RNA–Protein interactions for RNA: ENST00000465155.5

ATF3-208, Transcript of activating transcription factor 3, humanhuman

TSL 2

Gene ATF3, Length 1,626 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-208ENST00000465155 CHSY1Q86X52 802 aa13.84□□□□□ -0.19
ATF3-208ENST00000465155 VSIG1Q86XK7 387 aa13.84□□□□□ -0.19
ATF3-208ENST00000465155 SLC13A5Q86YT5 568 aaPredicted RBP13.84□□□□□ -0.19
ATF3-208ENST00000465155 RFX6Q8HWS3 928 aa13.84□□□□□ -0.19
ATF3-208ENST00000465155 ACTRT1Q8TDG2 376 aa13.84□□□□□ -0.19
ATF3-208ENST00000465155 CSPG4P5Q96PW8 444 aa13.84□□□□□ -0.19
ATF3-208ENST00000465155 PRMT1Q99873 361 aaKnown RBP13.84□□□□□ -0.19
ATF3-208ENST00000465155 HERPUD2Q9BSE4 406 aa13.84□□□□□ -0.19
ATF3-208ENST00000465155 TUBB2BQ9BVA1 445 aa13.84□□□□□ -0.19
ATF3-208ENST00000465155 RCOR3Q9P2K3 495 aaPredicted RBP13.84□□□□□ -0.19
ATF3-208ENST00000465155 CDH7Q9ULB5 785 aa13.84□□□□□ -0.19
ATF3-208ENST00000465155 VANGL2Q9ULK5 521 aa13.84□□□□□ -0.19
ATF3-208ENST00000465155 USP15Q9Y4E8 981 aaPredicted RBP13.84□□□□□ -0.19
ATF3-208ENST00000465155 DOCK8Q8NF50 2099 aa13.84□□□□□ -0.19
ATF3-208ENST00000465155 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.83□□□□□ -0.2
ATF3-208ENST00000465155 E2F8A0AVK6 867 aa13.83□□□□□ -0.2
ATF3-208ENST00000465155 ZNF487B1APH4 448 aa13.83□□□□□ -0.2
ATF3-208ENST00000465155 PGRMC1O00264 195 aaKnown RBP13.83□□□□□ -0.2
ATF3-208ENST00000465155 DAPK3O43293 454 aa13.83□□□□□ -0.2
ATF3-208ENST00000465155 LATS1O95835 1130 aa13.83□□□□□ -0.2
ATF3-208ENST00000465155 TACR2P21452 398 aa13.83□□□□□ -0.2
ATF3-208ENST00000465155 EPHB2P29323 1055 aa13.83□□□□□ -0.2
ATF3-208ENST00000465155 WEE1P30291 646 aa13.83□□□□□ -0.2
ATF3-208ENST00000465155 SLC6A4P31645 630 aa13.83□□□□□ -0.2
ATF3-208ENST00000465155 GBP2P32456 591 aaPredicted RBP13.83□□□□□ -0.2
ATF3-208ENST00000465155 PAFAH1B1P43034 410 aa13.83□□□□□ -0.2
ATF3-208ENST00000465155 ZNF135P52742 658 aaPredicted RBP13.83□□□□□ -0.2
ATF3-208ENST00000465155 NRG1Q02297 640 aaPredicted RBP13.83□□□□□ -0.2
ATF3-208ENST00000465155 ADCY2Q08462 1091 aa13.83□□□□□ -0.2
ATF3-208ENST00000465155 LONRF2Q1L5Z9 754 aa13.83□□□□□ -0.2
ATF3-208ENST00000465155 FAM133BQ5BKY9 247 aaKnown RBP13.83□□□□□ -0.2
ATF3-208ENST00000465155 ACBD5Q5T8D3 534 aaPredicted RBP13.83□□□□□ -0.2
ATF3-208ENST00000465155 MANEALQ5VSG8 457 aa13.83□□□□□ -0.2
ATF3-208ENST00000465155 RWDD4Q6NW29 188 aaKnown RBP13.83□□□□□ -0.2
ATF3-208ENST00000465155 LRRC31Q6UY01 552 aa13.83□□□□□ -0.2
ATF3-208ENST00000465155 RFX8Q6ZV50 586 aa13.83□□□□□ -0.2
ATF3-208ENST00000465155 CELF5Q8N6W0 485 aaKnown RBP13.83□□□□□ -0.2
ATF3-208ENST00000465155 PCDH19Q8TAB3 1148 aa13.83□□□□□ -0.2
ATF3-208ENST00000465155 RIN3Q8TB24 985 aa13.83□□□□□ -0.2
ATF3-208ENST00000465155 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.83□□□□□ -0.2
ATF3-208ENST00000465155 SMARCD2Q92925 531 aa13.83□□□□□ -0.2
ATF3-208ENST00000465155 FAF2Q96CS3 445 aa13.83□□□□□ -0.2
ATF3-208ENST00000465155 ASB16Q96NS5 453 aa13.83□□□□□ -0.2
ATF3-208ENST00000465155 NECTIN4Q96NY8 510 aa13.83□□□□□ -0.2
ATF3-208ENST00000465155 RNF157Q96PX1 679 aa13.83□□□□□ -0.2
ATF3-208ENST00000465155 MYADMQ96S97 322 aa13.83□□□□□ -0.2
ATF3-208ENST00000465155 RNF14Q9UBS8 474 aa13.83□□□□□ -0.2
ATF3-208ENST00000465155 TTC7AQ9ULT0 858 aaPredicted RBP13.83□□□□□ -0.2
ATF3-208ENST00000465155 ZNF510Q9Y2H8 683 aa13.83□□□□□ -0.2
ATF3-208ENST00000465155 DOCK4Q8N1I0 1966 aa13.83□□□□□ -0.2
ATF3-208ENST00000465155 TCRBV7S2A1N4TA0A589 114 aa13.82□□□□□ -0.2
ATF3-208ENST00000465155 F5H5T6 163 aa13.82□□□□□ -0.2
ATF3-208ENST00000465155 TJP3O95049 919 aa13.82□□□□□ -0.2
ATF3-208ENST00000465155 TCF3P15923 654 aa13.82□□□□□ -0.2
ATF3-208ENST00000465155 AMPD1P23109 780 aa13.82□□□□□ -0.2
ATF3-208ENST00000465155 VIPR2P41587 438 aa13.82□□□□□ -0.2
ATF3-208ENST00000465155 HCAR3P49019 387 aa13.82□□□□□ -0.2
ATF3-208ENST00000465155 DYNLT1P63172 113 aa13.82□□□□□ -0.2
ATF3-208ENST00000465155 USP4Q13107 963 aa13.82□□□□□ -0.2
ATF3-208ENST00000465155 ZNF77Q15935 545 aa13.82□□□□□ -0.2
ATF3-208ENST00000465155 WHAMMP3Q1A5X7 153 aa13.82□□□□□ -0.2
ATF3-208ENST00000465155 ADGRF1Q5T601 910 aa13.82□□□□□ -0.2
ATF3-208ENST00000465155 FBXL22Q6P050 247 aa13.82□□□□□ -0.2
ATF3-208ENST00000465155 RFWD3Q6PCD5 774 aa13.82□□□□□ -0.2
ATF3-208ENST00000465155 BBS7Q8IWZ6 715 aa13.82□□□□□ -0.2
ATF3-208ENST00000465155 ZNF683Q8IZ20 524 aa13.82□□□□□ -0.2
ATF3-208ENST00000465155 LGI2Q8N0V4 545 aa13.82□□□□□ -0.2
ATF3-208ENST00000465155 SUSD6Q92537 303 aa13.82□□□□□ -0.2
ATF3-208ENST00000465155 TBC1D31Q96DN5 1066 aa13.82□□□□□ -0.2
ATF3-208ENST00000465155 RPRD1AQ96P16 312 aaPredicted RBP13.82□□□□□ -0.2
ATF3-208ENST00000465155 NAP1L3Q99457 506 aaPredicted RBP13.82□□□□□ -0.2
ATF3-208ENST00000465155 DDX50Q9BQ39 737 aaKnown RBP13.82□□□□□ -0.2
ATF3-208ENST00000465155 KIF9Q9HAQ2 790 aa13.82□□□□□ -0.2
ATF3-208ENST00000465155 ARHGEF4Q9NR80 690 aa13.82□□□□□ -0.2
ATF3-208ENST00000465155 STIM2Q9P246 746 aa13.82□□□□□ -0.2
ATF3-208ENST00000465155 STOML2Q9UJZ1 356 aa13.82□□□□□ -0.2
ATF3-208ENST00000465155 NEU3Q9UQ49 428 aa13.82□□□□□ -0.2
ATF3-208ENST00000465155 EFR3BQ9Y2G0 817 aa13.82□□□□□ -0.2
ATF3-208ENST00000465155 BRWD1Q9NSI6 2320 aa13.82□□□□□ -0.2
ATF3-208ENST00000465155 GRXCR2A6NFK2 248 aa13.82□□□□□ -0.2
ATF3-208ENST00000465155 PDE2AO00408 941 aaPredicted RBP13.82□□□□□ -0.2
ATF3-208ENST00000465155 TRDMT1O14717 391 aaKnown RBP13.82□□□□□ -0.2
ATF3-208ENST00000465155 CST8O60676 142 aa13.82□□□□□ -0.2
ATF3-208ENST00000465155 HTR7P34969 479 aa13.82□□□□□ -0.2
ATF3-208ENST00000465155 DPYSQ14117 519 aa13.82□□□□□ -0.2
ATF3-208ENST00000465155 TFDP2Q14188 446 aa13.82□□□□□ -0.2
ATF3-208ENST00000465155 ARTNQ5T4W7 220 aa13.82□□□□□ -0.2
ATF3-208ENST00000465155 PQLC3Q8N755 202 aa13.82□□□□□ -0.2
ATF3-208ENST00000465155 ST13P5Q8NFI4 369 aaPredicted RBP13.82□□□□□ -0.2
ATF3-208ENST00000465155 HLA-CQ95604 372 aa13.82□□□□□ -0.2
ATF3-208ENST00000465155 IGSF8Q969P0 613 aa13.82□□□□□ -0.2
ATF3-208ENST00000465155 MYEOVQ96EZ4 313 aa13.82□□□□□ -0.2
ATF3-208ENST00000465155 MPP6Q9NZW5 540 aa13.82□□□□□ -0.2
ATF3-208ENST00000465155 APOL1O14791 398 aa13.81□□□□□ -0.2
ATF3-208ENST00000465155 TSPAN3O60637 253 aa13.81□□□□□ -0.2
ATF3-208ENST00000465155 ERCC2P18074 760 aa13.81□□□□□ -0.2
ATF3-208ENST00000465155 HOXC13P31276 330 aa13.81□□□□□ -0.2
ATF3-208ENST00000465155 IRAK1P51617 712 aa13.81□□□□□ -0.2
ATF3-208ENST00000465155 VCPP55072 806 aaKnown RBP13.81□□□□□ -0.2
ATF3-208ENST00000465155 CKAP4Q07065 602 aaKnown RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms