331 727 aa4.48□□□□□ -1.69
PRPF3-204ENST00000470824 MCM7P33993 719 aa4.48□□□□□ -1.69
PRPF3-204ENST00000470824 HOXD12P35452 270 aa4.48□□□□□ -1.69
PRPF3-204ENST00000470824 RARRES1P49788 294 aa4.48□□□□□ -1.69
PRPF3-204ENST00000470824 RPP30P78346 268 aaKnown RBP4.48□□□□□ -1.69
PRPF3-204ENST00000470824 GAB1Q13480 694 aa4.48□□□□□ -1.69
PRPF3-204ENST00000470824 NFIL3Q16649 462 aa4.48□□□□□ -1.69
PRPF3-204ENST00000470824 GLE1Q53GS7 698 aaKnown RBP4.48□□□□□ -1.69
PRPF3-204ENST00000470824 HECTD2Q5U5R9 776 aa4.48□□□□□ -1.69
PRPF3-204ENST00000470824 CEP85Q6P2H3 762 aa4.48□□□□□ -1.69
PRPF3-204ENST00000470824 TMEM65Q6PI78 240 aa4.48□□□□□ -1.69
PRPF3-204ENST00000470824 VSTM1Q6UX27 236 aa4.48□□□□□ -1.69
PRPF3-204ENST00000470824 TRIM72Q6ZMU5 477 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms