RNA–Protein interactions for RNA: ENST00000465425.1

SYNE4-204, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-204ENST00000465425 LMNTD2Q8IXW0 634 aa18.84■□□□□ 0.61
SYNE4-204ENST00000465425 SIX6OS1Q8N1H7 587 aa18.84■□□□□ 0.61
SYNE4-204ENST00000465425 ZC3H15Q8WU90 426 aaKnown RBP18.84■□□□□ 0.61
SYNE4-204ENST00000465425 FAM161BQ96MY7 647 aa18.84■□□□□ 0.61
SYNE4-204ENST00000465425 SIKE1Q9BRV8 207 aa18.84■□□□□ 0.61
SYNE4-204ENST00000465425 TINF2Q9BSI4 451 aa18.84■□□□□ 0.61
SYNE4-204ENST00000465425 DUSP16Q9BY84 665 aa18.84■□□□□ 0.61
SYNE4-204ENST00000465425 LRRC4Q9HBW1 653 aa18.84■□□□□ 0.61
SYNE4-204ENST00000465425 DCDC2Q9UHG0 476 aa18.84■□□□□ 0.61
SYNE4-204ENST00000465425 PLXNB2O15031 1838 aa18.83■□□□□ 0.61
SYNE4-204ENST00000465425 CAPN9O14815 690 aa18.83■□□□□ 0.61
SYNE4-204ENST00000465425 LIN7AO14910 233 aaPredicted RBP18.83■□□□□ 0.61
SYNE4-204ENST00000465425 KIF1CO43896 1103 aaKnown RBP18.83■□□□□ 0.61
SYNE4-204ENST00000465425 KRT36O76013 467 aa18.83■□□□□ 0.61
SYNE4-204ENST00000465425 PSMG1O95456 288 aa18.83■□□□□ 0.61
SYNE4-204ENST00000465425 SERPINA6P08185 405 aa18.83■□□□□ 0.61
SYNE4-204ENST00000465425 PDE1CQ14123 709 aaPredicted RBP18.83■□□□□ 0.61
SYNE4-204ENST00000465425 IQSEC1Q6DN90 963 aa18.83■□□□□ 0.61
SYNE4-204ENST00000465425 GPR142Q7Z601 462 aa18.83■□□□□ 0.61
SYNE4-204ENST00000465425 RASSF3Q86WH2 238 aa18.83■□□□□ 0.61
SYNE4-204ENST00000465425 PIWIL2Q8TC59 973 aaKnown RBP18.83■□□□□ 0.61
SYNE4-204ENST00000465425 WDR60Q8WVS4 1066 aa18.83■□□□□ 0.61
SYNE4-204ENST00000465425 ARNTL2Q8WYA1 636 aa18.83■□□□□ 0.61
SYNE4-204ENST00000465425 PRDM12Q9H4Q4 367 aa18.83■□□□□ 0.61
SYNE4-204ENST00000465425 TMPRSS4Q9NRS4 437 aa18.83■□□□□ 0.61
SYNE4-204ENST00000465425 NVLO15381 856 aaKnown RBP18.83■□□□□ 0.6
SYNE4-204ENST00000465425 ITGA2BP08514 1039 aa18.83■□□□□ 0.6
SYNE4-204ENST00000465425 NPR3P17342 541 aa18.83■□□□□ 0.6
SYNE4-204ENST00000465425 RPL10AP62906 217 aaKnown RBP18.83■□□□□ 0.6
SYNE4-204ENST00000465425 PITX1P78337 314 aaPredicted RBP18.83■□□□□ 0.6
SYNE4-204ENST00000465425 MXRA7P84157 204 aa18.83■□□□□ 0.6
SYNE4-204ENST00000465425 DEUP1Q05D60 604 aa18.83■□□□□ 0.6
SYNE4-204ENST00000465425 LDLRAD1Q5T700 205 aa18.83■□□□□ 0.6
SYNE4-204ENST00000465425 PID1Q7Z2X4 250 aa18.83■□□□□ 0.6
SYNE4-204ENST00000465425 RBM15BQ8NDT2 890 aaKnown RBP18.83■□□□□ 0.6
SYNE4-204ENST00000465425 HNRNPABQ99729 332 aaKnown RBP18.83■□□□□ 0.6
SYNE4-204ENST00000465425 SYBUQ9NX95 663 aa18.83■□□□□ 0.6
SYNE4-204ENST00000465425 SUFUQ9UMX1 484 aa18.83■□□□□ 0.6
SYNE4-204ENST00000465425 SF3B1O75533 1304 aaKnown RBP eCLIP18.82■□□□□ 0.6
SYNE4-204ENST00000465425 EEF2KO00418 725 aaKnown RBP18.82■□□□□ 0.6
SYNE4-204ENST00000465425 DYNC1LI2O43237 492 aaPredicted RBP18.82■□□□□ 0.6
SYNE4-204ENST00000465425 MAGEC1O60732 1142 aa18.82■□□□□ 0.6
SYNE4-204ENST00000465425 ACADSP16219 412 aa18.82■□□□□ 0.6
SYNE4-204ENST00000465425 KCNA4P22459 653 aa18.82■□□□□ 0.6
SYNE4-204ENST00000465425 THOC5Q13769 683 aaKnown RBP18.82■□□□□ 0.6
SYNE4-204ENST00000465425 BLMHQ13867 455 aa18.82■□□□□ 0.6
SYNE4-204ENST00000465425 SMAD1Q15797 465 aaKnown RBP18.82■□□□□ 0.6
SYNE4-204ENST00000465425 C6orf163Q5TEZ5 329 aa18.82■□□□□ 0.6
SYNE4-204ENST00000465425 SNX30Q5VWJ9 437 aa18.82■□□□□ 0.6
SYNE4-204ENST00000465425 ZNF567Q8N184 647 aa18.82■□□□□ 0.6
SYNE4-204ENST00000465425 DNAJB3Q8WWF6 145 aa18.82■□□□□ 0.6
SYNE4-204ENST00000465425 RNF39Q9H2S5 420 aa18.82■□□□□ 0.6
SYNE4-204ENST00000465425 SBF1O95248 1867 aa18.82■□□□□ 0.6
SYNE4-204ENST00000465425 CLDN5O00501 218 aa18.82■□□□□ 0.6
SYNE4-204ENST00000465425 CAPN15O75808 1086 aa18.82■□□□□ 0.6
SYNE4-204ENST00000465425 KCNE1P15382 129 aa18.82■□□□□ 0.6
SYNE4-204ENST00000465425 EPHX2P34913 555 aa18.82■□□□□ 0.6
SYNE4-204ENST00000465425 SLC1A6P48664 564 aa18.82■□□□□ 0.6
SYNE4-204ENST00000465425 LILRA4P59901 499 aa18.82■□□□□ 0.6
SYNE4-204ENST00000465425 SLC34A1Q06495 639 aa18.82■□□□□ 0.6
SYNE4-204ENST00000465425 SOX4Q06945 474 aaPredicted RBP18.82■□□□□ 0.6
SYNE4-204ENST00000465425 ZRSR2Q15696 482 aaKnown RBP18.82■□□□□ 0.6
SYNE4-204ENST00000465425 DNAL1Q4LDG9 190 aa18.82■□□□□ 0.6
SYNE4-204ENST00000465425 CMPK2Q5EBM0 449 aa18.82■□□□□ 0.6
SYNE4-204ENST00000465425 MBLAC2Q68D91 279 aa18.82■□□□□ 0.6
SYNE4-204ENST00000465425 RFX8Q6ZV50 586 aa18.82■□□□□ 0.6
SYNE4-204ENST00000465425 PPP4R1Q8TF05 950 aa18.82■□□□□ 0.6
SYNE4-204ENST00000465425 LBHD1Q9BQE6 289 aaPredicted RBP18.82■□□□□ 0.6
SYNE4-204ENST00000465425 EBF4Q9BQW3 602 aa18.82■□□□□ 0.6
SYNE4-204ENST00000465425 CCDC106Q9BWC9 280 aa18.82■□□□□ 0.6
SYNE4-204ENST00000465425 NMRK1Q9NWW6 199 aa18.82■□□□□ 0.6
SYNE4-204ENST00000465425 DONSONQ9NYP3 566 aa18.82■□□□□ 0.6
SYNE4-204ENST00000465425 KLHL8Q9P2G9 620 aaPredicted RBP18.82■□□□□ 0.6
SYNE4-204ENST00000465425 DNAJC16Q9Y2G8 782 aa18.82■□□□□ 0.6
SYNE4-204ENST00000465425 PSAT1Q9Y617 370 aa18.82■□□□□ 0.6
SYNE4-204ENST00000465425 RPS6KL1Q9Y6S9 549 aa18.82■□□□□ 0.6
SYNE4-204ENST00000465425 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.82■□□□□ 0.6
SYNE4-204ENST00000465425 MYO18AQ92614 2054 aaKnown RBP18.81■□□□□ 0.6
SYNE4-204ENST00000465425 ADCY6O43306 1168 aa18.81■□□□□ 0.6
SYNE4-204ENST00000465425 PLIN3O60664 434 aa18.81■□□□□ 0.6
SYNE4-204ENST00000465425 CIB2O75838 187 aa18.81■□□□□ 0.6
SYNE4-204ENST00000465425 TYK2P29597 1187 aa18.81■□□□□ 0.6
SYNE4-204ENST00000465425 GARSP41250 739 aaKnown RBP18.81■□□□□ 0.6
SYNE4-204ENST00000465425 RAP1GDS1P52306 607 aa18.81■□□□□ 0.6
SYNE4-204ENST00000465425 SNX17Q15036 470 aa18.81■□□□□ 0.6
SYNE4-204ENST00000465425 DTX3LQ8TDB6 740 aa18.81■□□□□ 0.6
SYNE4-204ENST00000465425 TMEM40Q8WWA1 233 aa18.81■□□□□ 0.6
SYNE4-204ENST00000465425 TSPAN18Q96SJ8 248 aa18.81■□□□□ 0.6
SYNE4-204ENST00000465425 NPY6RQ99463 290 aa18.81■□□□□ 0.6
SYNE4-204ENST00000465425 MED10Q9BTT4 135 aa18.81■□□□□ 0.6
SYNE4-204ENST00000465425 OSBPL1AQ9BXW6 950 aa18.81■□□□□ 0.6
SYNE4-204ENST00000465425 EMCNQ9ULC0 261 aa18.81■□□□□ 0.6
SYNE4-204ENST00000465425 SORCS3Q9UPU3 1222 aa18.81■□□□□ 0.6
SYNE4-204ENST00000465425 PRR5-ARHGAP8B1AHC4 643 aa18.8■□□□□ 0.6
SYNE4-204ENST00000465425 BTBD19C9JJ37 291 aa18.8■□□□□ 0.6
SYNE4-204ENST00000465425 LYPLA1O75608 230 aaPredicted RBP18.8■□□□□ 0.6
SYNE4-204ENST00000465425 WARSP23381 471 aaKnown RBP18.8■□□□□ 0.6
SYNE4-204ENST00000465425 ACAT1P24752 427 aaKnown RBP18.8■□□□□ 0.6
SYNE4-204ENST00000465425 ABL2P42684 1182 aa18.8■□□□□ 0.6
SYNE4-204ENST00000465425 NDUFV1P49821 464 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms