RNA–Protein interactions for RNA: ENST00000468117.1

TMEM53-207, Transcript of transmembrane protein 53, humanhuman

TSL 3

Gene TMEM53, Length 2,017 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-207ENST00000468117 ARTNQ5T4W7 220 aa21.22■□□□□ 0.99
TMEM53-207ENST00000468117 SNX30Q5VWJ9 437 aa21.22■□□□□ 0.99
TMEM53-207ENST00000468117 TFB1MQ8WVM0 346 aaKnown RBP21.22■□□□□ 0.99
TMEM53-207ENST00000468117 RTP4Q96DX8 246 aa21.22■□□□□ 0.99
TMEM53-207ENST00000468117 TRMT2BQ96GJ1 504 aaKnown RBP21.22■□□□□ 0.99
TMEM53-207ENST00000468117 DNAJC17Q9NVM6 304 aaKnown RBP21.22■□□□□ 0.99
TMEM53-207ENST00000468117 TRPM5Q9NZQ8 1165 aa21.22■□□□□ 0.99
TMEM53-207ENST00000468117 DOCK6Q96HP0 2047 aa21.21■□□□□ 0.99
TMEM53-207ENST00000468117 HIDE1A8MVS5 230 aa21.21■□□□□ 0.99
TMEM53-207ENST00000468117 ATP5C1P36542 298 aaKnown RBP21.21■□□□□ 0.99
TMEM53-207ENST00000468117 MLLT6P55198 1093 aaPredicted RBP21.21■□□□□ 0.99
TMEM53-207ENST00000468117 CFAP58Q5T655 872 aa21.21■□□□□ 0.99
TMEM53-207ENST00000468117 RNASEH2BQ5TBB1 312 aaKnown RBP21.21■□□□□ 0.99
TMEM53-207ENST00000468117 MANEALQ5VSG8 457 aa21.21■□□□□ 0.99
TMEM53-207ENST00000468117 PLPP4Q5VZY2 271 aa21.21■□□□□ 0.99
TMEM53-207ENST00000468117 HEATR6Q6AI08 1181 aaKnown RBP21.21■□□□□ 0.99
TMEM53-207ENST00000468117 FAM109BQ6ICB4 259 aaPredicted RBP21.21■□□□□ 0.99
TMEM53-207ENST00000468117 C14orf80Q86SX3 495 aa21.21■□□□□ 0.99
TMEM53-207ENST00000468117 POF1BQ8WVV4 589 aa21.21■□□□□ 0.99
TMEM53-207ENST00000468117 PSMG2Q969U7 264 aa21.21■□□□□ 0.99
TMEM53-207ENST00000468117 KLHL5Q96PQ7 755 aa21.21■□□□□ 0.99
TMEM53-207ENST00000468117 NACA2Q9H009 215 aa21.21■□□□□ 0.99
TMEM53-207ENST00000468117 ACBD3Q9H3P7 528 aa21.21■□□□□ 0.99
TMEM53-207ENST00000468117 PRDM12Q9H4Q4 367 aa21.21■□□□□ 0.99
TMEM53-207ENST00000468117 TMEM51Q9NW97 253 aa21.21■□□□□ 0.99
TMEM53-207ENST00000468117 MAFFQ9ULX9 164 aa21.21■□□□□ 0.99
TMEM53-207ENST00000468117 IGLV3-27P01718 113 aa21.21■□□□□ 0.99
TMEM53-207ENST00000468117 ADH1AP07327 375 aa21.21■□□□□ 0.99
TMEM53-207ENST00000468117 VAV1P15498 845 aa21.21■□□□□ 0.99
TMEM53-207ENST00000468117 ACTN2P35609 894 aa21.21■□□□□ 0.99
TMEM53-207ENST00000468117 PDK1Q15118 436 aa21.21■□□□□ 0.99
TMEM53-207ENST00000468117 HECTD3Q5T447 861 aa21.21■□□□□ 0.99
TMEM53-207ENST00000468117 IQCKQ8N0W5 287 aa21.21■□□□□ 0.99
TMEM53-207ENST00000468117 CCNYQ8ND76 341 aa21.21■□□□□ 0.99
TMEM53-207ENST00000468117 SPPL3Q8TCT6 385 aa21.21■□□□□ 0.99
TMEM53-207ENST00000468117 ZIM3Q96PE6 472 aa21.21■□□□□ 0.99
TMEM53-207ENST00000468117 CDK5RAP1Q96SZ6 601 aaKnown RBP21.21■□□□□ 0.99
TMEM53-207ENST00000468117 DNMT3LQ9UJW3 386 aa21.21■□□□□ 0.99
TMEM53-207ENST00000468117 LZTS1Q9Y250 596 aa21.21■□□□□ 0.99
TMEM53-207ENST00000468117 DENND4CQ5VZ89 1909 aa21.21■□□□□ 0.99
TMEM53-207ENST00000468117 HACD1B0YJ81 288 aa21.2■□□□□ 0.98
TMEM53-207ENST00000468117 E9PAM4 449 aa21.2■□□□□ 0.98
TMEM53-207ENST00000468117 AGPSO00116 658 aa21.2■□□□□ 0.98
TMEM53-207ENST00000468117 PMS2P54278 862 aa21.2■□□□□ 0.98
TMEM53-207ENST00000468117 AP1B1Q10567 949 aa21.2■□□□□ 0.98
TMEM53-207ENST00000468117 MS4A13Q5J8X5 152 aa21.2■□□□□ 0.98
TMEM53-207ENST00000468117 LILRA6Q6PI73 481 aa21.2■□□□□ 0.98
TMEM53-207ENST00000468117 PDZD4Q76G19 769 aaPredicted RBP21.2■□□□□ 0.98
TMEM53-207ENST00000468117 ZNF276Q8N554 614 aa21.2■□□□□ 0.98
TMEM53-207ENST00000468117 CCDC110Q8TBZ0 833 aa21.2■□□□□ 0.98
TMEM53-207ENST00000468117 HTR3CQ8WXA8 447 aa21.2■□□□□ 0.98
TMEM53-207ENST00000468117 CPT1BQ92523 772 aa21.2■□□□□ 0.98
TMEM53-207ENST00000468117 TBC1D31Q96DN5 1066 aa21.2■□□□□ 0.98
TMEM53-207ENST00000468117 BTN2A3PQ96KV6 586 aa21.2■□□□□ 0.98
TMEM53-207ENST00000468117 C1orf74Q96LT6 269 aa21.2■□□□□ 0.98
TMEM53-207ENST00000468117 VANGL2Q9ULK5 521 aa21.2■□□□□ 0.98
TMEM53-207ENST00000468117 FARP1Q9Y4F1 1045 aaPredicted RBP21.2■□□□□ 0.98
TMEM53-207ENST00000468117 IRAK3Q9Y616 596 aa21.2■□□□□ 0.98
TMEM53-207ENST00000468117 TRANK1O15050 2925 aa21.2■□□□□ 0.98
TMEM53-207ENST00000468117 COCHO43405 550 aa21.19■□□□□ 0.98
TMEM53-207ENST00000468117 HOXC13P31276 330 aa21.19■□□□□ 0.98
TMEM53-207ENST00000468117 TUBP50607 506 aa21.19■□□□□ 0.98
TMEM53-207ENST00000468117 KCNQ1P51787 676 aa21.19■□□□□ 0.98
TMEM53-207ENST00000468117 BASP1P80723 227 aaKnown RBP21.19■□□□□ 0.98
TMEM53-207ENST00000468117 MORF4L2Q15014 288 aa21.19■□□□□ 0.98
TMEM53-207ENST00000468117 ALS2CLQ60I27 953 aa21.19■□□□□ 0.98
TMEM53-207ENST00000468117 TADA2BQ86TJ2 420 aa21.19■□□□□ 0.98
TMEM53-207ENST00000468117 ATP6V0D2Q8N8Y2 350 aa21.19■□□□□ 0.98
TMEM53-207ENST00000468117 SEMA4AQ9H3S1 761 aa21.19■□□□□ 0.98
TMEM53-207ENST00000468117 TLR9Q9NR96 1032 aa21.19■□□□□ 0.98
TMEM53-207ENST00000468117 OGFRQ9NZT2 677 aa21.19■□□□□ 0.98
TMEM53-207ENST00000468117 SLC12A6Q9UHW9 1150 aa21.19■□□□□ 0.98
TMEM53-207ENST00000468117 C2orf71A6NGG8 1288 aa21.19■□□□□ 0.98
TMEM53-207ENST00000468117 PPP1R12AO14974 1030 aaPredicted RBP21.19■□□□□ 0.98
TMEM53-207ENST00000468117 SERPINB6P35237 376 aa21.19■□□□□ 0.98
TMEM53-207ENST00000468117 RING1Q06587 406 aa21.19■□□□□ 0.98
TMEM53-207ENST00000468117 SLMAPQ14BN4 828 aa21.19■□□□□ 0.98
TMEM53-207ENST00000468117 PRKD1Q15139 912 aaPredicted RBP21.19■□□□□ 0.98
TMEM53-207ENST00000468117 ANKRD22Q5VYY1 191 aa21.19■□□□□ 0.98
TMEM53-207ENST00000468117 PCGF5Q86SE9 256 aa21.19■□□□□ 0.98
TMEM53-207ENST00000468117 TMEM150AQ86TG1 271 aa21.19■□□□□ 0.98
TMEM53-207ENST00000468117 MRPL43Q8N983 215 aaKnown RBP21.19■□□□□ 0.98
TMEM53-207ENST00000468117 PRCCQ92733 491 aaPredicted RBP21.19■□□□□ 0.98
TMEM53-207ENST00000468117 CELF6Q96J87 481 aaKnown RBP21.19■□□□□ 0.98
TMEM53-207ENST00000468117 EMILIN2Q9BXX0 1053 aa21.19■□□□□ 0.98
TMEM53-207ENST00000468117 ZNF334Q9HCZ1 680 aaPredicted RBP21.19■□□□□ 0.98
TMEM53-207ENST00000468117 MPP6Q9NZW5 540 aa21.19■□□□□ 0.98
TMEM53-207ENST00000468117 PAK5Q9P286 719 aa21.19■□□□□ 0.98
TMEM53-207ENST00000468117 PLAAQ9Y263 795 aa21.19■□□□□ 0.98
TMEM53-207ENST00000468117 RWDD3Q9Y3V2 267 aa21.19■□□□□ 0.98
TMEM53-207ENST00000468117 C2orf78A6NCI8 922 aa21.18■□□□□ 0.98
TMEM53-207ENST00000468117 HTR7P34969 479 aa21.18■□□□□ 0.98
TMEM53-207ENST00000468117 NRG1Q02297 640 aaPredicted RBP21.18■□□□□ 0.98
TMEM53-207ENST00000468117 AUHQ13825 339 aaKnown RBP21.18■□□□□ 0.98
TMEM53-207ENST00000468117 UBAP2Q5T6F2 1119 aaKnown RBP21.18■□□□□ 0.98
TMEM53-207ENST00000468117 PPIL6Q8IXY8 311 aa21.18■□□□□ 0.98
TMEM53-207ENST00000468117 ZCCHC9Q8N567 271 aaKnown RBP21.18■□□□□ 0.98
TMEM53-207ENST00000468117 P2RY11Q96G91 374 aa21.18■□□□□ 0.98
TMEM53-207ENST00000468117 EPB41L4BQ9H329 900 aa21.18■□□□□ 0.98
TMEM53-207ENST00000468117 CATSPERBQ9H7T0 1116 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms