RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 HSF2BPO75031 334 aa22.57■■□□□ 1.2
LIME1-203ENST00000465591 APOEP02649 317 aa22.57■■□□□ 1.2
LIME1-203ENST00000465591 CDH5P33151 784 aaPredicted RBP22.57■■□□□ 1.2
LIME1-203ENST00000465591 COPAP53621 1224 aa22.57■■□□□ 1.2
LIME1-203ENST00000465591 BPIFB4P59827 614 aa22.57■■□□□ 1.2
LIME1-203ENST00000465591 FOXK2Q01167 660 aa22.57■■□□□ 1.2
LIME1-203ENST00000465591 SLC6A3Q01959 620 aa22.57■■□□□ 1.2
LIME1-203ENST00000465591 RPL6Q02878 288 aaKnown RBP22.57■■□□□ 1.2
LIME1-203ENST00000465591 LMAN2Q12907 356 aa22.57■■□□□ 1.2
LIME1-203ENST00000465591 STARD3Q14849 445 aa22.57■■□□□ 1.2
LIME1-203ENST00000465591 STX1AQ16623 288 aa22.57■■□□□ 1.2
LIME1-203ENST00000465591 FSCBQ5H9T9 825 aa22.57■■□□□ 1.2
LIME1-203ENST00000465591 EFHC1Q5JVL4 640 aa22.57■■□□□ 1.2
LIME1-203ENST00000465591 CCDC183Q5T5S1 534 aa22.57■■□□□ 1.2
LIME1-203ENST00000465591 OTUD1Q5VV17 481 aaPredicted RBP22.57■■□□□ 1.2
LIME1-203ENST00000465591 SERPINA13PQ6UXR4 307 aa22.57■■□□□ 1.2
LIME1-203ENST00000465591 MMS22LQ6ZRQ5 1243 aa22.57■■□□□ 1.2
LIME1-203ENST00000465591 MFN1Q8IWA4 741 aa22.57■■□□□ 1.2
LIME1-203ENST00000465591 LGI2Q8N0V4 545 aa22.57■■□□□ 1.2
LIME1-203ENST00000465591 AHI1Q8N157 1196 aa22.57■■□□□ 1.2
LIME1-203ENST00000465591 FIBINQ8TAL6 211 aa22.57■■□□□ 1.2
LIME1-203ENST00000465591 NOX5Q96PH1 765 aa22.57■■□□□ 1.2
LIME1-203ENST00000465591 DDX50Q9BQ39 737 aaKnown RBP22.57■■□□□ 1.2
LIME1-203ENST00000465591 HSD3B7Q9H2F3 369 aa22.57■■□□□ 1.2
LIME1-203ENST00000465591 TMEM245Q9H330 911 aa22.57■■□□□ 1.2
LIME1-203ENST00000465591 FAM204AQ9H8W3 233 aa22.57■■□□□ 1.2
LIME1-203ENST00000465591 COX16Q9P0S2 106 aa22.57■■□□□ 1.2
LIME1-203ENST00000465591 TMEM63CQ9P1W3 806 aa22.57■■□□□ 1.2
LIME1-203ENST00000465591 INTS6Q9UL03 887 aaKnown RBP22.57■■□□□ 1.2
LIME1-203ENST00000465591 LNP1A1A4G5 178 aa22.56■■□□□ 1.2
LIME1-203ENST00000465591 KCNU1A8MYU2 1149 aa22.56■■□□□ 1.2
LIME1-203ENST00000465591 ZBTB24O43167 697 aaPredicted RBP22.56■■□□□ 1.2
LIME1-203ENST00000465591 ZNF217O75362 1048 aa22.56■■□□□ 1.2
LIME1-203ENST00000465591 DAB1O75553 588 aa22.56■■□□□ 1.2
LIME1-203ENST00000465591 EPHX1P07099 455 aa22.56■■□□□ 1.2
LIME1-203ENST00000465591 TACR2P21452 398 aa22.56■■□□□ 1.2
LIME1-203ENST00000465591 ITPKAP23677 461 aa22.56■■□□□ 1.2
LIME1-203ENST00000465591 COPB1P53618 953 aaKnown RBP22.56■■□□□ 1.2
LIME1-203ENST00000465591 LIMK1P53667 647 aa22.56■■□□□ 1.2
LIME1-203ENST00000465591 CDK17Q00537 523 aa22.56■■□□□ 1.2
LIME1-203ENST00000465591 NCAPHQ15003 741 aa22.56■■□□□ 1.2
LIME1-203ENST00000465591 STPG1Q5TH74 334 aa22.56■■□□□ 1.2
LIME1-203ENST00000465591 SLC26A9Q7LBE3 791 aa22.56■■□□□ 1.2
LIME1-203ENST00000465591 CHSY1Q86X52 802 aa22.56■■□□□ 1.2
LIME1-203ENST00000465591 CACUL1Q86Y37 369 aa22.56■■□□□ 1.2
LIME1-203ENST00000465591 SLC41A1Q8IVJ1 513 aa22.56■■□□□ 1.2
LIME1-203ENST00000465591 CARNMT1Q8N4J0 409 aa22.56■■□□□ 1.2
LIME1-203ENST00000465591 EPS8L1Q8TE68 723 aa22.56■■□□□ 1.2
LIME1-203ENST00000465591 PRMT1Q99873 361 aaKnown RBP22.56■■□□□ 1.2
LIME1-203ENST00000465591 PRDM16Q9HAZ2 1276 aa22.56■■□□□ 1.2
LIME1-203ENST00000465591 DDIT4Q9NX09 232 aa22.56■■□□□ 1.2
LIME1-203ENST00000465591 SIK3Q9Y2K2 1263 aa22.56■■□□□ 1.2
LIME1-203ENST00000465591 ASCC3Q8N3C0 2202 aaKnown RBP22.55■■□□□ 1.2
LIME1-203ENST00000465591 SYNCRIPO60506 623 aaKnown RBP22.55■■□□□ 1.2
LIME1-203ENST00000465591 MBD3O95983 291 aa22.55■■□□□ 1.2
LIME1-203ENST00000465591 MMEP08473 750 aa22.55■■□□□ 1.2
LIME1-203ENST00000465591 TFE3P19532 575 aaPredicted RBP22.55■■□□□ 1.2
LIME1-203ENST00000465591 MYL5Q02045 173 aa22.55■■□□□ 1.2
LIME1-203ENST00000465591 ARID5AQ03989 594 aa22.55■■□□□ 1.2
LIME1-203ENST00000465591 FNDC3BQ53EP0 1204 aaKnown RBP22.55■■□□□ 1.2
LIME1-203ENST00000465591 C2CD6Q53TS8 623 aa22.55■■□□□ 1.2
LIME1-203ENST00000465591 SPDYCQ5MJ68 293 aa22.55■■□□□ 1.2
LIME1-203ENST00000465591 LYSMD4Q5XG99 296 aa22.55■■□□□ 1.2
LIME1-203ENST00000465591 SLC36A4Q6YBV0 504 aa22.55■■□□□ 1.2
LIME1-203ENST00000465591 TMPRSS6Q8IU80 811 aa22.55■■□□□ 1.2
LIME1-203ENST00000465591 TMEM35BQ8NCS4 154 aa22.55■■□□□ 1.2
LIME1-203ENST00000465591 ZNF397Q8NF99 534 aaPredicted RBP22.55■■□□□ 1.2
LIME1-203ENST00000465591 SLC20A1Q8WUM9 679 aa22.55■■□□□ 1.2
LIME1-203ENST00000465591 BTN2A3PQ96KV6 586 aa22.55■■□□□ 1.2
LIME1-203ENST00000465591 EDEM2Q9BV94 578 aa22.55■■□□□ 1.2
LIME1-203ENST00000465591 SYNCQ9H7C4 482 aa22.55■■□□□ 1.2
LIME1-203ENST00000465591 FAM207AQ9NSI2 230 aaPredicted RBP22.55■■□□□ 1.2
LIME1-203ENST00000465591 SLTMQ9NWH9 1034 aaKnown RBP eCLIP22.55■■□□□ 1.22e-10■■□□□ 12.5
LIME1-203ENST00000465591 USP36Q9P275 1121 aaKnown RBP22.55■■□□□ 1.2
LIME1-203ENST00000465591 LIMA1Q9UHB6 759 aaKnown RBP22.55■■□□□ 1.2
LIME1-203ENST00000465591 CEP83Q9Y592 693 aa22.55■■□□□ 1.2
LIME1-203ENST00000465591 TM4SF5O14894 197 aa22.54■■□□□ 1.2
LIME1-203ENST00000465591 AP5Z1O43299 807 aa22.54■■□□□ 1.2
LIME1-203ENST00000465591 LUC7L3O95232 432 aaKnown RBP22.54■■□□□ 1.2
LIME1-203ENST00000465591 DLDP09622 509 aaKnown RBP22.54■■□□□ 1.2
LIME1-203ENST00000465591 ZNF18P17022 549 aa22.54■■□□□ 1.2
LIME1-203ENST00000465591 POLR2FP61218 127 aaKnown RBP22.54■■□□□ 1.2
LIME1-203ENST00000465591 IRX4P78413 519 aa22.54■■□□□ 1.2
LIME1-203ENST00000465591 CAMK2GQ13555 558 aaPredicted RBP22.54■■□□□ 1.2
LIME1-203ENST00000465591 APTXQ7Z2E3 356 aaKnown RBP22.54■■□□□ 1.2
LIME1-203ENST00000465591 METTL3Q86U44 580 aaKnown RBP22.54■■□□□ 1.2
LIME1-203ENST00000465591 CIR1Q86X95 450 aaPredicted RBP22.54■■□□□ 1.2
LIME1-203ENST00000465591 SYT12Q8IV01 421 aa22.54■■□□□ 1.2
LIME1-203ENST00000465591 MYO19Q96H55 970 aa22.54■■□□□ 1.2
LIME1-203ENST00000465591 PDCL3Q9H2J4 239 aa22.54■■□□□ 1.2
LIME1-203ENST00000465591 MTG2Q9H4K7 406 aa22.54■■□□□ 1.2
LIME1-203ENST00000465591 NLRC4Q9NPP4 1024 aa22.54■■□□□ 1.2
LIME1-203ENST00000465591 NOCTQ9UK39 431 aaKnown RBP22.54■■□□□ 1.2
LIME1-203ENST00000465591 PILRBQ9UKJ0 227 aa22.54■■□□□ 1.2
LIME1-203ENST00000465591 CACNA1EQ15878 2313 aa22.53■■□□□ 1.2
LIME1-203ENST00000465591 KHNYNO15037 678 aaKnown RBP22.53■■□□□ 1.2
LIME1-203ENST00000465591 GFPT2O94808 682 aa22.53■■□□□ 1.2
LIME1-203ENST00000465591 POLR2EP19388 210 aaKnown RBP22.53■■□□□ 1.2
LIME1-203ENST00000465591 CSKP41240 450 aa22.53■■□□□ 1.2
LIME1-203ENST00000465591 GABRB2P47870 512 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms