RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 SNX27Q96L92 541 aa4.77□□□□□ -1.65
COL9A1-206ENST00000470652 THUMPD2Q9BTF0 503 aaKnown RBP4.77□□□□□ -1.65
COL9A1-206ENST00000470652 MAFFQ9ULX9 164 aa4.77□□□□□ -1.65
COL9A1-206ENST00000470652 BLMP54132 1417 aaPredicted RBP4.77□□□□□ -1.65
COL9A1-206ENST00000470652 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.77□□□□□ -1.65
COL9A1-206ENST00000470652 BRD4O60885 1362 aaPredicted RBP4.77□□□□□ -1.65
COL9A1-206ENST00000470652 INSRP06213 1382 aa4.77□□□□□ -1.65
COL9A1-206ENST00000470652 ZNF804BA4D1E1 1349 aa4.76□□□□□ -1.65
COL9A1-206ENST00000470652 WDR17Q8IZU2 1322 aa4.76□□□□□ -1.65
COL9A1-206ENST00000470652 WDR47O94967 919 aa4.76□□□□□ -1.65
COL9A1-206ENST00000470652 PRKAR2BP31323 418 aa4.76□□□□□ -1.65
COL9A1-206ENST00000470652 HTR7P34969 479 aa4.76□□□□□ -1.65
COL9A1-206ENST00000470652 TM4SF4P48230 202 aa4.76□□□□□ -1.65
COL9A1-206ENST00000470652 DGKQP52824 942 aa4.76□□□□□ -1.65
COL9A1-206ENST00000470652 SSBP2P81877 361 aaPredicted RBP4.76□□□□□ -1.65
COL9A1-206ENST00000470652 DEUP1Q05D60 604 aa4.76□□□□□ -1.65
COL9A1-206ENST00000470652 GPS1Q13098 491 aa4.76□□□□□ -1.65
COL9A1-206ENST00000470652 DCTN1Q14203 1278 aa4.76□□□□□ -1.65
COL9A1-206ENST00000470652 LARS2Q15031 903 aaKnown RBP4.76□□□□□ -1.65
COL9A1-206ENST00000470652 MTX3Q5HYI7 312 aa4.76□□□□□ -1.65
COL9A1-206ENST00000470652 FAM209BQ5JX69 171 aa4.76□□□□□ -1.65
COL9A1-206ENST00000470652 PAPD7Q5XG87 772 aaKnown RBP4.76□□□□□ -1.65
COL9A1-206ENST00000470652 CCSAPQ6IQ19 270 aaPredicted RBP4.76□□□□□ -1.65
COL9A1-206ENST00000470652 HIBCHQ6NVY1 386 aaPredicted RBP4.76□□□□□ -1.65
COL9A1-206ENST00000470652 MIS18BP1Q6P0N0 1132 aa4.76□□□□□ -1.65
COL9A1-206ENST00000470652 CRTC1Q6UUV9 634 aa4.76□□□□□ -1.65
COL9A1-206ENST00000470652 VSTM1Q6UX27 236 aa4.76□□□□□ -1.65
COL9A1-206ENST00000470652 PKD1L3Q7Z443 1732 aa4.76□□□□□ -1.65
COL9A1-206ENST00000470652 YTHDF3Q7Z739 585 aaKnown RBP4.76□□□□□ -1.65
COL9A1-206ENST00000470652 FAM71DQ8N9W8 422 aa4.76□□□□□ -1.65
COL9A1-206ENST00000470652 KCNH5Q8NCM2 988 aa4.76□□□□□ -1.65
COL9A1-206ENST00000470652 MAFAQ8NHW3 353 aaPredicted RBP4.76□□□□□ -1.65
COL9A1-206ENST00000470652 EDC3Q96F86 508 aaKnown RBP4.76□□□□□ -1.65
COL9A1-206ENST00000470652 CINPQ9BW66 212 aaPredicted RBP4.76□□□□□ -1.65
COL9A1-206ENST00000470652 SLC29A3Q9BZD2 475 aa4.76□□□□□ -1.65
COL9A1-206ENST00000470652 AS3MTQ9HBK9 375 aa4.76□□□□□ -1.65
COL9A1-206ENST00000470652 ARNT2Q9HBZ2 717 aa4.76□□□□□ -1.65
COL9A1-206ENST00000470652 ASAP1Q9ULH1 1129 aa4.76□□□□□ -1.65
COL9A1-206ENST00000470652 DOT1LQ8TEK3 1739 aa4.75□□□□□ -1.65
COL9A1-206ENST00000470652 PARP4Q9UKK3 1724 aaKnown RBP4.75□□□□□ -1.65
COL9A1-206ENST00000470652 ITGB4P16144 1822 aa4.75□□□□□ -1.65
COL9A1-206ENST00000470652 CYP2D7A0A087X1C5 515 aa4.75□□□□□ -1.65
COL9A1-206ENST00000470652 CLIC1O00299 241 aa4.75□□□□□ -1.65
COL9A1-206ENST00000470652 FGF18O76093 207 aa4.75□□□□□ -1.65
COL9A1-206ENST00000470652 MYL3P08590 195 aa4.75□□□□□ -1.65
COL9A1-206ENST00000470652 SLC5A2P31639 672 aa4.75□□□□□ -1.65
COL9A1-206ENST00000470652 AK2P54819 239 aa4.75□□□□□ -1.65
COL9A1-206ENST00000470652 TBX4P57082 545 aa4.75□□□□□ -1.65
COL9A1-206ENST00000470652 GPC5P78333 572 aa4.75□□□□□ -1.65
COL9A1-206ENST00000470652 TXNL4AP83876 142 aaKnown RBP4.75□□□□□ -1.65
COL9A1-206ENST00000470652 CCDC15Q0P6D6 951 aa4.75□□□□□ -1.65
COL9A1-206ENST00000470652 PICALMQ13492 652 aa4.75□□□□□ -1.65
COL9A1-206ENST00000470652 FHL3Q13643 280 aa4.75□□□□□ -1.65
COL9A1-206ENST00000470652 KCNB1Q14721 858 aa4.75□□□□□ -1.65
COL9A1-206ENST00000470652 ACOX1Q15067 660 aa4.75□□□□□ -1.65
COL9A1-206ENST00000470652 ZNF626Q68DY1 528 aa4.75□□□□□ -1.65
COL9A1-206ENST00000470652 RANBP10Q6VN20 620 aa4.75□□□□□ -1.65
COL9A1-206ENST00000470652 KIAA0408Q6ZU52 694 aa4.75□□□□□ -1.65
COL9A1-206ENST00000470652 TOM1L2Q6ZVM7 507 aa4.75□□□□□ -1.65
COL9A1-206ENST00000470652 P3H2Q8IVL5 708 aa4.75□□□□□ -1.65
COL9A1-206ENST00000470652 TXLNBQ8N3L3 684 aa4.75□□□□□ -1.65
COL9A1-206ENST00000470652 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.75□□□□□ -1.65
COL9A1-206ENST00000470652 ZNF398Q8TD17 642 aa4.75□□□□□ -1.65
COL9A1-206ENST00000470652 SH2D3AQ9BRG2 576 aa4.75□□□□□ -1.65
COL9A1-206ENST00000470652 QTRT1Q9BXR0 403 aaKnown RBP4.75□□□□□ -1.65
COL9A1-206ENST00000470652 USP29Q9HBJ7 922 aa4.75□□□□□ -1.65
COL9A1-206ENST00000470652 GJB4Q9NTQ9 266 aa4.75□□□□□ -1.65
COL9A1-206ENST00000470652 FZD4Q9ULV1 537 aa4.75□□□□□ -1.65
COL9A1-206ENST00000470652 MAN2B2Q9Y2E5 1009 aa4.75□□□□□ -1.65
COL9A1-206ENST00000470652 THSD7AQ9UPZ6 1657 aa4.75□□□□□ -1.65
COL9A1-206ENST00000470652 RTL1A6NKG5 1358 aa4.75□□□□□ -1.65
COL9A1-206ENST00000470652 KAT6AQ92794 2004 aa4.75□□□□□ -1.65
COL9A1-206ENST00000470652 IGSF1Q8N6C5 1336 aa4.74□□□□□ -1.65
COL9A1-206ENST00000470652 ARHGEF17Q96PE2 2063 aaPredicted RBP4.74□□□□□ -1.65
COL9A1-206ENST00000470652 DISP2A7MBM2 1401 aa4.74□□□□□ -1.65
COL9A1-206ENST00000470652 ATRNO75882 1429 aa4.74□□□□□ -1.65
COL9A1-206ENST00000470652 NCAPD2Q15021 1401 aa4.74□□□□□ -1.65
COL9A1-206ENST00000470652 SCN11AQ9UI33 1791 aa4.74□□□□□ -1.65
COL9A1-206ENST00000470652 WDR91A4D1P6 747 aa4.74□□□□□ -1.65
COL9A1-206ENST00000470652 RASA4BC9J798 803 aa4.74□□□□□ -1.65
COL9A1-206ENST00000470652 RASA4O43374 803 aa4.74□□□□□ -1.65
COL9A1-206ENST00000470652 RNF8O76064 485 aa4.74□□□□□ -1.65
COL9A1-206ENST00000470652 HMGB1P09429 215 aaKnown RBP4.74□□□□□ -1.65
COL9A1-206ENST00000470652 ARP10275 920 aa4.74□□□□□ -1.65
COL9A1-206ENST00000470652 ATF7P17544 494 aaPredicted RBP4.74□□□□□ -1.65
COL9A1-206ENST00000470652 TNFSF4P23510 183 aa4.74□□□□□ -1.65
COL9A1-206ENST00000470652 YY1P25490 414 aa4.74□□□□□ -1.65
COL9A1-206ENST00000470652 MST1P26927 711 aa4.74□□□□□ -1.65
COL9A1-206ENST00000470652 GABRB3P28472 473 aa4.74□□□□□ -1.65
COL9A1-206ENST00000470652 MTAPQ13126 283 aa4.74□□□□□ -1.65
COL9A1-206ENST00000470652 DNASE1L3Q13609 305 aa4.74□□□□□ -1.65
COL9A1-206ENST00000470652 MFSD13AQ14CX5 517 aa4.74□□□□□ -1.65
COL9A1-206ENST00000470652 DAZAP2Q15038 168 aaPredicted RBP4.74□□□□□ -1.65
COL9A1-206ENST00000470652 LONRF1Q17RB8 773 aa4.74□□□□□ -1.65
COL9A1-206ENST00000470652 MTHFSDQ2M296 383 aaKnown RBP4.74□□□□□ -1.65
COL9A1-206ENST00000470652 SUPT20HL1Q3ZLR7 823 aa4.74□□□□□ -1.65
COL9A1-206ENST00000470652 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.74□□□□□ -1.65
COL9A1-206ENST00000470652 MORN5Q5VZ52 161 aa4.74□□□□□ -1.65
COL9A1-206ENST00000470652 ABLIM2Q6H8Q1 611 aa4.74□□□□□ -1.65
COL9A1-206ENST00000470652 GRHL2Q6ISB3 625 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms