RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 SPTBN4Q9H254 2564 aa15.03■□□□□ -0
COL27A1-203ENST00000468565 A0A1W2PQJ5 194 aa15.02■□□□□ -0
COL27A1-203ENST00000468565 NDUFA10O95299 355 aa15.02■□□□□ -0
COL27A1-203ENST00000468565 GLI1P08151 1106 aa15.02■□□□□ -0
COL27A1-203ENST00000468565 PNMA6AP0CW24 399 aaPredicted RBP15.02■□□□□ -0
COL27A1-203ENST00000468565 SNX16P57768 344 aa15.02■□□□□ -0
COL27A1-203ENST00000468565 YWHAZP63104 245 aaKnown RBP15.02■□□□□ -0
COL27A1-203ENST00000468565 ZBED6P86452 979 aa15.02■□□□□ -0
COL27A1-203ENST00000468565 ZNF569Q5MCW4 686 aa15.02■□□□□ -0
COL27A1-203ENST00000468565 PASD1Q8IV76 773 aa15.02■□□□□ -0
COL27A1-203ENST00000468565 LRRN4CLQ8ND94 238 aa15.02■□□□□ -0
COL27A1-203ENST00000468565 PIWIL1Q96J94 861 aaKnown RBP15.02■□□□□ -0
COL27A1-203ENST00000468565 FCRL2Q96LA5 508 aaPredicted RBP15.02■□□□□ -0
COL27A1-203ENST00000468565 STK33Q9BYT3 514 aa15.02■□□□□ -0
COL27A1-203ENST00000468565 CEP83Q9Y592 693 aa15.02■□□□□ -0
COL27A1-203ENST00000468565 TNRC6BQ9UPQ9 1833 aaKnown RBP15.02□□□□□ -0.01
COL27A1-203ENST00000468565 CAPN9O14815 690 aa15.02□□□□□ -0.01
COL27A1-203ENST00000468565 IRAK2O43187 625 aa15.02□□□□□ -0.01
COL27A1-203ENST00000468565 HOXB2P14652 356 aa15.02□□□□□ -0.01
COL27A1-203ENST00000468565 TGM1P22735 817 aa15.02□□□□□ -0.01
COL27A1-203ENST00000468565 SLC11A2P49281 568 aa15.02□□□□□ -0.01
COL27A1-203ENST00000468565 E2F5Q15329 346 aa15.02□□□□□ -0.01
COL27A1-203ENST00000468565 USP39Q53GS9 565 aaKnown RBP15.02□□□□□ -0.01
COL27A1-203ENST00000468565 SDE2Q6IQ49 451 aa15.02□□□□□ -0.01
COL27A1-203ENST00000468565 FBXO38Q6PIJ6 1188 aa15.02□□□□□ -0.01
COL27A1-203ENST00000468565 ANKS1BQ7Z6G8 1248 aa15.02□□□□□ -0.01
COL27A1-203ENST00000468565 KBTBD6Q86V97 674 aa15.02□□□□□ -0.01
COL27A1-203ENST00000468565 C1orf131Q8NDD1 294 aaKnown RBP15.02□□□□□ -0.01
COL27A1-203ENST00000468565 OLIG1Q8TAK6 271 aa15.02□□□□□ -0.01
COL27A1-203ENST00000468565 SLC39A13Q96H72 371 aa15.02□□□□□ -0.01
COL27A1-203ENST00000468565 GABRG3Q99928 467 aa15.02□□□□□ -0.01
COL27A1-203ENST00000468565 TTYH3Q9C0H2 523 aa15.02□□□□□ -0.01
COL27A1-203ENST00000468565 GANQ9H2C0 597 aa15.02□□□□□ -0.01
COL27A1-203ENST00000468565 ARGLU1Q9NWB6 273 aaPredicted RBP15.02□□□□□ -0.01
COL27A1-203ENST00000468565 TJP2Q9UDY2 1190 aa15.02□□□□□ -0.01
COL27A1-203ENST00000468565 CTAGE9A4FU28 777 aa15.01□□□□□ -0.01
COL27A1-203ENST00000468565 F8VZ95 297 aa15.01□□□□□ -0.01
COL27A1-203ENST00000468565 NPC1O15118 1278 aa15.01□□□□□ -0.01
COL27A1-203ENST00000468565 ACSL4O60488 711 aa15.01□□□□□ -0.01
COL27A1-203ENST00000468565 EPN2O95208 641 aa15.01□□□□□ -0.01
COL27A1-203ENST00000468565 IGLV3-25P01717 112 aa15.01□□□□□ -0.01
COL27A1-203ENST00000468565 CYP11B1P15538 503 aa15.01□□□□□ -0.01
COL27A1-203ENST00000468565 HOXD9P28356 352 aaPredicted RBP15.01□□□□□ -0.01
COL27A1-203ENST00000468565 CDH5P33151 784 aaPredicted RBP15.01□□□□□ -0.01
COL27A1-203ENST00000468565 CYLC1P35663 651 aaPredicted RBP15.01□□□□□ -0.01
COL27A1-203ENST00000468565 KRT83P78385 493 aa15.01□□□□□ -0.01
COL27A1-203ENST00000468565 EIF4HQ15056 248 aaKnown RBP15.01□□□□□ -0.01
COL27A1-203ENST00000468565 GEN1Q17RS7 908 aa15.01□□□□□ -0.01
COL27A1-203ENST00000468565 PLK5Q496M5 336 aa15.01□□□□□ -0.01
COL27A1-203ENST00000468565 EFHC1Q5JVL4 640 aa15.01□□□□□ -0.01
COL27A1-203ENST00000468565 MPP7Q5T2T1 576 aa15.01□□□□□ -0.01
COL27A1-203ENST00000468565 SYPL2Q5VXT5 272 aa15.01□□□□□ -0.01
COL27A1-203ENST00000468565 RNF43Q68DV7 783 aa15.01□□□□□ -0.01
COL27A1-203ENST00000468565 TAC4Q86UU9 113 aa15.01□□□□□ -0.01
COL27A1-203ENST00000468565 CHPFQ8IZ52 775 aa15.01□□□□□ -0.01
COL27A1-203ENST00000468565 IPO4Q8TEX9 1081 aaKnown RBP15.01□□□□□ -0.01
COL27A1-203ENST00000468565 UCMAQ8WVF2 138 aa15.01□□□□□ -0.01
COL27A1-203ENST00000468565 TMA16Q96EY4 203 aaKnown RBP15.01□□□□□ -0.01
COL27A1-203ENST00000468565 CHP1Q99653 195 aa15.01□□□□□ -0.01
COL27A1-203ENST00000468565 DDX50Q9BQ39 737 aaKnown RBP15.01□□□□□ -0.01
COL27A1-203ENST00000468565 TPSD1Q9BZJ3 242 aa15.01□□□□□ -0.01
COL27A1-203ENST00000468565 OGFRQ9NZT2 677 aa15.01□□□□□ -0.01
COL27A1-203ENST00000468565 CLEC4EQ9ULY5 219 aa15.01□□□□□ -0.01
COL27A1-203ENST00000468565 MUC22E2RYF6 1773 aaPredicted RBP15.01□□□□□ -0.01
COL27A1-203ENST00000468565 TCRBV21S2A2A0A5A6 115 aa15□□□□□ -0.01
COL27A1-203ENST00000468565 HSF2BPO75031 334 aa15□□□□□ -0.01
COL27A1-203ENST00000468565 IPO7O95373 1038 aaKnown RBP15□□□□□ -0.01
COL27A1-203ENST00000468565 H2AFXP16104 143 aaPredicted RBP15□□□□□ -0.01
COL27A1-203ENST00000468565 FAM133BQ5BKY9 247 aaKnown RBP15□□□□□ -0.01
COL27A1-203ENST00000468565 ZDHHC17Q8IUH5 632 aa15□□□□□ -0.01
COL27A1-203ENST00000468565 SLC2A13Q96QE2 648 aa15□□□□□ -0.01
COL27A1-203ENST00000468565 ACOX2Q99424 681 aa15□□□□□ -0.01
COL27A1-203ENST00000468565 PARD6AQ9NPB6 346 aa15□□□□□ -0.01
COL27A1-203ENST00000468565 CEP250Q9BV73 2442 aa15□□□□□ -0.01
COL27A1-203ENST00000468565 A0A1W2PQF6 199 aa15□□□□□ -0.01
COL27A1-203ENST00000468565 TSPAN3O60637 253 aa15□□□□□ -0.01
COL27A1-203ENST00000468565 RHOBTB1O94844 696 aa15□□□□□ -0.01
COL27A1-203ENST00000468565 TRUB2O95900 331 aaKnown RBP15□□□□□ -0.01
COL27A1-203ENST00000468565 SLC6A4P31645 630 aa15□□□□□ -0.01
COL27A1-203ENST00000468565 ARHGAP25P42331 645 aa15□□□□□ -0.01
COL27A1-203ENST00000468565 CDK17Q00537 523 aa15□□□□□ -0.01
COL27A1-203ENST00000468565 EIF4EBP2Q13542 120 aaPredicted RBP15□□□□□ -0.01
COL27A1-203ENST00000468565 PTPN20Q4JDL3 420 aa15□□□□□ -0.01
COL27A1-203ENST00000468565 PIK3R6Q5UE93 754 aa15□□□□□ -0.01
COL27A1-203ENST00000468565 NADSYN1Q6IA69 706 aa15□□□□□ -0.01
COL27A1-203ENST00000468565 OLFML1Q6UWY5 402 aa15□□□□□ -0.01
COL27A1-203ENST00000468565 CCDC170Q8IYT3 715 aa15□□□□□ -0.01
COL27A1-203ENST00000468565 ZNF557Q8N988 423 aaPredicted RBP15□□□□□ -0.01
COL27A1-203ENST00000468565 TMEM35BQ8NCS4 154 aa15□□□□□ -0.01
COL27A1-203ENST00000468565 ADAM32Q8TC27 787 aa15□□□□□ -0.01
COL27A1-203ENST00000468565 DDX1Q92499 740 aaKnown RBP15□□□□□ -0.01
COL27A1-203ENST00000468565 DUSP15Q9H1R2 295 aaPredicted RBP15□□□□□ -0.01
COL27A1-203ENST00000468565 HAUS4Q9H6D7 363 aa15□□□□□ -0.01
COL27A1-203ENST00000468565 CD248Q9HCU0 757 aa15□□□□□ -0.01
COL27A1-203ENST00000468565 BCCIPQ9P287 314 aaKnown RBP eCLIP15□□□□□ -0.01
COL27A1-203ENST00000468565 THAP10Q9P2Z0 257 aaPredicted RBP15□□□□□ -0.01
COL27A1-203ENST00000468565 USP18Q9UMW8 372 aa15□□□□□ -0.01
COL27A1-203ENST00000468565 PCDHGA5Q9Y5G8 931 aa15□□□□□ -0.01
COL27A1-203ENST00000468565 DMXL1Q9Y485 3027 aa14.99□□□□□ -0.01
COL27A1-203ENST00000468565 TIMM44O43615 452 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms