RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 PCDHGA8Q9Y5G5 932 aa10.71□□□□□ -0.69
HDAC3-203ENST00000467533 UBE4BO95155 1302 aa10.7□□□□□ -0.7
HDAC3-203ENST00000467533 PMS2P1A4D2B8 440 aa10.7□□□□□ -0.7
HDAC3-203ENST00000467533 EFSO43281 561 aa10.7□□□□□ -0.7
HDAC3-203ENST00000467533 BEST1O76090 585 aa10.7□□□□□ -0.7
HDAC3-203ENST00000467533 TNFSF15O95150 251 aa10.7□□□□□ -0.7
HDAC3-203ENST00000467533 FAM163BP0C2L3 166 aa10.7□□□□□ -0.7
HDAC3-203ENST00000467533 HLA-FP30511 346 aa10.7□□□□□ -0.7
HDAC3-203ENST00000467533 UBA7P41226 1012 aa10.7□□□□□ -0.7
HDAC3-203ENST00000467533 PPP2CBP62714 309 aa10.7□□□□□ -0.7
HDAC3-203ENST00000467533 PPP2CAP67775 309 aa10.7□□□□□ -0.7
HDAC3-203ENST00000467533 COG7P83436 770 aa10.7□□□□□ -0.7
HDAC3-203ENST00000467533 FOXK1P85037 733 aa10.7□□□□□ -0.7
HDAC3-203ENST00000467533 EHHADHQ08426 723 aa10.7□□□□□ -0.7
HDAC3-203ENST00000467533 CST6Q15828 149 aa10.7□□□□□ -0.7
HDAC3-203ENST00000467533 IGFBP7Q16270 282 aa10.7□□□□□ -0.7
HDAC3-203ENST00000467533 GPRIN1Q7Z2K8 1008 aa10.7□□□□□ -0.7
HDAC3-203ENST00000467533 CLEC14AQ86T13 490 aa10.7□□□□□ -0.7
HDAC3-203ENST00000467533 PTRH1Q86Y79 214 aaKnown RBP10.7□□□□□ -0.7
HDAC3-203ENST00000467533 DENND1CQ8IV53 801 aa10.7□□□□□ -0.7
HDAC3-203ENST00000467533 FUKQ8N0W3 1084 aa10.7□□□□□ -0.7
HDAC3-203ENST00000467533 AHI1Q8N157 1196 aa10.7□□□□□ -0.7
HDAC3-203ENST00000467533 SLC25A45Q8N413 288 aa10.7□□□□□ -0.7
HDAC3-203ENST00000467533 CPXM2Q8N436 756 aa10.7□□□□□ -0.7
HDAC3-203ENST00000467533 FAM184AQ8NB25 1140 aa10.7□□□□□ -0.7
HDAC3-203ENST00000467533 OR14C36Q8NHC7 312 aa10.7□□□□□ -0.7
HDAC3-203ENST00000467533 IFI44Q8TCB0 444 aa10.7□□□□□ -0.7
HDAC3-203ENST00000467533 LARP4BQ92615 738 aaKnown RBP10.7□□□□□ -0.7
HDAC3-203ENST00000467533 PRR11Q96HE9 360 aaPredicted RBP10.7□□□□□ -0.7
HDAC3-203ENST00000467533 TNIP3Q96KP6 325 aa10.7□□□□□ -0.7
HDAC3-203ENST00000467533 APOLD1Q96LR9 279 aa10.7□□□□□ -0.7
HDAC3-203ENST00000467533 SLC25A18Q9H1K4 315 aa10.7□□□□□ -0.7
HDAC3-203ENST00000467533 SMYD3Q9H7B4 428 aa10.7□□□□□ -0.7
HDAC3-203ENST00000467533 ABCB8Q9NUT2 735 aa10.7□□□□□ -0.7
HDAC3-203ENST00000467533 UCKL1Q9NWZ5 548 aa10.7□□□□□ -0.7
HDAC3-203ENST00000467533 GGA2Q9UJY4 613 aa10.7□□□□□ -0.7
HDAC3-203ENST00000467533 FZD4Q9ULV1 537 aa10.7□□□□□ -0.7
HDAC3-203ENST00000467533 TPX2Q9ULW0 747 aaKnown RBP10.7□□□□□ -0.7
HDAC3-203ENST00000467533 ENTPD2Q9Y5L3 495 aa10.7□□□□□ -0.7
HDAC3-203ENST00000467533 RELNP78509 3460 aa10.7□□□□□ -0.7
HDAC3-203ENST00000467533 CREBBPQ92793 2442 aa10.69□□□□□ -0.7
HDAC3-203ENST00000467533 ZNF233A6NK53 670 aa10.69□□□□□ -0.7
HDAC3-203ENST00000467533 SLC26A4O43511 780 aa10.69□□□□□ -0.7
HDAC3-203ENST00000467533 LZTS3O60299 673 aaPredicted RBP10.69□□□□□ -0.7
HDAC3-203ENST00000467533 SIN3BO75182 1162 aa10.69□□□□□ -0.7
HDAC3-203ENST00000467533 CST3P01034 146 aaPredicted RBP10.69□□□□□ -0.7
HDAC3-203ENST00000467533 ATP5BP06576 529 aaKnown RBP10.69□□□□□ -0.7
HDAC3-203ENST00000467533 DLDP09622 509 aaKnown RBP10.69□□□□□ -0.7
HDAC3-203ENST00000467533 THEGLP0DJG4 465 aa10.69□□□□□ -0.7
HDAC3-203ENST00000467533 RALAP11233 206 aa10.69□□□□□ -0.7
HDAC3-203ENST00000467533 PABPC1P11940 636 aaKnown RBP10.69□□□□□ -0.7
HDAC3-203ENST00000467533 DGKAP23743 735 aa10.69□□□□□ -0.7
HDAC3-203ENST00000467533 HOXD9P28356 352 aaPredicted RBP10.69□□□□□ -0.7
HDAC3-203ENST00000467533 PSMD8P48556 350 aa10.69□□□□□ -0.7
HDAC3-203ENST00000467533 ADPRHP54922 357 aa10.69□□□□□ -0.7
HDAC3-203ENST00000467533 PDE4CQ08493 712 aa10.69□□□□□ -0.7
HDAC3-203ENST00000467533 EFEMP1Q12805 493 aa10.69□□□□□ -0.7
HDAC3-203ENST00000467533 SRSF6Q13247 344 aaKnown RBP10.69□□□□□ -0.7
HDAC3-203ENST00000467533 TRPC3Q13507 836 aa10.69□□□□□ -0.7
HDAC3-203ENST00000467533 SKIDA1Q1XH10 827 aa10.69□□□□□ -0.7
HDAC3-203ENST00000467533 MPPE1Q53F39 396 aa10.69□□□□□ -0.7
HDAC3-203ENST00000467533 MBLAC2Q68D91 279 aa10.69□□□□□ -0.7
HDAC3-203ENST00000467533 SCARA5Q6ZMJ2 495 aa10.69□□□□□ -0.7
HDAC3-203ENST00000467533 SND1Q7KZF4 910 aaKnown RBP eCLIP10.69□□□□□ -0.7
HDAC3-203ENST00000467533 CENPQQ7L2Z9 268 aaPredicted RBP10.69□□□□□ -0.7
HDAC3-203ENST00000467533 ACOT1Q86TX2 421 aa10.69□□□□□ -0.7
HDAC3-203ENST00000467533 PRPF39Q86UA1 669 aaKnown RBP10.69□□□□□ -0.7
HDAC3-203ENST00000467533 ADIPOR2Q86V24 386 aa10.69□□□□□ -0.7
HDAC3-203ENST00000467533 IQCHQ86VS3 1027 aa10.69□□□□□ -0.7
HDAC3-203ENST00000467533 MMAAQ8IVH4 418 aaKnown RBP10.69□□□□□ -0.7
HDAC3-203ENST00000467533 SLC2A14Q8TDB8 520 aa10.69□□□□□ -0.7
HDAC3-203ENST00000467533 ARRDC3Q96B67 414 aa10.69□□□□□ -0.7
HDAC3-203ENST00000467533 GRAMD1AQ96CP6 724 aa10.69□□□□□ -0.7
HDAC3-203ENST00000467533 LIN37Q96GY3 246 aaPredicted RBP10.69□□□□□ -0.7
HDAC3-203ENST00000467533 STRA6Q9BX79 667 aa10.69□□□□□ -0.7
HDAC3-203ENST00000467533 CSNK1G1Q9HCP0 422 aa10.69□□□□□ -0.7
HDAC3-203ENST00000467533 TDRD6O60522 2096 aaKnown RBP10.69□□□□□ -0.7
HDAC3-203ENST00000467533 TBC1D3DA0A087WVF3 549 aa10.68□□□□□ -0.7
HDAC3-203ENST00000467533 TBC1D3IA0A087WXS9 549 aa10.68□□□□□ -0.7
HDAC3-203ENST00000467533 TBC1D3EA0A087X179 549 aa10.68□□□□□ -0.7
HDAC3-203ENST00000467533 TBC1D3KA0A087X1G2 549 aa10.68□□□□□ -0.7
HDAC3-203ENST00000467533 TBC1D3FA6NER0 549 aaPredicted RBP10.68□□□□□ -0.7
HDAC3-203ENST00000467533 TBC1D3LB9A6J9 549 aa10.68□□□□□ -0.7
HDAC3-203ENST00000467533 TBC1D3HP0C7X1 549 aa10.68□□□□□ -0.7
HDAC3-203ENST00000467533 FAM200BP0CF97 657 aa10.68□□□□□ -0.7
HDAC3-203ENST00000467533 DLATP10515 647 aaKnown RBP10.68□□□□□ -0.7
HDAC3-203ENST00000467533 TNNI1P19237 187 aa10.68□□□□□ -0.7
HDAC3-203ENST00000467533 POLR2EP19388 210 aaKnown RBP10.68□□□□□ -0.7
HDAC3-203ENST00000467533 TGM2P21980 687 aa10.68□□□□□ -0.7
HDAC3-203ENST00000467533 ADORA2BP29275 332 aa10.68□□□□□ -0.7
HDAC3-203ENST00000467533 MAT2AP31153 395 aaKnown RBP10.68□□□□□ -0.7
HDAC3-203ENST00000467533 SLC8A1P32418 973 aa10.68□□□□□ -0.7
HDAC3-203ENST00000467533 MLLT3P42568 568 aaPredicted RBP10.68□□□□□ -0.7
HDAC3-203ENST00000467533 PSEN1P49768 467 aa10.68□□□□□ -0.7
HDAC3-203ENST00000467533 RIPPLY3P57055 190 aa10.68□□□□□ -0.7
HDAC3-203ENST00000467533 ST8SIA6P61647 398 aa10.68□□□□□ -0.7
HDAC3-203ENST00000467533 OVGP1Q12889 678 aa10.68□□□□□ -0.7
HDAC3-203ENST00000467533 STAT4Q14765 748 aa10.68□□□□□ -0.7
HDAC3-203ENST00000467533 TBR1Q16650 682 aa10.68□□□□□ -0.7
HDAC3-203ENST00000467533 TBC1D3GQ6DHY5 549 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms