RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 KIAA0355O15063 1070 aa4.35□□□□□ -1.71
TMEM39A-204ENST00000468545 EPHB6O15197 1021 aa4.35□□□□□ -1.71
TMEM39A-204ENST00000468545 P4HA2O15460 535 aa4.35□□□□□ -1.71
TMEM39A-204ENST00000468545 XPOTO43592 962 aaKnown RBP4.35□□□□□ -1.71
TMEM39A-204ENST00000468545 DNAJC6O75061 913 aa4.35□□□□□ -1.71
TMEM39A-204ENST00000468545 OFD1O75665 1012 aa4.35□□□□□ -1.71
TMEM39A-204ENST00000468545 PARNO95453 639 aaKnown RBP4.35□□□□□ -1.71
TMEM39A-204ENST00000468545 VNN1O95497 513 aa4.35□□□□□ -1.71
TMEM39A-204ENST00000468545 FGBP02675 491 aa4.35□□□□□ -1.71
TMEM39A-204ENST00000468545 CXCL10P02778 98 aa4.35□□□□□ -1.71
TMEM39A-204ENST00000468545 THP07101 528 aa4.35□□□□□ -1.71
TMEM39A-204ENST00000468545 PNMA6AP0CW24 399 aaPredicted RBP4.35□□□□□ -1.71
TMEM39A-204ENST00000468545 SKILP12757 684 aa4.35□□□□□ -1.71
TMEM39A-204ENST00000468545 KRT5P13647 590 aa4.35□□□□□ -1.71
TMEM39A-204ENST00000468545 ATF2P15336 505 aa4.35□□□□□ -1.71
TMEM39A-204ENST00000468545 FAHP16930 419 aa4.35□□□□□ -1.71
TMEM39A-204ENST00000468545 RFC2P35250 354 aa4.35□□□□□ -1.71
TMEM39A-204ENST00000468545 KRT9P35527 623 aa4.35□□□□□ -1.71
TMEM39A-204ENST00000468545 PBX1P40424 430 aa4.35□□□□□ -1.71
TMEM39A-204ENST00000468545 STAT5AP42229 794 aa4.35□□□□□ -1.71
TMEM39A-204ENST00000468545 RAB27AP51159 221 aa4.35□□□□□ -1.71
TMEM39A-204ENST00000468545 AP3M2P53677 418 aa4.35□□□□□ -1.71
TMEM39A-204ENST00000468545 FAM189BP81408 668 aa4.35□□□□□ -1.71
TMEM39A-204ENST00000468545 RBP5P82980 135 aa4.35□□□□□ -1.71
TMEM39A-204ENST00000468545 IRF9Q00978 393 aa4.35□□□□□ -1.71
TMEM39A-204ENST00000468545 RNASELQ05823 741 aaKnown RBP4.35□□□□□ -1.71
TMEM39A-204ENST00000468545 ZNF124Q15973 351 aa4.35□□□□□ -1.71
TMEM39A-204ENST00000468545 SEPT7Q16181 437 aaKnown RBP4.35□□□□□ -1.71
TMEM39A-204ENST00000468545 CR1LQ2VPA4 569 aa4.35□□□□□ -1.71
TMEM39A-204ENST00000468545 EPC2Q52LR7 807 aa4.35□□□□□ -1.71
TMEM39A-204ENST00000468545 KLHDC7AQ5VTJ3 777 aa4.35□□□□□ -1.71
TMEM39A-204ENST00000468545 BTBD8Q5XKL5 378 aa4.35□□□□□ -1.71
TMEM39A-204ENST00000468545 FSTL4Q6MZW2 842 aa4.35□□□□□ -1.71
TMEM39A-204ENST00000468545 MFSD5Q6N075 450 aa4.35□□□□□ -1.71
TMEM39A-204ENST00000468545 CNKSR3Q6P9H4 555 aa4.35□□□□□ -1.71
TMEM39A-204ENST00000468545 TEPPQ6URK8 271 aa4.35□□□□□ -1.71
TMEM39A-204ENST00000468545 GLB1LQ6UWU2 654 aa4.35□□□□□ -1.71
TMEM39A-204ENST00000468545 ALKAL1Q6UXT8 129 aa4.35□□□□□ -1.71
TMEM39A-204ENST00000468545 SCARA5Q6ZMJ2 495 aa4.35□□□□□ -1.71
TMEM39A-204ENST00000468545 ZNF365Q70YC5 407 aa4.35□□□□□ -1.71
TMEM39A-204ENST00000468545 ARHGEF19Q8IW93 802 aa4.35□□□□□ -1.71
TMEM39A-204ENST00000468545 FBXL13Q8NEE6 735 aa4.35□□□□□ -1.71
TMEM39A-204ENST00000468545 ZNF397Q8NF99 534 aaPredicted RBP4.35□□□□□ -1.71
TMEM39A-204ENST00000468545 OR2W6PQ8NHA6 318 aa4.35□□□□□ -1.71
TMEM39A-204ENST00000468545 URGCPQ8TCY9 931 aa4.35□□□□□ -1.71
TMEM39A-204ENST00000468545 TMEM174Q8WUU8 243 aa4.35□□□□□ -1.71
TMEM39A-204ENST00000468545 APBB2Q92870 758 aa4.35□□□□□ -1.71
TMEM39A-204ENST00000468545 KAT5Q92993 513 aa4.35□□□□□ -1.71
TMEM39A-204ENST00000468545 TRIM44Q96DX7 344 aaPredicted RBP4.35□□□□□ -1.71
TMEM39A-204ENST00000468545 HPDLQ96IR7 371 aa4.35□□□□□ -1.71
TMEM39A-204ENST00000468545 NT5C1BQ96P26 610 aa4.35□□□□□ -1.71
TMEM39A-204ENST00000468545 SPAG5Q96R06 1193 aa4.35□□□□□ -1.71
TMEM39A-204ENST00000468545 ERGIC2Q96RQ1 377 aa4.35□□□□□ -1.71
TMEM39A-204ENST00000468545 PPP1R9BQ96SB3 815 aa4.35□□□□□ -1.71
TMEM39A-204ENST00000468545 MMS19Q96T76 1030 aa4.35□□□□□ -1.71
TMEM39A-204ENST00000468545 LBHD1Q9BQE6 289 aaPredicted RBP4.35□□□□□ -1.71
TMEM39A-204ENST00000468545 IMPG2Q9BZV3 1241 aa4.35□□□□□ -1.71
TMEM39A-204ENST00000468545 PLEKHA5Q9HAU0 1116 aa4.35□□□□□ -1.71
TMEM39A-204ENST00000468545 CD320Q9NPF0 282 aa4.35□□□□□ -1.71
TMEM39A-204ENST00000468545 UBN1Q9NPG3 1134 aa4.35□□□□□ -1.71
TMEM39A-204ENST00000468545 C1orf112Q9NSG2 853 aa4.35□□□□□ -1.71
TMEM39A-204ENST00000468545 RIC8BQ9NVN3 520 aa4.35□□□□□ -1.71
TMEM39A-204ENST00000468545 CACNG4Q9UBN1 327 aa4.35□□□□□ -1.71
TMEM39A-204ENST00000468545 TUBGCP4Q9UGJ1 667 aa4.35□□□□□ -1.71
TMEM39A-204ENST00000468545 PUF60Q9UHX1 559 aaKnown RBP4.35□□□□□ -1.71
TMEM39A-204ENST00000468545 UBQLN1Q9UMX0 589 aaKnown RBP4.35□□□□□ -1.71
TMEM39A-204ENST00000468545 SIK3Q9Y2K2 1263 aa4.35□□□□□ -1.71
TMEM39A-204ENST00000468545 ZKSCAN5Q9Y2L8 839 aa4.35□□□□□ -1.71
TMEM39A-204ENST00000468545 GIT1Q9Y2X7 761 aa4.35□□□□□ -1.71
TMEM39A-204ENST00000468545 LUC7L2Q9Y383 392 aaKnown RBP4.35□□□□□ -1.71
TMEM39A-204ENST00000468545 B3GALT1Q9Y5Z6 326 aa4.35□□□□□ -1.71
TMEM39A-204ENST00000468545 IRAK3Q9Y616 596 aa4.35□□□□□ -1.71
TMEM39A-204ENST00000468545 PCNTO95613 3336 aa4.34□□□□□ -1.71
TMEM39A-204ENST00000468545 ABHD14A-ACY1A0A1B0GW23 586 aa4.34□□□□□ -1.71
TMEM39A-204ENST00000468545 LRRC53A6NM62 1247 aa4.34□□□□□ -1.71
TMEM39A-204ENST00000468545 FAM90A27PA6NNH2 459 aa4.34□□□□□ -1.71
TMEM39A-204ENST00000468545 ZNF891A8MT65 544 aaPredicted RBP4.34□□□□□ -1.71
TMEM39A-204ENST00000468545 NT5C1B-RDH14C9J2C7 533 aa4.34□□□□□ -1.71
TMEM39A-204ENST00000468545 ACOT7O00154 380 aa4.34□□□□□ -1.71
TMEM39A-204ENST00000468545 FOXN3O00409 490 aaPredicted RBP4.34□□□□□ -1.71
TMEM39A-204ENST00000468545 SCDO00767 359 aa4.34□□□□□ -1.71
TMEM39A-204ENST00000468545 PTGESO14684 152 aa4.34□□□□□ -1.71
TMEM39A-204ENST00000468545 PPEF2O14830 753 aa4.34□□□□□ -1.71
TMEM39A-204ENST00000468545 ZNF623O75123 536 aa4.34□□□□□ -1.71
TMEM39A-204ENST00000468545 TADA2AO75478 443 aa4.34□□□□□ -1.71
TMEM39A-204ENST00000468545 GFPT2O94808 682 aa4.34□□□□□ -1.71
TMEM39A-204ENST00000468545 NOL4O94818 638 aa4.34□□□□□ -1.71
TMEM39A-204ENST00000468545 DDHD2O94830 711 aa4.34□□□□□ -1.71
TMEM39A-204ENST00000468545 CALCAP01258 141 aa4.34□□□□□ -1.71
TMEM39A-204ENST00000468545 LRG1P02750 347 aa4.34□□□□□ -1.71
TMEM39A-204ENST00000468545 AMHP03971 560 aa4.34□□□□□ -1.71
TMEM39A-204ENST00000468545 KRT1P04264 644 aa4.34□□□□□ -1.71
TMEM39A-204ENST00000468545 GYPCP04921 128 aa4.34□□□□□ -1.71
TMEM39A-204ENST00000468545 WEE2P0C1S8 567 aa4.34□□□□□ -1.71
TMEM39A-204ENST00000468545 UCHL3P15374 230 aa4.34□□□□□ -1.71
TMEM39A-204ENST00000468545 KCNE1P15382 129 aa4.34□□□□□ -1.71
TMEM39A-204ENST00000468545 ATF7P17544 494 aaPredicted RBP4.34□□□□□ -1.71
TMEM39A-204ENST00000468545 CD58P19256 250 aa4.34□□□□□ -1.71
TMEM39A-204ENST00000468545 STAT1P42224 750 aa4.34□□□□□ -1.71
TMEM39A-204ENST00000468545 RAP1GAPP47736 663 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms