RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 LENG8Q96PV6 779 aaPredicted RBP20.26■□□□□ 0.83
SDF4-205ENST00000465727 ZNF670Q9BS34 389 aa20.26■□□□□ 0.83
SDF4-205ENST00000465727 ZNF70Q9UC06 446 aaPredicted RBP20.26■□□□□ 0.83
SDF4-205ENST00000465727 CTDP1Q9Y5B0 961 aaPredicted RBP20.26■□□□□ 0.83
SDF4-205ENST00000465727 PRSS51A0A1B0GVH4 220 aa20.25■□□□□ 0.83
SDF4-205ENST00000465727 OGTO15294 1046 aa20.25■□□□□ 0.83
SDF4-205ENST00000465727 H2AFYO75367 372 aaKnown RBP20.25■□□□□ 0.83
SDF4-205ENST00000465727 METTL18O95568 372 aa20.25■□□□□ 0.83
SDF4-205ENST00000465727 OATP04181 439 aa20.25■□□□□ 0.83
SDF4-205ENST00000465727 PROZP22891 400 aa20.25■□□□□ 0.83
SDF4-205ENST00000465727 ADSLP30566 484 aaPredicted RBP20.25■□□□□ 0.83
SDF4-205ENST00000465727 HK2P52789 917 aa20.25■□□□□ 0.83
SDF4-205ENST00000465727 MRPS22P82650 360 aaKnown RBP20.25■□□□□ 0.83
SDF4-205ENST00000465727 ZNF423Q2M1K9 1284 aa20.25■□□□□ 0.83
SDF4-205ENST00000465727 IYDQ6PHW0 289 aa20.25■□□□□ 0.83
SDF4-205ENST00000465727 FERMT1Q9BQL6 677 aa20.25■□□□□ 0.83
SDF4-205ENST00000465727 BCO2Q9BYV7 579 aa20.25■□□□□ 0.83
SDF4-205ENST00000465727 PDZD7Q9H5P4 517 aa20.25■□□□□ 0.83
SDF4-205ENST00000465727 MORF4L1Q9UBU8 362 aa20.25■□□□□ 0.83
SDF4-205ENST00000465727 PCDHGB4Q9UN71 923 aa20.25■□□□□ 0.83
SDF4-205ENST00000465727 PCDHGB5Q9Y5G0 923 aa20.25■□□□□ 0.83
SDF4-205ENST00000465727 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.25■□□□□ 0.83
SDF4-205ENST00000465727 TTC36A6NLP5 189 aa20.25■□□□□ 0.83
SDF4-205ENST00000465727 E9PBE3 544 aa20.25■□□□□ 0.83
SDF4-205ENST00000465727 KLHL41O60662 606 aa20.25■□□□□ 0.83
SDF4-205ENST00000465727 TNNC2P02585 160 aa20.25■□□□□ 0.83
SDF4-205ENST00000465727 PDGFRAP16234 1089 aa20.25■□□□□ 0.83
SDF4-205ENST00000465727 GARSP41250 739 aaKnown RBP20.25■□□□□ 0.83
SDF4-205ENST00000465727 EFNA5P52803 228 aa20.25■□□□□ 0.83
SDF4-205ENST00000465727 LPIN1Q14693 890 aa20.25■□□□□ 0.83
SDF4-205ENST00000465727 SLC27A3Q5K4L6 730 aa20.25■□□□□ 0.83
SDF4-205ENST00000465727 RXFP2Q8WXD0 754 aa20.25■□□□□ 0.83
SDF4-205ENST00000465727 STON2Q8WXE9 905 aa20.25■□□□□ 0.83
SDF4-205ENST00000465727 NAT9Q9BTE0 207 aa20.25■□□□□ 0.83
SDF4-205ENST00000465727 MRPL4Q9BYD3 311 aaKnown RBP20.25■□□□□ 0.83
SDF4-205ENST00000465727 PCDH18Q9HCL0 1135 aa20.25■□□□□ 0.83
SDF4-205ENST00000465727 TCF7L2Q9NQB0 619 aa20.25■□□□□ 0.83
SDF4-205ENST00000465727 TMEM216Q9P0N5 145 aa20.25■□□□□ 0.83
SDF4-205ENST00000465727 CLRN2A0PK11 232 aa20.24■□□□□ 0.83
SDF4-205ENST00000465727 MICAL2O94851 1124 aa20.24■□□□□ 0.83
SDF4-205ENST00000465727 PSMC3P17980 439 aa20.24■□□□□ 0.83
SDF4-205ENST00000465727 CDK9P50750 372 aaKnown RBP20.24■□□□□ 0.83
SDF4-205ENST00000465727 THOP1P52888 689 aa20.24■□□□□ 0.83
SDF4-205ENST00000465727 PTPN11Q06124 597 aaPredicted RBP20.24■□□□□ 0.83
SDF4-205ENST00000465727 TMED1Q13445 227 aa20.24■□□□□ 0.83
SDF4-205ENST00000465727 DHRS4L2Q6PKH6 230 aa20.24■□□□□ 0.83
SDF4-205ENST00000465727 DSELQ8IZU8 1212 aa20.24■□□□□ 0.83
SDF4-205ENST00000465727 PGAM4Q8N0Y7 254 aa20.24■□□□□ 0.83
SDF4-205ENST00000465727 PCDH19Q8TAB3 1148 aa20.24■□□□□ 0.83
SDF4-205ENST00000465727 FNDC8Q8TC99 324 aa20.24■□□□□ 0.83
SDF4-205ENST00000465727 NLRP7Q8WX94 980 aa20.24■□□□□ 0.83
SDF4-205ENST00000465727 JDP2Q8WYK2 163 aa20.24■□□□□ 0.83
SDF4-205ENST00000465727 ANKRD36BP1Q96IX9 119 aa20.24■□□□□ 0.83
SDF4-205ENST00000465727 TCHPQ9BT92 498 aa20.24■□□□□ 0.83
SDF4-205ENST00000465727 COPS7BQ9H9Q2 264 aaPredicted RBP20.24■□□□□ 0.83
SDF4-205ENST00000465727 CPSF3Q9UKF6 684 aaKnown RBP20.24■□□□□ 0.83
SDF4-205ENST00000465727 MAFBQ9Y5Q3 323 aaPredicted RBP20.24■□□□□ 0.83
SDF4-205ENST00000465727 SSC5DA1L4H1 1573 aa20.24■□□□□ 0.83
SDF4-205ENST00000465727 AIM2O14862 343 aa20.23■□□□□ 0.83
SDF4-205ENST00000465727 HSPA4LO95757 839 aa20.23■□□□□ 0.83
SDF4-205ENST00000465727 HNRNPCP07910 306 aaKnown RBP eCLIP20.23■□□□□ 0.83
SDF4-205ENST00000465727 PIK3R1P27986 724 aa20.23■□□□□ 0.83
SDF4-205ENST00000465727 GPD2P43304 727 aa20.23■□□□□ 0.83
SDF4-205ENST00000465727 GALK1P51570 392 aa20.23■□□□□ 0.83
SDF4-205ENST00000465727 COG7P83436 770 aa20.23■□□□□ 0.83
SDF4-205ENST00000465727 TFAMQ00059 246 aaKnown RBP20.23■□□□□ 0.83
SDF4-205ENST00000465727 SP4Q02446 784 aa20.23■□□□□ 0.83
SDF4-205ENST00000465727 C6orf52Q5T4I8 152 aa20.23■□□□□ 0.83
SDF4-205ENST00000465727 SH3PXD2AQ5TCZ1 1133 aa20.23■□□□□ 0.83
SDF4-205ENST00000465727 FKBP1CQ5VVH2 108 aa20.23■□□□□ 0.83
SDF4-205ENST00000465727 KPNA7A9QM74 516 aa20.23■□□□□ 0.83
SDF4-205ENST00000465727 H3BSA7 217 aa20.23■□□□□ 0.83
SDF4-205ENST00000465727 BCAS2O75934 225 aaPredicted RBP20.23■□□□□ 0.83
SDF4-205ENST00000465727 RGS20O76081 388 aa20.23■□□□□ 0.83
SDF4-205ENST00000465727 HOXC6P09630 235 aa20.23■□□□□ 0.83
SDF4-205ENST00000465727 ZFXP17010 805 aaPredicted RBP20.23■□□□□ 0.83
SDF4-205ENST00000465727 PGAM1P18669 254 aa20.23■□□□□ 0.83
SDF4-205ENST00000465727 TYK2P29597 1187 aa20.23■□□□□ 0.83
SDF4-205ENST00000465727 CAPSQ13938 189 aa20.23■□□□□ 0.83
SDF4-205ENST00000465727 PRKG1Q13976 671 aa20.23■□□□□ 0.83
SDF4-205ENST00000465727 BAATQ14032 418 aaPredicted RBP20.23■□□□□ 0.83
SDF4-205ENST00000465727 STILQ15468 1287 aa20.23■□□□□ 0.83
SDF4-205ENST00000465727 SLC9B1Q4ZJI4 515 aa20.23■□□□□ 0.83
SDF4-205ENST00000465727 CDAN1Q8IWY9 1227 aa20.23■□□□□ 0.83
SDF4-205ENST00000465727 LILRA2Q8N149 483 aa20.23■□□□□ 0.83
SDF4-205ENST00000465727 TSPAN14Q8NG11 270 aa20.23■□□□□ 0.83
SDF4-205ENST00000465727 NSUN6Q8TEA1 469 aaKnown RBP20.23■□□□□ 0.83
SDF4-205ENST00000465727 ABTB1Q969K4 478 aaPredicted RBP20.23■□□□□ 0.83
SDF4-205ENST00000465727 ISL2Q96A47 359 aa20.23■□□□□ 0.83
SDF4-205ENST00000465727 CDRT15Q96T59 188 aa20.23■□□□□ 0.83
SDF4-205ENST00000465727 NIFKQ9BYG3 293 aaKnown RBP20.23■□□□□ 0.83
SDF4-205ENST00000465727 TXNDC16Q9P2K2 825 aa20.23■□□□□ 0.83
SDF4-205ENST00000465727 NXF1Q9UBU9 619 aaKnown RBP20.23■□□□□ 0.83
SDF4-205ENST00000465727 WDR27A2RRH5 827 aa20.22■□□□□ 0.83
SDF4-205ENST00000465727 M0QYV0 167 aa20.22■□□□□ 0.83
SDF4-205ENST00000465727 DPYSL4O14531 572 aa20.22■□□□□ 0.83
SDF4-205ENST00000465727 MDM4O15151 490 aa20.22■□□□□ 0.83
SDF4-205ENST00000465727 ME2P23368 584 aa20.22■□□□□ 0.83
SDF4-205ENST00000465727 ADORA2AP29274 412 aa20.22■□□□□ 0.83
SDF4-205ENST00000465727 NR2C2P49116 596 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms