RNA–Protein interactions for RNA: ENST00000466704.1

CALD1-214, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 903 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-214ENST00000466704 PTK2BQ14289 1009 aa4.5□□□□□ -1.69
CALD1-214ENST00000466704 TRIP6Q15654 476 aaKnown RBP4.5□□□□□ -1.69
CALD1-214ENST00000466704 PFKFB4Q16877 469 aa4.5□□□□□ -1.69
CALD1-214ENST00000466704 ZACNQ401N2 412 aa4.5□□□□□ -1.69
CALD1-214ENST00000466704 C16orf89Q6UX73 402 aa4.5□□□□□ -1.69
CALD1-214ENST00000466704 KYAT3Q6YP21 454 aaKnown RBP4.5□□□□□ -1.69
CALD1-214ENST00000466704 TRABD2AQ86V40 505 aa4.5□□□□□ -1.69
CALD1-214ENST00000466704 ATG16L2Q8NAA4 619 aa4.5□□□□□ -1.69
CALD1-214ENST00000466704 DENND1AQ8TEH3 1009 aa4.5□□□□□ -1.69
CALD1-214ENST00000466704 POF1BQ8WVV4 589 aa4.5□□□□□ -1.69
CALD1-214ENST00000466704 RPL36ALQ969Q0 106 aaKnown RBP4.5□□□□□ -1.69
CALD1-214ENST00000466704 REXO5Q96IC2 774 aaKnown RBP4.5□□□□□ -1.69
CALD1-214ENST00000466704 FCRL5Q96RD9 977 aa4.5□□□□□ -1.69
CALD1-214ENST00000466704 ELOVL1Q9BW60 279 aa4.5□□□□□ -1.69
CALD1-214ENST00000466704 PRDM16Q9HAZ2 1276 aa4.5□□□□□ -1.69
CALD1-214ENST00000466704 TAGLN3Q9UI15 199 aa4.5□□□□□ -1.69
CALD1-214ENST00000466704 NFU1Q9UMS0 254 aa4.5□□□□□ -1.69
CALD1-214ENST00000466704 STRCQ7RTU9 1775 aa4.5□□□□□ -1.69
CALD1-214ENST00000466704 LRRIQ1Q96JM4 1722 aa4.49□□□□□ -1.69
CALD1-214ENST00000466704 POGZQ7Z3K3 1410 aa4.49□□□□□ -1.69
CALD1-214ENST00000466704 KIAA1107Q9UPP5 1409 aa4.49□□□□□ -1.69
CALD1-214ENST00000466704 TRAPPC8Q9Y2L5 1435 aa4.49□□□□□ -1.69
CALD1-214ENST00000466704 GXYLT2A0PJZ3 443 aa4.49□□□□□ -1.69
CALD1-214ENST00000466704 M0QZQ0 153 aa4.49□□□□□ -1.69
CALD1-214ENST00000466704 PRYO14603 147 aa4.49□□□□□ -1.69
CALD1-214ENST00000466704 RRHO14718 337 aa4.49□□□□□ -1.69
CALD1-214ENST00000466704 TP73O15350 636 aa4.49□□□□□ -1.69
CALD1-214ENST00000466704 RPP40O75818 363 aaKnown RBP4.49□□□□□ -1.69
CALD1-214ENST00000466704 PLAUP00749 431 aa4.49□□□□□ -1.69
CALD1-214ENST00000466704 ITGA2BP08514 1039 aa4.49□□□□□ -1.69
CALD1-214ENST00000466704 CD63P08962 238 aa4.49□□□□□ -1.69
CALD1-214ENST00000466704 HOXD12P35452 270 aa4.49□□□□□ -1.69
CALD1-214ENST00000466704 SSBP2P81877 361 aaPredicted RBP4.49□□□□□ -1.69
CALD1-214ENST00000466704 HSF1Q00613 529 aa4.49□□□□□ -1.69
CALD1-214ENST00000466704 ZNF91Q05481 1191 aa4.49□□□□□ -1.69
CALD1-214ENST00000466704 RNASELQ05823 741 aaKnown RBP4.49□□□□□ -1.69
CALD1-214ENST00000466704 MTA1Q13330 715 aa4.49□□□□□ -1.69
CALD1-214ENST00000466704 AAK1Q2M2I8 961 aa4.49□□□□□ -1.69
CALD1-214ENST00000466704 GLE1Q53GS7 698 aaKnown RBP4.49□□□□□ -1.69
CALD1-214ENST00000466704 ZNF569Q5MCW4 686 aa4.49□□□□□ -1.69
CALD1-214ENST00000466704 ATPAF1Q5TC12 328 aaPredicted RBP4.49□□□□□ -1.69
CALD1-214ENST00000466704 WDR93Q6P2C0 686 aa4.49□□□□□ -1.69
CALD1-214ENST00000466704 TFAP2DQ7Z6R9 452 aa4.49□□□□□ -1.69
CALD1-214ENST00000466704 SRFBP1Q8NEF9 429 aaKnown RBP4.49□□□□□ -1.69
CALD1-214ENST00000466704 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.49□□□□□ -1.69
CALD1-214ENST00000466704 NPIPB3Q92617 1050 aa4.49□□□□□ -1.69
CALD1-214ENST00000466704 CELF1Q92879 486 aaKnown RBP4.49□□□□□ -1.69
CALD1-214ENST00000466704 MCRS1Q96EZ8 462 aa4.49□□□□□ -1.69
CALD1-214ENST00000466704 LTV1Q96GA3 475 aaPredicted RBP4.49□□□□□ -1.69
CALD1-214ENST00000466704 SLC39A13Q96H72 371 aa4.49□□□□□ -1.69
CALD1-214ENST00000466704 ZNF845Q96IR2 970 aaPredicted RBP4.49□□□□□ -1.69
CALD1-214ENST00000466704 TP63Q9H3D4 680 aaPredicted RBP4.49□□□□□ -1.69
CALD1-214ENST00000466704 CCDC134Q9H6E4 229 aa4.49□□□□□ -1.69
CALD1-214ENST00000466704 LRFN1Q9P244 771 aa4.49□□□□□ -1.69
CALD1-214ENST00000466704 RNF7Q9UBF6 113 aa4.49□□□□□ -1.69
CALD1-214ENST00000466704 ZNF70Q9UC06 446 aaPredicted RBP4.49□□□□□ -1.69
CALD1-214ENST00000466704 BTBD3Q9Y2F9 522 aa4.49□□□□□ -1.69
CALD1-214ENST00000466704 ARHGEF40Q8TER5 1519 aa4.49□□□□□ -1.69
CALD1-214ENST00000466704 ZNF518AQ6AHZ1 1483 aa4.49□□□□□ -1.69
CALD1-214ENST00000466704 PLEKHH2Q8IVE3 1493 aa4.49□□□□□ -1.69
CALD1-214ENST00000466704 ARHGEF17Q96PE2 2063 aaPredicted RBP4.49□□□□□ -1.69
CALD1-214ENST00000466704 CFAP74Q9C0B2 1584 aa4.48□□□□□ -1.69
CALD1-214ENST00000466704 SPAG9O60271 1321 aaKnown RBP4.48□□□□□ -1.69
CALD1-214ENST00000466704 ARID4BQ4LE39 1312 aaPredicted RBP4.48□□□□□ -1.69
CALD1-214ENST00000466704 MYOM3Q5VTT5 1437 aa4.48□□□□□ -1.69
CALD1-214ENST00000466704 MIA2Q96PC5 1412 aa4.48□□□□□ -1.69
CALD1-214ENST00000466704 YEATS2Q9ULM3 1422 aa4.48□□□□□ -1.69
CALD1-214ENST00000466704 ARHGEF12Q9NZN5 1544 aa4.48□□□□□ -1.69
CALD1-214ENST00000466704 LTBP4Q8N2S1 1624 aa4.48□□□□□ -1.69
CALD1-214ENST00000466704 C16orf96A6NNT2 1141 aa4.48□□□□□ -1.69
CALD1-214ENST00000466704 KIF28PB7ZC32 967 aa4.48□□□□□ -1.69
CALD1-214ENST00000466704 E5RJQ4 531 aa4.48□□□□□ -1.69
CALD1-214ENST00000466704 SYT5O00445 386 aa4.48□□□□□ -1.69
CALD1-214ENST00000466704 ADAM10O14672 748 aa4.48□□□□□ -1.69
CALD1-214ENST00000466704 ENO1P06733 434 aaKnown RBP4.48□□□□□ -1.69
CALD1-214ENST00000466704 TSPY4P0CV99 314 aa4.48□□□□□ -1.69
CALD1-214ENST00000466704 TSPY10P0CW01 314 aa4.48□□□□□ -1.69
CALD1-214ENST00000466704 GYS1P13807 737 aa4.48□□□□□ -1.69
CALD1-214ENST00000466704 ST6GAL1P15907 406 aa4.48□□□□□ -1.69
CALD1-214ENST00000466704 SFPQP23246 707 aaKnown RBP eCLIP4.48□□□□□ -1.69
CALD1-214ENST00000466704 PDIA3P30101 505 aaKnown RBP4.48□□□□□ -1.69
CALD1-214ENST00000466704 STAT6P42226 847 aa4.48□□□□□ -1.69
CALD1-214ENST00000466704 ZNF81P51508 661 aa4.48□□□□□ -1.69
CALD1-214ENST00000466704 RPS13P62277 151 aaKnown RBP4.48□□□□□ -1.69
CALD1-214ENST00000466704 ID2Q02363 134 aa4.48□□□□□ -1.69
CALD1-214ENST00000466704 BIRC2Q13490 618 aa4.48□□□□□ -1.69
CALD1-214ENST00000466704 STIM1Q13586 685 aa4.48□□□□□ -1.69
CALD1-214ENST00000466704 BLMHQ13867 455 aa4.48□□□□□ -1.69
CALD1-214ENST00000466704 KLF9Q13886 244 aaPredicted RBP4.48□□□□□ -1.69
CALD1-214ENST00000466704 TRIM14Q14142 442 aa4.48□□□□□ -1.69
CALD1-214ENST00000466704 BTBD16Q32M84 506 aa4.48□□□□□ -1.69
CALD1-214ENST00000466704 SLC9C1Q4G0N8 1177 aa4.48□□□□□ -1.69
CALD1-214ENST00000466704 Q4G0T1 1027 aa4.48□□□□□ -1.69
CALD1-214ENST00000466704 CCDC38Q502W7 563 aa4.48□□□□□ -1.69
CALD1-214ENST00000466704 KLHL17Q6TDP4 642 aa4.48□□□□□ -1.69
CALD1-214ENST00000466704 DHRS13Q6UX07 377 aa4.48□□□□□ -1.69
CALD1-214ENST00000466704 CCDC117Q8IWD4 279 aaPredicted RBP4.48□□□□□ -1.69
CALD1-214ENST00000466704 LAS2Q8IYD9 372 aa4.48□□□□□ -1.69
CALD1-214ENST00000466704 ENAHQ8N8S7 591 aaPredicted RBP4.48□□□□□ -1.69
CALD1-214ENST00000466704 HMGB4Q8WW32 186 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms