RNA–Protein interactions for RNA: ENST00000467435.1

HDLBP-231, Transcript of high density lipoprotein binding protein, human

TSL 2

Gene HDLBP, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-231	ENST00000467435	MARCH2	Q9P0N8	246 aa		12.68	□□□□□ -0.38
HDLBP-231	ENST00000467435	VPS18	Q9P253	973 aa		12.68	□□□□□ -0.38
HDLBP-231	ENST00000467435	XPO7	Q9UIA9	1087 aa	Known RBP	12.68	□□□□□ -0.38
HDLBP-231	ENST00000467435	INSL6	Q9Y581	213 aa		12.68	□□□□□ -0.38
HDLBP-231	ENST00000467435	HS3ST4	Q9Y661	456 aa		12.68	□□□□□ -0.38
HDLBP-231	ENST00000467435	DENND4C	Q5VZ89	1909 aa		12.67	□□□□□ -0.38
HDLBP-231	ENST00000467435	SLC12A8	A0AV02	714 aa		12.67	□□□□□ -0.38
HDLBP-231	ENST00000467435	GOLGA8M	H3BSY2	632 aa		12.67	□□□□□ -0.38
HDLBP-231	ENST00000467435	PRRG1	O14668	218 aa		12.67	□□□□□ -0.38
HDLBP-231	ENST00000467435	CHAD	O15335	359 aa		12.67	□□□□□ -0.38
HDLBP-231	ENST00000467435	FGF10	O15520	208 aa	Predicted RBP	12.67	□□□□□ -0.38
HDLBP-231	ENST00000467435	TLR5	O60602	858 aa		12.67	□□□□□ -0.38
HDLBP-231	ENST00000467435	GCAT	O75600	419 aa		12.67	□□□□□ -0.38
HDLBP-231	ENST00000467435	ZNF189	O75820	626 aa	Predicted RBP	12.67	□□□□□ -0.38
HDLBP-231	ENST00000467435	STK10	O94804	968 aa	Known RBP	12.67	□□□□□ -0.38
HDLBP-231	ENST00000467435	ACSL3	O95573	720 aa		12.67	□□□□□ -0.38
HDLBP-231	ENST00000467435	CSH1	P0DML2	217 aa		12.67	□□□□□ -0.38
HDLBP-231	ENST00000467435	CSH2	P0DML3	217 aa		12.67	□□□□□ -0.38
HDLBP-231	ENST00000467435	SRGAP2B	P0DMP2	458 aa		12.67	□□□□□ -0.38
HDLBP-231	ENST00000467435	CTSA	P10619	480 aa		12.67	□□□□□ -0.38
HDLBP-231	ENST00000467435	ELF1	P32519	619 aa		12.67	□□□□□ -0.38
HDLBP-231	ENST00000467435	ALDH1A3	P47895	512 aa		12.67	□□□□□ -0.38
HDLBP-231	ENST00000467435	EIF3B	P55884	814 aa	Known RBP	12.67	□□□□□ -0.38
HDLBP-231	ENST00000467435	NRG1	Q02297	640 aa	Predicted RBP	12.67	□□□□□ -0.38
HDLBP-231	ENST00000467435	GALNT2	Q10471	571 aa		12.67	□□□□□ -0.38
HDLBP-231	ENST00000467435	PLD1	Q13393	1074 aa		12.67	□□□□□ -0.38
HDLBP-231	ENST00000467435	KCNJ11	Q14654	390 aa		12.67	□□□□□ -0.38
HDLBP-231	ENST00000467435	HIF1A	Q16665	826 aa		12.67	□□□□□ -0.38
HDLBP-231	ENST00000467435	TTMP	Q5BVD1	217 aa		12.67	□□□□□ -0.38
HDLBP-231	ENST00000467435	FAXC	Q5TGI0	409 aa		12.67	□□□□□ -0.38
HDLBP-231	ENST00000467435	RWDD4	Q6NW29	188 aa	Known RBP	12.67	□□□□□ -0.38
HDLBP-231	ENST00000467435	ARHGEF18	Q6ZSZ5	1173 aa		12.67	□□□□□ -0.38
HDLBP-231	ENST00000467435	CENPU	Q71F23	418 aa		12.67	□□□□□ -0.38
HDLBP-231	ENST00000467435	TADA2B	Q86TJ2	420 aa		12.67	□□□□□ -0.38
HDLBP-231	ENST00000467435	MIB1	Q86YT6	1006 aa		12.67	□□□□□ -0.38
HDLBP-231	ENST00000467435	RELL1	Q8IUW5	271 aa		12.67	□□□□□ -0.38
HDLBP-231	ENST00000467435	HERC6	Q8IVU3	1022 aa		12.67	□□□□□ -0.38
HDLBP-231	ENST00000467435	TP53INP2	Q8IXH6	220 aa		12.67	□□□□□ -0.38
HDLBP-231	ENST00000467435	GPR65	Q8IYL9	337 aa		12.67	□□□□□ -0.38
HDLBP-231	ENST00000467435	ATP6V0D2	Q8N8Y2	350 aa		12.67	□□□□□ -0.38
HDLBP-231	ENST00000467435	ZNF512	Q96ME7	567 aa	Predicted RBP	12.67	□□□□□ -0.38
HDLBP-231	ENST00000467435	CDK5RAP1	Q96SZ6	601 aa	Known RBP	12.67	□□□□□ -0.38
HDLBP-231	ENST00000467435	LGMN	Q99538	433 aa		12.67	□□□□□ -0.38
HDLBP-231	ENST00000467435	FERMT1	Q9BQL6	677 aa		12.67	□□□□□ -0.38
HDLBP-231	ENST00000467435	PHACTR1	Q9C0D0	580 aa		12.67	□□□□□ -0.38
HDLBP-231	ENST00000467435	KLC2	Q9H0B6	622 aa		12.67	□□□□□ -0.38
HDLBP-231	ENST00000467435	PRDM12	Q9H4Q4	367 aa		12.67	□□□□□ -0.38
HDLBP-231	ENST00000467435	CATSPERB	Q9H7T0	1116 aa		12.67	□□□□□ -0.38
HDLBP-231	ENST00000467435	CCSER2	Q9H7U1	834 aa		12.67	□□□□□ -0.38
HDLBP-231	ENST00000467435	RAB6B	Q9NRW1	208 aa		12.67	□□□□□ -0.38
HDLBP-231	ENST00000467435	FNIP2	Q9P278	1114 aa		12.67	□□□□□ -0.38
HDLBP-231	ENST00000467435	SSX2IP	Q9Y2D8	614 aa		12.67	□□□□□ -0.38
HDLBP-231	ENST00000467435	INSL5	Q9Y5Q6	135 aa		12.67	□□□□□ -0.38
HDLBP-231	ENST00000467435		A0A0A0MRY4	1105 aa		12.66	□□□□□ -0.38
HDLBP-231	ENST00000467435	TCRBV7S3A2	A0A539	114 aa		12.66	□□□□□ -0.38
HDLBP-231	ENST00000467435	C5orf60	A6NFR6	353 aa		12.66	□□□□□ -0.38
HDLBP-231	ENST00000467435		E9PAM4	449 aa		12.66	□□□□□ -0.38
HDLBP-231	ENST00000467435	RNF103	O00237	685 aa		12.66	□□□□□ -0.38
HDLBP-231	ENST00000467435	NCAM2	O15394	837 aa		12.66	□□□□□ -0.38
HDLBP-231	ENST00000467435	TEX28	O15482	410 aa		12.66	□□□□□ -0.38
HDLBP-231	ENST00000467435	TBX18	O95935	607 aa		12.66	□□□□□ -0.38
HDLBP-231	ENST00000467435	IGLV3-27	P01718	113 aa		12.66	□□□□□ -0.38
HDLBP-231	ENST00000467435	SHBG	P04278	402 aa		12.66	□□□□□ -0.38
HDLBP-231	ENST00000467435	HMBS	P08397	361 aa		12.66	□□□□□ -0.38
HDLBP-231	ENST00000467435	MYZAP	P0CAP1	466 aa		12.66	□□□□□ -0.38
HDLBP-231	ENST00000467435	HMGA1	P17096	107 aa	Known RBP	12.66	□□□□□ -0.38
HDLBP-231	ENST00000467435	SYN1	P17600	705 aa		12.66	□□□□□ -0.38
HDLBP-231	ENST00000467435	MX2	P20592	715 aa		12.66	□□□□□ -0.38
HDLBP-231	ENST00000467435	MAGEA4	P43358	317 aa		12.66	□□□□□ -0.38
HDLBP-231	ENST00000467435	ARL4C	P56559	192 aa		12.66	□□□□□ -0.38
HDLBP-231	ENST00000467435	GAD2	Q05329	585 aa		12.66	□□□□□ -0.38
HDLBP-231	ENST00000467435	PPID	Q08752	370 aa	Known RBP	12.66	□□□□□ -0.38
HDLBP-231	ENST00000467435	TWF1	Q12792	350 aa		12.66	□□□□□ -0.38
HDLBP-231	ENST00000467435	SLC29A2	Q14542	456 aa		12.66	□□□□□ -0.38
HDLBP-231	ENST00000467435	TAF12	Q16514	161 aa		12.66	□□□□□ -0.38
HDLBP-231	ENST00000467435	KRT71	Q3SY84	523 aa		12.66	□□□□□ -0.38
HDLBP-231	ENST00000467435	FAM182A	Q5T1J6	154 aa		12.66	□□□□□ -0.38
HDLBP-231	ENST00000467435	PIK3R6	Q5UE93	754 aa		12.66	□□□□□ -0.38
HDLBP-231	ENST00000467435	PPP1R21	Q6ZMI0	780 aa		12.66	□□□□□ -0.38
HDLBP-231	ENST00000467435	KLHL23	Q8NBE8	558 aa		12.66	□□□□□ -0.38
HDLBP-231	ENST00000467435	CCNY	Q8ND76	341 aa		12.66	□□□□□ -0.38
HDLBP-231	ENST00000467435	UHMK1	Q8TAS1	419 aa	Known RBP	12.66	□□□□□ -0.38
HDLBP-231	ENST00000467435	SP7	Q8TDD2	431 aa	Predicted RBP	12.66	□□□□□ -0.38
HDLBP-231	ENST00000467435	HERVK_113	Q902F9	699 aa		12.66	□□□□□ -0.38
HDLBP-231	ENST00000467435	CLP1	Q92989	425 aa	Known RBP	12.66	□□□□□ -0.38
HDLBP-231	ENST00000467435	ARL8A	Q96BM9	186 aa		12.66	□□□□□ -0.38
HDLBP-231	ENST00000467435	HDAC11	Q96DB2	347 aa		12.66	□□□□□ -0.38
HDLBP-231	ENST00000467435	P2RY11	Q96G91	374 aa		12.66	□□□□□ -0.38
HDLBP-231	ENST00000467435	C9orf72	Q96LT7	481 aa		12.66	□□□□□ -0.38
HDLBP-231	ENST00000467435	SPATA13	Q96N96	652 aa		12.66	□□□□□ -0.38
HDLBP-231	ENST00000467435	RXFP1	Q9HBX9	757 aa		12.66	□□□□□ -0.38
HDLBP-231	ENST00000467435	TMBIM4	Q9HC24	238 aa		12.66	□□□□□ -0.38
HDLBP-231	ENST00000467435	SEPT10	Q9P0V9	454 aa		12.66	□□□□□ -0.38
HDLBP-231	ENST00000467435	MAFF	Q9ULX9	164 aa		12.66	□□□□□ -0.38
HDLBP-231	ENST00000467435	SLC4A7	Q9Y6M7	1214 aa		12.66	□□□□□ -0.38
HDLBP-231	ENST00000467435	HELZ	P42694	1942 aa	Known RBP	12.65	□□□□□ -0.38
HDLBP-231	ENST00000467435	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	12.65	□□□□□ -0.38
HDLBP-231	ENST00000467435	GOLGA6C	A6NDK9	693 aa		12.65	□□□□□ -0.38
HDLBP-231	ENST00000467435	EIF3H	O15372	352 aa	Known RBP eCLIP	12.65	□□□□□ -0.38
HDLBP-231	ENST00000467435	TLL1	O43897	1013 aa		12.65	□□□□□ -0.38

Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms