RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 NDUFAF2Q8N183 169 aa7.4□□□□□ -1.22
CLSTN1-204ENST00000464286 ZBTB8BQ8NAP8 495 aaPredicted RBP7.4□□□□□ -1.22
CLSTN1-204ENST00000464286 SLC4A11Q8NBS3 891 aa7.4□□□□□ -1.22
CLSTN1-204ENST00000464286 PHC3Q8NDX5 983 aa7.4□□□□□ -1.22
CLSTN1-204ENST00000464286 TNIP2Q8NFZ5 429 aa7.4□□□□□ -1.22
CLSTN1-204ENST00000464286 HM13Q8TCT9 377 aa7.4□□□□□ -1.22
CLSTN1-204ENST00000464286 ZNF606Q8WXB4 792 aa7.4□□□□□ -1.22
CLSTN1-204ENST00000464286 NMD3Q96D46 503 aaKnown RBP7.4□□□□□ -1.22
CLSTN1-204ENST00000464286 RTP4Q96DX8 246 aa7.4□□□□□ -1.22
CLSTN1-204ENST00000464286 DCUN1D1Q96GG9 259 aa7.4□□□□□ -1.22
CLSTN1-204ENST00000464286 SERAC1Q96JX3 654 aa7.4□□□□□ -1.22
CLSTN1-204ENST00000464286 MCEEQ96PE7 176 aa7.4□□□□□ -1.22
CLSTN1-204ENST00000464286 P2RX7Q99572 595 aaKnown RBP7.4□□□□□ -1.22
CLSTN1-204ENST00000464286 FAM213AQ9BRX8 229 aa7.4□□□□□ -1.22
CLSTN1-204ENST00000464286 DNAI2Q9GZS0 605 aa7.4□□□□□ -1.22
CLSTN1-204ENST00000464286 LHX5Q9H2C1 402 aa7.4□□□□□ -1.22
CLSTN1-204ENST00000464286 PREBQ9HCU5 417 aa7.4□□□□□ -1.22
CLSTN1-204ENST00000464286 PALMDQ9NP74 551 aa7.4□□□□□ -1.22
CLSTN1-204ENST00000464286 KCNH7Q9NS40 1196 aa7.4□□□□□ -1.22
CLSTN1-204ENST00000464286 TBC1D23Q9NUY8 699 aa7.4□□□□□ -1.22
CLSTN1-204ENST00000464286 TXNDC16Q9P2K2 825 aa7.4□□□□□ -1.22
CLSTN1-204ENST00000464286 VTI1BQ9UEU0 232 aa7.4□□□□□ -1.22
CLSTN1-204ENST00000464286 RSL24D1Q9UHA3 163 aaKnown RBP7.4□□□□□ -1.22
CLSTN1-204ENST00000464286 SERPINA10Q9UK55 444 aa7.4□□□□□ -1.22
CLSTN1-204ENST00000464286 ADAM28Q9UKQ2 775 aa7.4□□□□□ -1.22
CLSTN1-204ENST00000464286 AGO2Q9UKV8 859 aaKnown RBP7.4□□□□□ -1.22
CLSTN1-204ENST00000464286 POMPQ9Y244 141 aa7.4□□□□□ -1.22
CLSTN1-204ENST00000464286 LZTS1Q9Y250 596 aa7.4□□□□□ -1.22
CLSTN1-204ENST00000464286 TMX2Q9Y320 296 aa7.4□□□□□ -1.22
CLSTN1-204ENST00000464286 AP4S1Q9Y587 144 aa7.4□□□□□ -1.22
CLSTN1-204ENST00000464286 UBIAD1Q9Y5Z9 338 aa7.4□□□□□ -1.22
CLSTN1-204ENST00000464286 STYXL1Q9Y6J8 313 aa7.4□□□□□ -1.22
CLSTN1-204ENST00000464286 LTBP1Q14766 1721 aa7.4□□□□□ -1.23
CLSTN1-204ENST00000464286 H7C0C1 242 aa7.39□□□□□ -1.23
CLSTN1-204ENST00000464286 HNRNPRO43390 633 aaKnown RBP7.39□□□□□ -1.23
CLSTN1-204ENST00000464286 ADCY3O60266 1144 aa7.39□□□□□ -1.23
CLSTN1-204ENST00000464286 NOL3O60936 208 aaKnown RBP7.39□□□□□ -1.23
CLSTN1-204ENST00000464286 SIN3BO75182 1162 aa7.39□□□□□ -1.23
CLSTN1-204ENST00000464286 TOM1L1O75674 476 aa7.39□□□□□ -1.23
CLSTN1-204ENST00000464286 PDE5AO76074 875 aa7.39□□□□□ -1.23
CLSTN1-204ENST00000464286 ZBED1O96006 694 aa7.39□□□□□ -1.23
CLSTN1-204ENST00000464286 ICAM1P05362 532 aa7.39□□□□□ -1.23
CLSTN1-204ENST00000464286 PSAPP07602 524 aa7.39□□□□□ -1.23
CLSTN1-204ENST00000464286 FGFR1P11362 822 aa7.39□□□□□ -1.23
CLSTN1-204ENST00000464286 ETS1P14921 441 aa7.39□□□□□ -1.23
CLSTN1-204ENST00000464286 ZNF12P17014 697 aa7.39□□□□□ -1.23
CLSTN1-204ENST00000464286 ZNF23P17027 643 aa7.39□□□□□ -1.23
CLSTN1-204ENST00000464286 DNAJB1P25685 340 aa7.39□□□□□ -1.23
CLSTN1-204ENST00000464286 PMLP29590 882 aa7.39□□□□□ -1.23
CLSTN1-204ENST00000464286 ALDH1B1P30837 517 aa7.39□□□□□ -1.23
CLSTN1-204ENST00000464286 L1CAMP32004 1257 aa7.39□□□□□ -1.23
CLSTN1-204ENST00000464286 ATP5OP48047 213 aa7.39□□□□□ -1.23
CLSTN1-204ENST00000464286 CPA2P48052 419 aa7.39□□□□□ -1.23
CLSTN1-204ENST00000464286 SLC1A6P48664 564 aa7.39□□□□□ -1.23
CLSTN1-204ENST00000464286 DGKGP49619 791 aa7.39□□□□□ -1.23
CLSTN1-204ENST00000464286 CDK9P50750 372 aaKnown RBP7.39□□□□□ -1.23
CLSTN1-204ENST00000464286 EPHB1P54762 984 aa7.39□□□□□ -1.23
CLSTN1-204ENST00000464286 AQP4P55087 323 aa7.39□□□□□ -1.23
CLSTN1-204ENST00000464286 PDE1BQ01064 536 aa7.39□□□□□ -1.23
CLSTN1-204ENST00000464286 PPIDQ08752 370 aaKnown RBP7.39□□□□□ -1.23
CLSTN1-204ENST00000464286 TBL3Q12788 808 aaKnown RBP7.39□□□□□ -1.23
CLSTN1-204ENST00000464286 PPIL2Q13356 520 aa7.39□□□□□ -1.23
CLSTN1-204ENST00000464286 SNAPC2Q13487 334 aa7.39□□□□□ -1.23
CLSTN1-204ENST00000464286 CCNIQ14094 377 aa7.39□□□□□ -1.23
CLSTN1-204ENST00000464286 LPIN1Q14693 890 aa7.39□□□□□ -1.23
CLSTN1-204ENST00000464286 NOMO1Q15155 1222 aa7.39□□□□□ -1.23
CLSTN1-204ENST00000464286 PDCD4Q53EL6 469 aaKnown RBP7.39□□□□□ -1.23
CLSTN1-204ENST00000464286 CCDC92Q53HC0 331 aaPredicted RBP7.39□□□□□ -1.23
CLSTN1-204ENST00000464286 FASTKD1Q53R41 847 aaKnown RBP7.39□□□□□ -1.23
CLSTN1-204ENST00000464286 BOLA3Q53S33 107 aa7.39□□□□□ -1.23
CLSTN1-204ENST00000464286 SFT2D3Q587I9 215 aa7.39□□□□□ -1.23
CLSTN1-204ENST00000464286 HP1BP3Q5SSJ5 553 aaPredicted RBP7.39□□□□□ -1.23
CLSTN1-204ENST00000464286 IRAK1BP1Q5VVH5 260 aa7.39□□□□□ -1.23
CLSTN1-204ENST00000464286 PDPK2PQ6A1A2 396 aa7.39□□□□□ -1.23
CLSTN1-204ENST00000464286 PRR5LQ6MZQ0 368 aa7.39□□□□□ -1.23
CLSTN1-204ENST00000464286 APOBEC3HQ6NTF7 200 aaKnown RBP7.39□□□□□ -1.23
CLSTN1-204ENST00000464286 KLHDC10Q6PID8 442 aa7.39□□□□□ -1.23
CLSTN1-204ENST00000464286 PACS1Q6VY07 963 aa7.39□□□□□ -1.23
CLSTN1-204ENST00000464286 BNC2Q6ZN30 1099 aaPredicted RBP7.39□□□□□ -1.23
CLSTN1-204ENST00000464286 TTC7BQ86TV6 843 aa7.39□□□□□ -1.23
CLSTN1-204ENST00000464286 SATL1Q86VE3 508 aa7.39□□□□□ -1.23
CLSTN1-204ENST00000464286 WDR49Q8IV35 697 aa7.39□□□□□ -1.23
CLSTN1-204ENST00000464286 EXOC8Q8IYI6 725 aa7.39□□□□□ -1.23
CLSTN1-204ENST00000464286 AFAP1L2Q8N4X5 818 aa7.39□□□□□ -1.23
CLSTN1-204ENST00000464286 TRIML2Q8N7C3 387 aa7.39□□□□□ -1.23
CLSTN1-204ENST00000464286 KYQ8NBH2 561 aa7.39□□□□□ -1.23
CLSTN1-204ENST00000464286 GSTCDQ8NEC7 633 aa7.39□□□□□ -1.23
CLSTN1-204ENST00000464286 CMASQ8NFW8 434 aaPredicted RBP7.39□□□□□ -1.23
CLSTN1-204ENST00000464286 RP9Q8TA86 221 aaKnown RBP7.39□□□□□ -1.23
CLSTN1-204ENST00000464286 RDH11Q8TC12 318 aa7.39□□□□□ -1.23
CLSTN1-204ENST00000464286 SPATA18Q8TC71 538 aa7.39□□□□□ -1.23
CLSTN1-204ENST00000464286 DEPDC1BQ8WUY9 529 aa7.39□□□□□ -1.23
CLSTN1-204ENST00000464286 USP6NLQ92738 828 aa7.39□□□□□ -1.23
CLSTN1-204ENST00000464286 CFAP36Q96G28 342 aa7.39□□□□□ -1.23
CLSTN1-204ENST00000464286 TSNARE1Q96NA8 513 aa7.39□□□□□ -1.23
CLSTN1-204ENST00000464286 CSRNP1Q96S65 589 aa7.39□□□□□ -1.23
CLSTN1-204ENST00000464286 TBCBQ99426 244 aa7.39□□□□□ -1.23
CLSTN1-204ENST00000464286 DDX50Q9BQ39 737 aaKnown RBP7.39□□□□□ -1.23
CLSTN1-204ENST00000464286 TRIM56Q9BRZ2 755 aaKnown RBP7.39□□□□□ -1.23
CLSTN1-204ENST00000464286 OSBPL11Q9BXB4 747 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms