RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 GPSM3Q9Y4H4 160 aa12.77□□□□□ -0.37
HDAC3-204ENST00000469207 TMEM131Q92545 1883 aa12.76□□□□□ -0.37
HDAC3-204ENST00000469207 ADAMTS20P59510 1910 aa12.76□□□□□ -0.37
HDAC3-204ENST00000469207 PTPRBP23467 1997 aa12.76□□□□□ -0.37
HDAC3-204ENST00000469207 H0Y8X5 98 aa12.76□□□□□ -0.37
HDAC3-204ENST00000469207 STX10O60499 249 aa12.76□□□□□ -0.37
HDAC3-204ENST00000469207 SEMA4FO95754 770 aa12.76□□□□□ -0.37
HDAC3-204ENST00000469207 DNTTP04053 509 aa12.76□□□□□ -0.37
HDAC3-204ENST00000469207 FYNP06241 537 aa12.76□□□□□ -0.37
HDAC3-204ENST00000469207 DLDP09622 509 aaKnown RBP12.76□□□□□ -0.37
HDAC3-204ENST00000469207 ZNF883P0CG24 379 aa12.76□□□□□ -0.37
HDAC3-204ENST00000469207 CTSOP43234 321 aaPredicted RBP12.76□□□□□ -0.37
HDAC3-204ENST00000469207 COL28A1Q2UY09 1125 aa12.76□□□□□ -0.37
HDAC3-204ENST00000469207 FSCBQ5H9T9 825 aa12.76□□□□□ -0.37
HDAC3-204ENST00000469207 IL27RAQ6UWB1 636 aa12.76□□□□□ -0.37
HDAC3-204ENST00000469207 CFAP52Q8N1V2 620 aa12.76□□□□□ -0.37
HDAC3-204ENST00000469207 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.76□□□□□ -0.37
HDAC3-204ENST00000469207 SLC35C1Q96A29 364 aa12.76□□□□□ -0.37
HDAC3-204ENST00000469207 LMLNQ96KR4 655 aa12.76□□□□□ -0.37
HDAC3-204ENST00000469207 MIS12Q9H081 205 aa12.76□□□□□ -0.37
HDAC3-204ENST00000469207 BTBD1Q9H0C5 482 aa12.76□□□□□ -0.37
HDAC3-204ENST00000469207 CCDC86Q9H6F5 360 aaKnown RBP12.76□□□□□ -0.37
HDAC3-204ENST00000469207 KIAA1522Q9P206 1035 aaPredicted RBP12.76□□□□□ -0.37
HDAC3-204ENST00000469207 SERGEFQ9UGK8 458 aa12.76□□□□□ -0.37
HDAC3-204ENST00000469207 INTS6Q9UL03 887 aaKnown RBP12.76□□□□□ -0.37
HDAC3-204ENST00000469207 RAXQ9Y2V3 346 aa12.76□□□□□ -0.37
HDAC3-204ENST00000469207 PCDHB4Q9Y5E5 795 aa12.76□□□□□ -0.37
HDAC3-204ENST00000469207 WNT9AO14904 365 aa12.75□□□□□ -0.37
HDAC3-204ENST00000469207 ACSL4O60488 711 aa12.75□□□□□ -0.37
HDAC3-204ENST00000469207 SIN3BO75182 1162 aa12.75□□□□□ -0.37
HDAC3-204ENST00000469207 IGLV3-27P01718 113 aa12.75□□□□□ -0.37
HDAC3-204ENST00000469207 IGHV4-34P06331 123 aa12.75□□□□□ -0.37
HDAC3-204ENST00000469207 POLR2EP19388 210 aaKnown RBP12.75□□□□□ -0.37
HDAC3-204ENST00000469207 BRD2P25440 801 aaKnown RBP12.75□□□□□ -0.37
HDAC3-204ENST00000469207 ATRXP46100 2492 aa12.75□□□□□ -0.37
HDAC3-204ENST00000469207 AFF3P51826 1226 aaKnown RBP12.75□□□□□ -0.37
HDAC3-204ENST00000469207 CLDN6P56747 220 aa12.75□□□□□ -0.37
HDAC3-204ENST00000469207 TBX4P57082 545 aa12.75□□□□□ -0.37
HDAC3-204ENST00000469207 RPS24P62847 133 aaKnown RBP12.75□□□□□ -0.37
HDAC3-204ENST00000469207 FKBP3Q00688 224 aaKnown RBP12.75□□□□□ -0.37
HDAC3-204ENST00000469207 ZNF658Q5TYW1 1059 aaPredicted RBP12.75□□□□□ -0.37
HDAC3-204ENST00000469207 LCLAT1Q6UWP7 414 aa12.75□□□□□ -0.37
HDAC3-204ENST00000469207 RRAGAQ7L523 313 aa12.75□□□□□ -0.37
HDAC3-204ENST00000469207 TMPRSS7Q7RTY8 843 aa12.75□□□□□ -0.37
HDAC3-204ENST00000469207 DHX40Q8IX18 779 aaKnown RBP12.75□□□□□ -0.37
HDAC3-204ENST00000469207 AHI1Q8N157 1196 aa12.75□□□□□ -0.37
HDAC3-204ENST00000469207 CARNMT1Q8N4J0 409 aa12.75□□□□□ -0.37
HDAC3-204ENST00000469207 ADAM32Q8TC27 787 aa12.75□□□□□ -0.37
HDAC3-204ENST00000469207 WFIKKN2Q8TEU8 576 aa12.75□□□□□ -0.37
HDAC3-204ENST00000469207 PRICKLE1Q96MT3 831 aaPredicted RBP12.75□□□□□ -0.37
HDAC3-204ENST00000469207 SCAND2PQ9GZW5 306 aaPredicted RBP12.75□□□□□ -0.37
HDAC3-204ENST00000469207 CNGB3Q9NQW8 809 aa12.75□□□□□ -0.37
HDAC3-204ENST00000469207 XPO7Q9UIA9 1087 aaKnown RBP12.75□□□□□ -0.37
HDAC3-204ENST00000469207 NAALADL1Q9UQQ1 740 aa12.75□□□□□ -0.37
HDAC3-204ENST00000469207 BAHCC1Q9P281 2608 aa12.75□□□□□ -0.37
HDAC3-204ENST00000469207 CABIN1Q9Y6J0 2220 aa12.74□□□□□ -0.37
HDAC3-204ENST00000469207 MUC22E2RYF6 1773 aaPredicted RBP12.74□□□□□ -0.37
HDAC3-204ENST00000469207 TRABD2BA6NFA1 517 aa12.74□□□□□ -0.37
HDAC3-204ENST00000469207 TTC34A8MYJ7 566 aa12.74□□□□□ -0.37
HDAC3-204ENST00000469207 M0QYV0 167 aa12.74□□□□□ -0.37
HDAC3-204ENST00000469207 CBX4O00257 560 aa12.74□□□□□ -0.37
HDAC3-204ENST00000469207 FLRT2O43155 660 aa12.74□□□□□ -0.37
HDAC3-204ENST00000469207 DKK1O94907 266 aa12.74□□□□□ -0.37
HDAC3-204ENST00000469207 LTFP02788 710 aa12.74□□□□□ -0.37
HDAC3-204ENST00000469207 WNT1P04628 370 aa12.74□□□□□ -0.37
HDAC3-204ENST00000469207 ATP5BP06576 529 aaKnown RBP12.74□□□□□ -0.37
HDAC3-204ENST00000469207 SETSIPP0DME0 302 aa12.74□□□□□ -0.37
HDAC3-204ENST00000469207 CD44P16070 742 aaKnown RBP12.74□□□□□ -0.37
HDAC3-204ENST00000469207 CD27P26842 260 aa12.74□□□□□ -0.37
HDAC3-204ENST00000469207 FMO5P49326 533 aa12.74□□□□□ -0.37
HDAC3-204ENST00000469207 CYP4F3Q08477 520 aa12.74□□□□□ -0.37
HDAC3-204ENST00000469207 MSANTD2Q6P1R3 559 aa12.74□□□□□ -0.37
HDAC3-204ENST00000469207 GATAD2AQ86YP4 633 aa12.74□□□□□ -0.37
HDAC3-204ENST00000469207 ARHGEF19Q8IW93 802 aa12.74□□□□□ -0.37
HDAC3-204ENST00000469207 MFN1Q8IWA4 741 aa12.74□□□□□ -0.37
HDAC3-204ENST00000469207 SCUBE3Q8IX30 993 aa12.74□□□□□ -0.37
HDAC3-204ENST00000469207 FMR1NBQ8N0W7 255 aaPredicted RBP12.74□□□□□ -0.37
HDAC3-204ENST00000469207 LMO3Q8TAP4 145 aa12.74□□□□□ -0.37
HDAC3-204ENST00000469207 GANCQ8TET4 914 aa12.74□□□□□ -0.37
HDAC3-204ENST00000469207 CRELD1Q96HD1 420 aa12.74□□□□□ -0.37
HDAC3-204ENST00000469207 MRGPRX3Q96LB0 322 aa12.74□□□□□ -0.37
HDAC3-204ENST00000469207 SLC6A18Q96N87 628 aa12.74□□□□□ -0.37
HDAC3-204ENST00000469207 TSG101Q99816 390 aa12.74□□□□□ -0.37
HDAC3-204ENST00000469207 NUCKS1Q9H1E3 243 aaKnown RBP12.74□□□□□ -0.37
HDAC3-204ENST00000469207 NEUROG2Q9H2A3 272 aa12.74□□□□□ -0.37
HDAC3-204ENST00000469207 FBXL12Q9NXK8 326 aa12.74□□□□□ -0.37
HDAC3-204ENST00000469207 ARMCX3Q9UH62 379 aaPredicted RBP12.74□□□□□ -0.37
HDAC3-204ENST00000469207 SUN2Q9UH99 717 aa12.74□□□□□ -0.37
HDAC3-204ENST00000469207 SLCO3A1Q9UIG8 710 aa12.74□□□□□ -0.37
HDAC3-204ENST00000469207 PCDHGB2Q9Y5G2 931 aa12.74□□□□□ -0.37
HDAC3-204ENST00000469207 A0A1W2PP55 124 aa12.73□□□□□ -0.37
HDAC3-204ENST00000469207 MID1O15344 667 aa12.73□□□□□ -0.37
HDAC3-204ENST00000469207 SLC16A3O15427 465 aaKnown RBP12.73□□□□□ -0.37
HDAC3-204ENST00000469207 LATS1O95835 1130 aa12.73□□□□□ -0.37
HDAC3-204ENST00000469207 C7P10643 843 aa12.73□□□□□ -0.37
HDAC3-204ENST00000469207 CSKP41240 450 aa12.73□□□□□ -0.37
HDAC3-204ENST00000469207 CTSKP43235 329 aa12.73□□□□□ -0.37
HDAC3-204ENST00000469207 SLC11A2P49281 568 aa12.73□□□□□ -0.37
HDAC3-204ENST00000469207 GALCP54803 685 aa12.73□□□□□ -0.37
HDAC3-204ENST00000469207 YWHAEP62258 255 aaKnown RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms