RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 ATXN1P54253 815 aaKnown RBP9.29□□□□□ -0.92
HPS4-208ENST00000464362 OCA2Q04671 838 aa9.29□□□□□ -0.92
HPS4-208ENST00000464362 EFEMP1Q12805 493 aa9.29□□□□□ -0.92
HPS4-208ENST00000464362 VGLL4Q14135 290 aa9.29□□□□□ -0.92
HPS4-208ENST00000464362 PRAMEF19Q5SWL8 479 aa9.29□□□□□ -0.92
HPS4-208ENST00000464362 RFWD3Q6PCD5 774 aa9.29□□□□□ -0.92
HPS4-208ENST00000464362 C12orf56Q8IXR9 622 aa9.29□□□□□ -0.92
HPS4-208ENST00000464362 RBM15BQ8NDT2 890 aaKnown RBP9.29□□□□□ -0.92
HPS4-208ENST00000464362 GRIP2Q9C0E4 1043 aa9.29□□□□□ -0.92
HPS4-208ENST00000464362 MCM8Q9UJA3 840 aa9.29□□□□□ -0.92
HPS4-208ENST00000464362 H0YGN5 161 aa9.29□□□□□ -0.92
HPS4-208ENST00000464362 GSC2O15499 205 aa9.29□□□□□ -0.92
HPS4-208ENST00000464362 TMEM63AO94886 807 aa9.29□□□□□ -0.92
HPS4-208ENST00000464362 ABHD2P08910 425 aa9.29□□□□□ -0.92
HPS4-208ENST00000464362 CTBP1Q13363 440 aa9.29□□□□□ -0.92
HPS4-208ENST00000464362 LACTB2Q53H82 288 aaPredicted RBP9.29□□□□□ -0.92
HPS4-208ENST00000464362 LPCAT4Q643R3 524 aa9.29□□□□□ -0.92
HPS4-208ENST00000464362 TRMT10BQ6PF06 316 aaKnown RBP9.29□□□□□ -0.92
HPS4-208ENST00000464362 PIGWQ7Z7B1 504 aa9.29□□□□□ -0.92
HPS4-208ENST00000464362 TTC30BQ8N4P2 665 aa9.29□□□□□ -0.92
HPS4-208ENST00000464362 ZNF317Q96PQ6 595 aaPredicted RBP9.29□□□□□ -0.92
HPS4-208ENST00000464362 GAD1Q99259 594 aa9.29□□□□□ -0.92
HPS4-208ENST00000464362 TBCBQ99426 244 aa9.29□□□□□ -0.92
HPS4-208ENST00000464362 THUMPD3Q9BV44 507 aaKnown RBP9.29□□□□□ -0.92
HPS4-208ENST00000464362 TRPC7Q9HCX4 862 aa9.29□□□□□ -0.92
HPS4-208ENST00000464362 HPS4Q9NQG7 708 aa9.29□□□□□ -0.92
HPS4-208ENST00000464362 GPRC5DQ9NZD1 345 aa9.29□□□□□ -0.92
HPS4-208ENST00000464362 SLC17A6Q9P2U8 582 aa9.29□□□□□ -0.92
HPS4-208ENST00000464362 NFS1Q9Y697 457 aa9.29□□□□□ -0.92
HPS4-208ENST00000464362 TCRBV7S3A2A0A539 114 aa9.28□□□□□ -0.92
HPS4-208ENST00000464362 PIRTP0C851 137 aa9.28□□□□□ -0.92
HPS4-208ENST00000464362 RABGGTBP53611 331 aa9.28□□□□□ -0.92
HPS4-208ENST00000464362 DDX39BQ13838 428 aaKnown RBP9.28□□□□□ -0.92
HPS4-208ENST00000464362 AGAP9Q5VTM2 703 aa9.28□□□□□ -0.92
HPS4-208ENST00000464362 WSCD1Q658N2 575 aa9.28□□□□□ -0.92
HPS4-208ENST00000464362 ABHD15Q6UXT9 468 aa9.28□□□□□ -0.92
HPS4-208ENST00000464362 C4orf22Q6V702 233 aa9.28□□□□□ -0.92
HPS4-208ENST00000464362 C10orf107Q8IVU9 208 aa9.28□□□□□ -0.92
HPS4-208ENST00000464362 OR6Y1Q8NGX8 325 aa9.28□□□□□ -0.92
HPS4-208ENST00000464362 CLEC4DQ8WXI8 215 aa9.28□□□□□ -0.92
HPS4-208ENST00000464362 TSPAN17Q96FV3 270 aa9.28□□□□□ -0.92
HPS4-208ENST00000464362 SYT15Q9BQS2 421 aa9.28□□□□□ -0.92
HPS4-208ENST00000464362 KCNK4Q9NYG8 393 aa9.28□□□□□ -0.92
HPS4-208ENST00000464362 ARHGAP28Q9P2N2 729 aa9.28□□□□□ -0.92
HPS4-208ENST00000464362 CPA4Q9UI42 421 aa9.28□□□□□ -0.92
HPS4-208ENST00000464362 UBDO15205 165 aa9.28□□□□□ -0.92
HPS4-208ENST00000464362 MTSS1O43312 755 aa9.28□□□□□ -0.92
HPS4-208ENST00000464362 UGT1A9O60656 530 aa9.28□□□□□ -0.92
HPS4-208ENST00000464362 ANXA9O76027 345 aa9.28□□□□□ -0.92
HPS4-208ENST00000464362 LGALS2P05162 132 aa9.28□□□□□ -0.92
HPS4-208ENST00000464362 ARF4P18085 180 aaPredicted RBP9.28□□□□□ -0.92
HPS4-208ENST00000464362 ATICP31939 592 aa9.28□□□□□ -0.92
HPS4-208ENST00000464362 THPOP40225 353 aa9.28□□□□□ -0.92
HPS4-208ENST00000464362 MPP2Q14168 576 aa9.28□□□□□ -0.92
HPS4-208ENST00000464362 ACAP1Q15027 740 aa9.28□□□□□ -0.92
HPS4-208ENST00000464362 ULK2Q8IYT8 1036 aa9.28□□□□□ -0.92
HPS4-208ENST00000464362 PPP2R3CQ969Q6 453 aa9.28□□□□□ -0.92
HPS4-208ENST00000464362 C18orf25Q96B23 403 aaPredicted RBP9.28□□□□□ -0.92
HPS4-208ENST00000464362 OPTNQ96CV9 577 aa9.28□□□□□ -0.92
HPS4-208ENST00000464362 NDNQ99608 321 aa9.28□□□□□ -0.92
HPS4-208ENST00000464362 EBNA1BP2Q99848 306 aaKnown RBP9.28□□□□□ -0.92
HPS4-208ENST00000464362 CATSPERBQ9H7T0 1116 aa9.28□□□□□ -0.92
HPS4-208ENST00000464362 UGT1A7Q9HAW7 530 aa9.28□□□□□ -0.92
HPS4-208ENST00000464362 UGT1A10Q9HAW8 530 aa9.28□□□□□ -0.92
HPS4-208ENST00000464362 UGT1A8Q9HAW9 530 aa9.28□□□□□ -0.92
HPS4-208ENST00000464362 PKD2L2Q9NZM6 624 aa9.28□□□□□ -0.92
HPS4-208ENST00000464362 PKP3Q9Y446 797 aa9.28□□□□□ -0.92
HPS4-208ENST00000464362 SLC30A1Q9Y6M5 507 aa9.28□□□□□ -0.92
HPS4-208ENST00000464362 WASF2Q9Y6W5 498 aa9.28□□□□□ -0.92
HPS4-208ENST00000464362 MYPNQ86TC9 1320 aa9.28□□□□□ -0.92
HPS4-208ENST00000464362 CNTNAP2Q9UHC6 1331 aa9.28□□□□□ -0.92
HPS4-208ENST00000464362 SPATA31C2B4DYI2 1134 aa9.28□□□□□ -0.92
HPS4-208ENST00000464362 HNRNPLP14866 589 aaKnown RBP eCLIP9.28□□□□□ -0.92
HPS4-208ENST00000464362 ITGB6P18564 788 aa9.28□□□□□ -0.92
HPS4-208ENST00000464362 BDNFP23560 247 aa9.28□□□□□ -0.92
HPS4-208ENST00000464362 GTF2H3Q13889 308 aa9.28□□□□□ -0.92
HPS4-208ENST00000464362 RNASEH2BQ5TBB1 312 aaKnown RBP9.28□□□□□ -0.92
HPS4-208ENST00000464362 IRGCQ6NXR0 463 aa9.28□□□□□ -0.92
HPS4-208ENST00000464362 CCDC81Q6ZN84 652 aa9.28□□□□□ -0.92
HPS4-208ENST00000464362 ILDR2Q71H61 639 aa9.28□□□□□ -0.92
HPS4-208ENST00000464362 SETD3Q86TU7 594 aaPredicted RBP9.28□□□□□ -0.92
HPS4-208ENST00000464362 LPIN3Q9BQK8 851 aa9.28□□□□□ -0.92
HPS4-208ENST00000464362 TMEM79Q9BSE2 394 aa9.28□□□□□ -0.92
HPS4-208ENST00000464362 MRIQ9BWK5 157 aa9.28□□□□□ -0.92
HPS4-208ENST00000464362 PHACTR1Q9C0D0 580 aa9.28□□□□□ -0.92
HPS4-208ENST00000464362 TKTL2Q9H0I9 626 aa9.28□□□□□ -0.92
HPS4-208ENST00000464362 PCDH18Q9HCL0 1135 aa9.28□□□□□ -0.92
HPS4-208ENST00000464362 CHCHD3Q9NX63 227 aaKnown RBP9.28□□□□□ -0.92
HPS4-208ENST00000464362 ITGA11Q9UKX5 1188 aa9.28□□□□□ -0.92
HPS4-208ENST00000464362 MGRN1O60291 552 aa9.28□□□□□ -0.92
HPS4-208ENST00000464362 MAFO75444 373 aaPredicted RBP9.28□□□□□ -0.92
HPS4-208ENST00000464362 DDHD2O94830 711 aa9.28□□□□□ -0.92
HPS4-208ENST00000464362 EGFRP00533 1210 aa9.28□□□□□ -0.92
HPS4-208ENST00000464362 UNGP13051 313 aaPredicted RBP9.28□□□□□ -0.92
HPS4-208ENST00000464362 ARHGDIAP52565 204 aa9.28□□□□□ -0.92
HPS4-208ENST00000464362 HDAC4P56524 1084 aa9.28□□□□□ -0.92
HPS4-208ENST00000464362 KCNK10P57789 538 aa9.28□□□□□ -0.92
HPS4-208ENST00000464362 BEX3Q00994 111 aa9.28□□□□□ -0.92
HPS4-208ENST00000464362 TBCCQ15814 346 aa9.28□□□□□ -0.92
HPS4-208ENST00000464362 CATSPERGQ6ZRH7 1159 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms