RNA–Protein interactions for RNA: ENST00000465282.5

USP39-211, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-211ENST00000465282 CCDC117Q8IWD4 279 aaPredicted RBP17.53■□□□□ 0.4
USP39-211ENST00000465282 FOXQ1Q9C009 403 aa17.53■□□□□ 0.4
USP39-211ENST00000465282 OSBPL2Q9H1P3 480 aa17.53■□□□□ 0.4
USP39-211ENST00000465282 RETREG1Q9H6L5 497 aa17.53■□□□□ 0.4
USP39-211ENST00000465282 DNAJC17Q9NVM6 304 aaKnown RBP17.53■□□□□ 0.4
USP39-211ENST00000465282 CTTNBP2NLQ9P2B4 639 aa17.53■□□□□ 0.4
USP39-211ENST00000465282 XPO7Q9UIA9 1087 aaKnown RBP17.53■□□□□ 0.4
USP39-211ENST00000465282 NDRG2Q9UN36 371 aaKnown RBP17.53■□□□□ 0.4
USP39-211ENST00000465282 SLC27A6Q9Y2P4 619 aa17.53■□□□□ 0.4
USP39-211ENST00000465282 HS3ST4Q9Y661 456 aa17.53■□□□□ 0.4
USP39-211ENST00000465282 ZDBF2Q9HCK1 2354 aa17.52■□□□□ 0.4
USP39-211ENST00000465282 GOLGA6L7A0A1B0GV03 622 aa17.52■□□□□ 0.4
USP39-211ENST00000465282 MTA2O94776 668 aa17.52■□□□□ 0.4
USP39-211ENST00000465282 CHRNB1P11230 501 aa17.52■□□□□ 0.4
USP39-211ENST00000465282 HOXD9P28356 352 aaPredicted RBP17.52■□□□□ 0.4
USP39-211ENST00000465282 PCK1P35558 622 aa17.52■□□□□ 0.4
USP39-211ENST00000465282 MAGEA1P43355 309 aa17.52■□□□□ 0.4
USP39-211ENST00000465282 TNFRSF4P43489 277 aa17.52■□□□□ 0.4
USP39-211ENST00000465282 DGKGP49619 791 aa17.52■□□□□ 0.4
USP39-211ENST00000465282 ATXN1P54253 815 aaKnown RBP17.52■□□□□ 0.4
USP39-211ENST00000465282 AUHQ13825 339 aaKnown RBP17.52■□□□□ 0.4
USP39-211ENST00000465282 GRAMD4Q6IC98 578 aa17.52■□□□□ 0.4
USP39-211ENST00000465282 SLFN11Q7Z7L1 901 aa17.52■□□□□ 0.4
USP39-211ENST00000465282 PSTKQ8IV42 348 aaKnown RBP17.52■□□□□ 0.4
USP39-211ENST00000465282 CCDC105Q8IYK2 499 aa17.52■□□□□ 0.4
USP39-211ENST00000465282 LGI2Q8N0V4 545 aa17.52■□□□□ 0.4
USP39-211ENST00000465282 TXLNBQ8N3L3 684 aa17.52■□□□□ 0.4
USP39-211ENST00000465282 NAT16Q8N8M0 369 aa17.52■□□□□ 0.4
USP39-211ENST00000465282 CCDC112Q8NEF3 446 aa17.52■□□□□ 0.4
USP39-211ENST00000465282 ZNF564Q8TBZ8 553 aaPredicted RBP17.52■□□□□ 0.4
USP39-211ENST00000465282 KCNV2Q8TDN2 545 aa17.52■□□□□ 0.4
USP39-211ENST00000465282 ARHGEF26Q96DR7 871 aa17.52■□□□□ 0.4
USP39-211ENST00000465282 CALR3Q96L12 384 aaKnown RBP17.52■□□□□ 0.4
USP39-211ENST00000465282 PACSIN1Q9BY11 444 aa17.52■□□□□ 0.4
USP39-211ENST00000465282 SIK2Q9H0K1 926 aa17.52■□□□□ 0.4
USP39-211ENST00000465282 LMAN1LQ9HAT1 526 aa17.52■□□□□ 0.4
USP39-211ENST00000465282 ARHGEF4Q9NR80 690 aa17.52■□□□□ 0.4
USP39-211ENST00000465282 ANAPC7Q9UJX3 599 aa17.52■□□□□ 0.4
USP39-211ENST00000465282 FAM86C2PA6NEL3 165 aa17.51■□□□□ 0.39
USP39-211ENST00000465282 SOWAHDA6NJG2 315 aa17.51■□□□□ 0.39
USP39-211ENST00000465282 TSPAN3O60637 253 aa17.51■□□□□ 0.39
USP39-211ENST00000465282 TBL1XO60907 577 aa17.51■□□□□ 0.39
USP39-211ENST00000465282 KAT7O95251 611 aa17.51■□□□□ 0.39
USP39-211ENST00000465282 CISD3P0C7P0 127 aa17.51■□□□□ 0.39
USP39-211ENST00000465282 ARHGAP25P42331 645 aa17.51■□□□□ 0.39
USP39-211ENST00000465282 SLC6A11P48066 632 aa17.51■□□□□ 0.39
USP39-211ENST00000465282 OXCT1P55809 520 aa17.51■□□□□ 0.39
USP39-211ENST00000465282 ZNF252P-AS1Q0IIN9 211 aa17.51■□□□□ 0.39
USP39-211ENST00000465282 FZD5Q13467 585 aa17.51■□□□□ 0.39
USP39-211ENST00000465282 GSE1Q14687 1217 aa17.51■□□□□ 0.39
USP39-211ENST00000465282 FSTL4Q6MZW2 842 aa17.51■□□□□ 0.39
USP39-211ENST00000465282 FBXL22Q6P050 247 aa17.51■□□□□ 0.39
USP39-211ENST00000465282 SCYL2Q6P3W7 929 aa17.51■□□□□ 0.39
USP39-211ENST00000465282 MAMSTRQ6ZN01 415 aa17.51■□□□□ 0.39
USP39-211ENST00000465282 C12orf40Q86WS4 652 aa17.51■□□□□ 0.39
USP39-211ENST00000465282 TMEM139Q8IV31 216 aa17.51■□□□□ 0.39
USP39-211ENST00000465282 PHTF2Q8N3S3 785 aa17.51■□□□□ 0.39
USP39-211ENST00000465282 TERB1Q8NA31 727 aa17.51■□□□□ 0.39
USP39-211ENST00000465282 FIBINQ8TAL6 211 aa17.51■□□□□ 0.39
USP39-211ENST00000465282 RFFLQ8WZ73 363 aa17.51■□□□□ 0.39
USP39-211ENST00000465282 PRICKLE1Q96MT3 831 aaPredicted RBP17.51■□□□□ 0.39
USP39-211ENST00000465282 FBRSL1Q9HCM7 1045 aaKnown RBP17.51■□□□□ 0.39
USP39-211ENST00000465282 ANLNQ9NQW6 1124 aa17.51■□□□□ 0.39
USP39-211ENST00000465282 PLK2Q9NYY3 685 aa17.51■□□□□ 0.39
USP39-211ENST00000465282 MTF2Q9Y483 593 aaPredicted RBP17.51■□□□□ 0.39
USP39-211ENST00000465282 PCDHA13Q9Y5I0 950 aa17.51■□□□□ 0.39
USP39-211ENST00000465282 KMT2EQ8IZD2 1858 aa17.5■□□□□ 0.39
USP39-211ENST00000465282 IGLV3-10A0A075B6K4 115 aa17.5■□□□□ 0.39
USP39-211ENST00000465282 A0A1B0GVM2 712 aa17.5■□□□□ 0.39
USP39-211ENST00000465282 TCAF2A6NFQ2 919 aa17.5■□□□□ 0.39
USP39-211ENST00000465282 I6L893 689 aaPredicted RBP17.5■□□□□ 0.39
USP39-211ENST00000465282 NRDCO43847 1150 aa17.5■□□□□ 0.39
USP39-211ENST00000465282 PRPSAP2O60256 369 aa17.5■□□□□ 0.39
USP39-211ENST00000465282 AVPR2P30518 371 aa17.5■□□□□ 0.39
USP39-211ENST00000465282 KRT83P78385 493 aa17.5■□□□□ 0.39
USP39-211ENST00000465282 EFHC2Q5JST6 749 aa17.5■□□□□ 0.39
USP39-211ENST00000465282 CHST9Q7L1S5 443 aa17.5■□□□□ 0.39
USP39-211ENST00000465282 SLC35G2Q8TBE7 412 aa17.5■□□□□ 0.39
USP39-211ENST00000465282 BHMTQ93088 406 aa17.5■□□□□ 0.39
USP39-211ENST00000465282 RPRD1AQ96P16 312 aaPredicted RBP17.5■□□□□ 0.39
USP39-211ENST00000465282 PPP1R9BQ96SB3 815 aa17.5■□□□□ 0.39
USP39-211ENST00000465282 LRFN3Q9BTN0 628 aa17.5■□□□□ 0.39
USP39-211ENST00000465282 TRIM7Q9C029 511 aa17.5■□□□□ 0.39
USP39-211ENST00000465282 CHRDQ9H2X0 955 aa17.5■□□□□ 0.39
USP39-211ENST00000465282 DLGAP2Q9P1A6 1054 aa17.5■□□□□ 0.39
USP39-211ENST00000465282 PPARGC1AQ9UBK2 798 aaKnown RBP17.5■□□□□ 0.39
USP39-211ENST00000465282 OR12D3Q9UGF7 316 aa17.5■□□□□ 0.39
USP39-211ENST00000465282 VANGL2Q9ULK5 521 aa17.5■□□□□ 0.39
USP39-211ENST00000465282 STARD13Q9Y3M8 1113 aa17.5■□□□□ 0.39
USP39-211ENST00000465282 A0A0A6YYK5 440 aaPredicted RBP17.49■□□□□ 0.39
USP39-211ENST00000465282 TBC1D3BA6NDS4 549 aa17.49■□□□□ 0.39
USP39-211ENST00000465282 DRGXA6NNA5 263 aa17.49■□□□□ 0.39
USP39-211ENST00000465282 TIMM44O43615 452 aa17.49■□□□□ 0.39
USP39-211ENST00000465282 ATG13O75143 517 aa17.49■□□□□ 0.39
USP39-211ENST00000465282 LRCH4O75427 683 aa17.49■□□□□ 0.39
USP39-211ENST00000465282 CLDN11O75508 207 aa17.49■□□□□ 0.39
USP39-211ENST00000465282 LUC7L3O95232 432 aaKnown RBP17.49■□□□□ 0.39
USP39-211ENST00000465282 L1CAMP32004 1257 aa17.49■□□□□ 0.39
USP39-211ENST00000465282 HTR7P34969 479 aa17.49■□□□□ 0.39
USP39-211ENST00000465282 SGSHP51688 502 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms