RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 MOCS2O96007 188 aaPredicted RBP19.56■□□□□ 0.72
SF3A1-205ENST00000463818 IGLV3-19P01714 112 aa19.56■□□□□ 0.72
SF3A1-205ENST00000463818 SYPP08247 313 aa19.56■□□□□ 0.72
SF3A1-205ENST00000463818 GNSP15586 552 aa19.56■□□□□ 0.72
SF3A1-205ENST00000463818 PON1P27169 355 aa19.56■□□□□ 0.72
SF3A1-205ENST00000463818 RPS24P62847 133 aaKnown RBP19.56■□□□□ 0.72
SF3A1-205ENST00000463818 YWHAZP63104 245 aaKnown RBP19.56■□□□□ 0.72
SF3A1-205ENST00000463818 TAF5Q15542 800 aa19.56■□□□□ 0.72
SF3A1-205ENST00000463818 TPD52L1Q16890 204 aaPredicted RBP19.56■□□□□ 0.72
SF3A1-205ENST00000463818 ZC3H12AQ5D1E8 599 aaKnown RBP19.56■□□□□ 0.72
SF3A1-205ENST00000463818 MS4A13Q5J8X5 152 aa19.56■□□□□ 0.72
SF3A1-205ENST00000463818 FAM124AQ86V42 546 aa19.56■□□□□ 0.72
SF3A1-205ENST00000463818 WDTC1Q8N5D0 677 aa19.56■□□□□ 0.72
SF3A1-205ENST00000463818 MINDY1Q8N5J2 469 aa19.56■□□□□ 0.72
SF3A1-205ENST00000463818 ZNF557Q8N988 423 aaPredicted RBP19.56■□□□□ 0.72
SF3A1-205ENST00000463818 OR2I1PQ8NGU4 316 aa19.56■□□□□ 0.72
SF3A1-205ENST00000463818 DNASE2BQ8WZ79 361 aa19.56■□□□□ 0.72
SF3A1-205ENST00000463818 TTC17Q96AE7 1141 aa19.56■□□□□ 0.72
SF3A1-205ENST00000463818 PRICKLE1Q96MT3 831 aaPredicted RBP19.56■□□□□ 0.72
SF3A1-205ENST00000463818 TRIM62Q9BVG3 475 aa19.56■□□□□ 0.72
SF3A1-205ENST00000463818 NUCKS1Q9H1E3 243 aaKnown RBP19.56■□□□□ 0.72
SF3A1-205ENST00000463818 SLC32A1Q9H598 525 aa19.56■□□□□ 0.72
SF3A1-205ENST00000463818 THAP9Q9H5L6 903 aa19.56■□□□□ 0.72
SF3A1-205ENST00000463818 POPDC2Q9HBU9 364 aa19.56■□□□□ 0.72
SF3A1-205ENST00000463818 PRSS16Q9NQE7 514 aa19.56■□□□□ 0.72
SF3A1-205ENST00000463818 SUN2Q9UH99 717 aa19.56■□□□□ 0.72
SF3A1-205ENST00000463818 PLXND1Q9Y4D7 1925 aa19.56■□□□□ 0.72
SF3A1-205ENST00000463818 GTPBP10A4D1E9 387 aaKnown RBP19.55■□□□□ 0.72
SF3A1-205ENST00000463818 METTL12A8MUP2 240 aa19.55■□□□□ 0.72
SF3A1-205ENST00000463818 MEI4A8MW99 385 aa19.55■□□□□ 0.72
SF3A1-205ENST00000463818 TRUB2O95900 331 aaKnown RBP19.55■□□□□ 0.72
SF3A1-205ENST00000463818 SEMA3BQ13214 749 aa19.55■□□□□ 0.72
SF3A1-205ENST00000463818 PDCLQ13371 301 aa19.55■□□□□ 0.72
SF3A1-205ENST00000463818 DCAF6Q58WW2 860 aa19.55■□□□□ 0.72
SF3A1-205ENST00000463818 PIP4P1Q86T03 277 aa19.55■□□□□ 0.72
SF3A1-205ENST00000463818 CFAP52Q8N1V2 620 aa19.55■□□□□ 0.72
SF3A1-205ENST00000463818 CARNMT1Q8N4J0 409 aa19.55■□□□□ 0.72
SF3A1-205ENST00000463818 SHC3Q92529 594 aa19.55■□□□□ 0.72
SF3A1-205ENST00000463818 LHX5Q9H2C1 402 aa19.55■□□□□ 0.72
SF3A1-205ENST00000463818 CLSTN2Q9H4D0 955 aa19.55■□□□□ 0.72
SF3A1-205ENST00000463818 TJP2Q9UDY2 1190 aa19.55■□□□□ 0.72
SF3A1-205ENST00000463818 XPO7Q9UIA9 1087 aaKnown RBP19.55■□□□□ 0.72
SF3A1-205ENST00000463818 NFE2L3Q9Y4A8 694 aa19.55■□□□□ 0.72
SF3A1-205ENST00000463818 TYW5A2RUC4 315 aaKnown RBP19.54■□□□□ 0.72
SF3A1-205ENST00000463818 UPK3BL1B0FP48 263 aa19.54■□□□□ 0.72
SF3A1-205ENST00000463818 UPK3BL2E5RIL1 263 aa19.54■□□□□ 0.72
SF3A1-205ENST00000463818 APOEP02649 317 aa19.54■□□□□ 0.72
SF3A1-205ENST00000463818 PITX1P78337 314 aaPredicted RBP19.54■□□□□ 0.72
SF3A1-205ENST00000463818 DCAF12L1Q5VU92 463 aa19.54■□□□□ 0.72
SF3A1-205ENST00000463818 CCDC117Q8IWD4 279 aaPredicted RBP19.54■□□□□ 0.72
SF3A1-205ENST00000463818 LGI2Q8N0V4 545 aa19.54■□□□□ 0.72
SF3A1-205ENST00000463818 MIR1-1HGQ9H1L0 117 aa19.54■□□□□ 0.72
SF3A1-205ENST00000463818 SIX2Q9NPC8 291 aa19.54■□□□□ 0.72
SF3A1-205ENST00000463818 DNAJC12Q9UKB3 198 aa19.54■□□□□ 0.72
SF3A1-205ENST00000463818 INTS6Q9UL03 887 aaKnown RBP19.54■□□□□ 0.72
SF3A1-205ENST00000463818 PI4KAP42356 2102 aa19.54■□□□□ 0.72
SF3A1-205ENST00000463818 A0A1B0GTW7 788 aa19.53■□□□□ 0.72
SF3A1-205ENST00000463818 FOXN3O00409 490 aaPredicted RBP19.53■□□□□ 0.72
SF3A1-205ENST00000463818 C7P10643 843 aa19.53■□□□□ 0.72
SF3A1-205ENST00000463818 CSKP41240 450 aa19.53■□□□□ 0.72
SF3A1-205ENST00000463818 RPS14P62263 151 aaKnown RBP19.53■□□□□ 0.72
SF3A1-205ENST00000463818 PTK2Q05397 1052 aa19.53■□□□□ 0.72
SF3A1-205ENST00000463818 FOXC1Q12948 553 aa19.53■□□□□ 0.72
SF3A1-205ENST00000463818 FSCBQ5H9T9 825 aa19.53■□□□□ 0.72
SF3A1-205ENST00000463818 MMS22LQ6ZRQ5 1243 aa19.53■□□□□ 0.72
SF3A1-205ENST00000463818 PASD1Q8IV76 773 aa19.53■□□□□ 0.72
SF3A1-205ENST00000463818 PPP1R13BQ96KQ4 1090 aa19.53■□□□□ 0.72
SF3A1-205ENST00000463818 CPXM1Q96SM3 734 aa19.53■□□□□ 0.72
SF3A1-205ENST00000463818 MTG2Q9H4K7 406 aa19.53■□□□□ 0.72
SF3A1-205ENST00000463818 FBRSQ9HAH7 460 aa19.53■□□□□ 0.72
SF3A1-205ENST00000463818 DNAAF2Q9NVR5 837 aaKnown RBP19.53■□□□□ 0.72
SF3A1-205ENST00000463818 SLC12A6Q9UHW9 1150 aa19.53■□□□□ 0.72
SF3A1-205ENST00000463818 AJAP1Q9UKB5 411 aaPredicted RBP19.53■□□□□ 0.72
SF3A1-205ENST00000463818 PCDHGC3Q9UN70 934 aa19.53■□□□□ 0.72
SF3A1-205ENST00000463818 ASCC3Q8N3C0 2202 aaKnown RBP19.53■□□□□ 0.72
SF3A1-205ENST00000463818 EPG5Q9HCE0 2579 aa19.53■□□□□ 0.72
SF3A1-205ENST00000463818 H0Y626 953 aa19.52■□□□□ 0.72
SF3A1-205ENST00000463818 IGLV3-25P01717 112 aa19.52■□□□□ 0.72
SF3A1-205ENST00000463818 ASLP04424 464 aa19.52■□□□□ 0.72
SF3A1-205ENST00000463818 CD59P13987 128 aa19.52■□□□□ 0.72
SF3A1-205ENST00000463818 TACR2P21452 398 aa19.52■□□□□ 0.72
SF3A1-205ENST00000463818 ACSL1P33121 698 aa19.52■□□□□ 0.72
SF3A1-205ENST00000463818 ST8SIA6P61647 398 aa19.52■□□□□ 0.72
SF3A1-205ENST00000463818 CDK17Q00537 523 aa19.52■□□□□ 0.72
SF3A1-205ENST00000463818 EIF4EBP2Q13542 120 aaPredicted RBP19.52■□□□□ 0.72
SF3A1-205ENST00000463818 CDH18Q13634 790 aa19.52■□□□□ 0.72
SF3A1-205ENST00000463818 MAN2A1Q16706 1144 aa19.52■□□□□ 0.72
SF3A1-205ENST00000463818 RAP1GAP2Q684P5 730 aa19.52■□□□□ 0.72
SF3A1-205ENST00000463818 CHSY1Q86X52 802 aa19.52■□□□□ 0.72
SF3A1-205ENST00000463818 DEFB106AQ8N104 65 aa19.52■□□□□ 0.72
SF3A1-205ENST00000463818 ZCCHC9Q8N567 271 aaKnown RBP19.52■□□□□ 0.72
SF3A1-205ENST00000463818 ATP6V0D2Q8N8Y2 350 aa19.52■□□□□ 0.72
SF3A1-205ENST00000463818 MYO19Q96H55 970 aa19.52■□□□□ 0.72
SF3A1-205ENST00000463818 BTN2A3PQ96KV6 586 aa19.52■□□□□ 0.72
SF3A1-205ENST00000463818 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.52■□□□□ 0.72
SF3A1-205ENST00000463818 KIAA1522Q9P206 1035 aaPredicted RBP19.52■□□□□ 0.72
SF3A1-205ENST00000463818 EIF2B4Q9UI10 523 aaKnown RBP19.52■□□□□ 0.72
SF3A1-205ENST00000463818 TNRC6BQ9UPQ9 1833 aaKnown RBP19.52■□□□□ 0.72
SF3A1-205ENST00000463818 LUC7L3O95232 432 aaKnown RBP19.51■□□□□ 0.71
SF3A1-205ENST00000463818 TOP3BO95985 862 aaKnown RBP19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms