RNA–Protein interactions for RNA: ENST00000465768.1

SAMM50-202, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 169 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-202ENST00000465768 CFAP65Q6ZU64 1925 aaKnown RBP4.34□□□□□ -1.71
SAMM50-202ENST00000465768 PREX1Q8TCU6 1659 aa4.33□□□□□ -1.72
SAMM50-202ENST00000465768 EIF2AK4Q9P2K8 1649 aaKnown RBP4.33□□□□□ -1.72
SAMM50-202ENST00000465768 ABCC3O15438 1527 aa4.33□□□□□ -1.72
SAMM50-202ENST00000465768 FAM135AQ9P2D6 1515 aa4.33□□□□□ -1.72
SAMM50-202ENST00000465768 KANK1Q14678 1352 aa4.33□□□□□ -1.72
SAMM50-202ENST00000465768 CCDC187A0A096LP49 1063 aa4.33□□□□□ -1.72
SAMM50-202ENST00000465768 B9A039 149 aa4.33□□□□□ -1.72
SAMM50-202ENST00000465768 NKX2-8O15522 239 aa4.33□□□□□ -1.72
SAMM50-202ENST00000465768 PRAMEF2O60811 474 aa4.33□□□□□ -1.72
SAMM50-202ENST00000465768 FAM163BP0C2L3 166 aa4.33□□□□□ -1.72
SAMM50-202ENST00000465768 TMIGD3P0DMS9 266 aaPredicted RBP4.33□□□□□ -1.72
SAMM50-202ENST00000465768 ZNF37AP17032 561 aaPredicted RBP4.33□□□□□ -1.72
SAMM50-202ENST00000465768 PROZP22891 400 aa4.33□□□□□ -1.72
SAMM50-202ENST00000465768 SERPINA4P29622 427 aa4.33□□□□□ -1.72
SAMM50-202ENST00000465768 THBS4P35443 961 aa4.33□□□□□ -1.72
SAMM50-202ENST00000465768 IGHMBP2P38935 993 aaKnown RBP4.33□□□□□ -1.72
SAMM50-202ENST00000465768 CACNA2D1P54289 1103 aa4.33□□□□□ -1.72
SAMM50-202ENST00000465768 SOX10P56693 466 aa4.33□□□□□ -1.72
SAMM50-202ENST00000465768 CYP4F2P78329 520 aa4.33□□□□□ -1.72
SAMM50-202ENST00000465768 GPC5P78333 572 aa4.33□□□□□ -1.72
SAMM50-202ENST00000465768 CCDC15Q0P6D6 951 aa4.33□□□□□ -1.72
SAMM50-202ENST00000465768 SMAD1Q15797 465 aaKnown RBP4.33□□□□□ -1.72
SAMM50-202ENST00000465768 AAK1Q2M2I8 961 aa4.33□□□□□ -1.72
SAMM50-202ENST00000465768 PCID2Q5JVF3 399 aa4.33□□□□□ -1.72
SAMM50-202ENST00000465768 TMEM63BQ5T3F8 832 aa4.33□□□□□ -1.72
SAMM50-202ENST00000465768 DGAT2L7PQ6IED9 249 aa4.33□□□□□ -1.72
SAMM50-202ENST00000465768 ACSM6Q6P461 480 aa4.33□□□□□ -1.72
SAMM50-202ENST00000465768 KIRREL2Q6UWL6 708 aa4.33□□□□□ -1.72
SAMM50-202ENST00000465768 SLC29A4Q7RTT9 530 aa4.33□□□□□ -1.72
SAMM50-202ENST00000465768 HERC6Q8IVU3 1022 aa4.33□□□□□ -1.72
SAMM50-202ENST00000465768 FTSJ3Q8IY81 847 aaKnown RBP4.33□□□□□ -1.72
SAMM50-202ENST00000465768 C12orf76Q8N812 135 aaPredicted RBP4.33□□□□□ -1.72
SAMM50-202ENST00000465768 OR52L2PQ8NGH6 319 aa4.33□□□□□ -1.72
SAMM50-202ENST00000465768 HMGB4Q8WW32 186 aa4.33□□□□□ -1.72
SAMM50-202ENST00000465768 GLMPQ8WWB7 406 aa4.33□□□□□ -1.72
SAMM50-202ENST00000465768 RILPL2Q969X0 211 aa4.33□□□□□ -1.72
SAMM50-202ENST00000465768 C3orf49Q96BT1 292 aa4.33□□□□□ -1.72
SAMM50-202ENST00000465768 EVI5LQ96CN4 794 aa4.33□□□□□ -1.72
SAMM50-202ENST00000465768 KAZALD1Q96I82 304 aa4.33□□□□□ -1.72
SAMM50-202ENST00000465768 UBXN10Q96LJ8 280 aa4.33□□□□□ -1.72
SAMM50-202ENST00000465768 ZSCAN31Q96LW9 406 aaPredicted RBP4.33□□□□□ -1.72
SAMM50-202ENST00000465768 UROC1Q96N76 676 aa4.33□□□□□ -1.72
SAMM50-202ENST00000465768 MMS19Q96T76 1030 aa4.33□□□□□ -1.72
SAMM50-202ENST00000465768 MECRQ9BV79 373 aa4.33□□□□□ -1.72
SAMM50-202ENST00000465768 RNF26Q9BY78 433 aaPredicted RBP4.33□□□□□ -1.72
SAMM50-202ENST00000465768 CDCP1Q9H5V8 836 aa4.33□□□□□ -1.72
SAMM50-202ENST00000465768 LIN7CQ9NUP9 197 aaKnown RBP4.33□□□□□ -1.72
SAMM50-202ENST00000465768 RRN3Q9NYV6 651 aa4.33□□□□□ -1.72
SAMM50-202ENST00000465768 SLC17A6Q9P2U8 582 aa4.33□□□□□ -1.72
SAMM50-202ENST00000465768 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.33□□□□□ -1.72
SAMM50-202ENST00000465768 FZD4Q9ULV1 537 aa4.33□□□□□ -1.72
SAMM50-202ENST00000465768 ST3GAL5Q9UNP4 418 aa4.33□□□□□ -1.72
SAMM50-202ENST00000465768 LRRFIP2Q9Y608 721 aaKnown RBP4.33□□□□□ -1.72
SAMM50-202ENST00000465768 STRCQ7RTU9 1775 aa4.32□□□□□ -1.72
SAMM50-202ENST00000465768 CROCC2H7BZ55 1655 aa4.32□□□□□ -1.72
SAMM50-202ENST00000465768 MROH1Q8NDA8 1641 aa4.32□□□□□ -1.72
SAMM50-202ENST00000465768 RNF17Q9BXT8 1623 aaKnown RBP4.32□□□□□ -1.72
SAMM50-202ENST00000465768 PTPRTO14522 1441 aa4.32□□□□□ -1.72
SAMM50-202ENST00000465768 NUP155O75694 1391 aa4.32□□□□□ -1.72
SAMM50-202ENST00000465768 FAM90A20PA6NIJ5 464 aa4.32□□□□□ -1.72
SAMM50-202ENST00000465768 MBD3L5A6NJ08 208 aaPredicted RBP4.32□□□□□ -1.72
SAMM50-202ENST00000465768 H7C1Q1 480 aa4.32□□□□□ -1.72
SAMM50-202ENST00000465768 EIF3FO00303 357 aaPredicted RBP4.32□□□□□ -1.72
SAMM50-202ENST00000465768 NCAM2O15394 837 aa4.32□□□□□ -1.72
SAMM50-202ENST00000465768 PDE8BO95263 885 aa4.32□□□□□ -1.72
SAMM50-202ENST00000465768 TFRCP02786 760 aaKnown RBP4.32□□□□□ -1.72
SAMM50-202ENST00000465768 ALADP13716 330 aa4.32□□□□□ -1.72
SAMM50-202ENST00000465768 APEHP13798 732 aaKnown RBP4.32□□□□□ -1.72
SAMM50-202ENST00000465768 CXCR5P32302 372 aa4.32□□□□□ -1.72
SAMM50-202ENST00000465768 PLA2G5P39877 138 aa4.32□□□□□ -1.72
SAMM50-202ENST00000465768 PAPOLAP51003 745 aaKnown RBP4.32□□□□□ -1.72
SAMM50-202ENST00000465768 FAM3BP58499 235 aaPredicted RBP4.32□□□□□ -1.72
SAMM50-202ENST00000465768 ACTR2P61160 394 aa4.32□□□□□ -1.72
SAMM50-202ENST00000465768 RAE1P78406 368 aaKnown RBP4.32□□□□□ -1.72
SAMM50-202ENST00000465768 CFHR3Q02985 330 aa4.32□□□□□ -1.72
SAMM50-202ENST00000465768 POU5F1BQ06416 359 aa4.32□□□□□ -1.72
SAMM50-202ENST00000465768 CUL4BQ13620 913 aa4.32□□□□□ -1.72
SAMM50-202ENST00000465768 CBFBQ13951 182 aa4.32□□□□□ -1.72
SAMM50-202ENST00000465768 ERCC6LQ2NKX8 1250 aa4.32□□□□□ -1.72
SAMM50-202ENST00000465768 TBRG1Q3YBR2 411 aa4.32□□□□□ -1.72
SAMM50-202ENST00000465768 FAM153CQ494X1 144 aa4.32□□□□□ -1.72
SAMM50-202ENST00000465768 GALNTL6Q49A17 601 aa4.32□□□□□ -1.72
SAMM50-202ENST00000465768 ALFQ53S48 1182 aa4.32□□□□□ -1.72
SAMM50-202ENST00000465768 CEP85Q6P2H3 762 aa4.32□□□□□ -1.72
SAMM50-202ENST00000465768 C16orf89Q6UX73 402 aa4.32□□□□□ -1.72
SAMM50-202ENST00000465768 RRAGAQ7L523 313 aa4.32□□□□□ -1.72
SAMM50-202ENST00000465768 BCDIN3DQ7Z5W3 292 aaKnown RBP4.32□□□□□ -1.72
SAMM50-202ENST00000465768 C2CD5Q86YS7 1000 aa4.32□□□□□ -1.72
SAMM50-202ENST00000465768 RASAL3Q86YV0 1011 aa4.32□□□□□ -1.72
SAMM50-202ENST00000465768 TERB1Q8NA31 727 aa4.32□□□□□ -1.72
SAMM50-202ENST00000465768 SLC2A12Q8TD20 617 aa4.32□□□□□ -1.72
SAMM50-202ENST00000465768 PRR11Q96HE9 360 aaPredicted RBP4.32□□□□□ -1.72
SAMM50-202ENST00000465768 REXO5Q96IC2 774 aaKnown RBP4.32□□□□□ -1.72
SAMM50-202ENST00000465768 PYM1Q9BRP8 204 aaKnown RBP4.32□□□□□ -1.72
SAMM50-202ENST00000465768 CIPCQ9C0C6 399 aa4.32□□□□□ -1.72
SAMM50-202ENST00000465768 BRD8Q9H0E9 1235 aa4.32□□□□□ -1.72
SAMM50-202ENST00000465768 TAF1DQ9H5J8 278 aaPredicted RBP4.32□□□□□ -1.72
SAMM50-202ENST00000465768 CCDC134Q9H6E4 229 aa4.32□□□□□ -1.72
SAMM50-202ENST00000465768 TMLHEQ9NVH6 421 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms