RNA–Protein interactions for RNA: ENST00000463407.5

NUP58-206, Transcript of nucleoporin 58, humanhuman

TSL 1 (best) BASIC

Gene NUP58, Length 6,360 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-206ENST00000463407 GPR152Q8TDT2 470 aa13.12□□□□□ -0.31
NUP58-206ENST00000463407 BTN2A2Q8WVV5 523 aa13.12□□□□□ -0.31
NUP58-206ENST00000463407 CDC42EP4Q9H3Q1 356 aaKnown RBP13.12□□□□□ -0.31
NUP58-206ENST00000463407 CERS4Q9HA82 394 aa13.12□□□□□ -0.31
NUP58-206ENST00000463407 DDX20Q9UHI6 824 aaKnown RBP13.12□□□□□ -0.31
NUP58-206ENST00000463407 FAM153AQ9UHL3 310 aa13.12□□□□□ -0.31
NUP58-206ENST00000463407 COL1A2P08123 1366 aa13.12□□□□□ -0.31
NUP58-206ENST00000463407 WDR27A2RRH5 827 aa13.11□□□□□ -0.31
NUP58-206ENST00000463407 SEPT4O43236 478 aa13.11□□□□□ -0.31
NUP58-206ENST00000463407 FAM107AO95990 144 aa13.11□□□□□ -0.31
NUP58-206ENST00000463407 MIPP30301 263 aa13.11□□□□□ -0.31
NUP58-206ENST00000463407 DDR2Q16832 855 aa13.11□□□□□ -0.31
NUP58-206ENST00000463407 APBB2Q92870 758 aa13.11□□□□□ -0.31
NUP58-206ENST00000463407 WNT8BQ93098 351 aa13.11□□□□□ -0.31
NUP58-206ENST00000463407 ACOX2Q99424 681 aa13.11□□□□□ -0.31
NUP58-206ENST00000463407 KLC4Q9NSK0 619 aa13.11□□□□□ -0.31
NUP58-206ENST00000463407 RPS6KB2Q9UBS0 482 aa13.11□□□□□ -0.31
NUP58-206ENST00000463407 PADI4Q9UM07 663 aa13.11□□□□□ -0.31
NUP58-206ENST00000463407 MRC1P22897 1456 aa13.11□□□□□ -0.31
NUP58-206ENST00000463407 ADRB2P07550 413 aa13.11□□□□□ -0.31
NUP58-206ENST00000463407 NME5P56597 212 aa13.11□□□□□ -0.31
NUP58-206ENST00000463407 XRCC4Q13426 336 aa13.11□□□□□ -0.31
NUP58-206ENST00000463407 PPIGQ13427 754 aaKnown RBP eCLIP13.11□□□□□ -0.311e-7■□□□□ 8.8
NUP58-206ENST00000463407 SERPINA13PQ6UXR4 307 aa13.11□□□□□ -0.31
NUP58-206ENST00000463407 SETD3Q86TU7 594 aaPredicted RBP13.11□□□□□ -0.31
NUP58-206ENST00000463407 ARID3BQ8IVW6 561 aaPredicted RBP13.11□□□□□ -0.31
NUP58-206ENST00000463407 C2orf49Q9BVC5 232 aaPredicted RBP13.11□□□□□ -0.31
NUP58-206ENST00000463407 RNPEPQ9H4A4 650 aa13.11□□□□□ -0.31
NUP58-206ENST00000463407 LAG3P18627 525 aa13.11□□□□□ -0.31
NUP58-206ENST00000463407 CNTFP26441 200 aa13.11□□□□□ -0.31
NUP58-206ENST00000463407 CHKAP35790 457 aa13.11□□□□□ -0.31
NUP58-206ENST00000463407 CASP5P51878 434 aa13.11□□□□□ -0.31
NUP58-206ENST00000463407 SNRPD1P62314 119 aaKnown RBP13.11□□□□□ -0.31
NUP58-206ENST00000463407 CNGA3Q16281 694 aa13.11□□□□□ -0.31
NUP58-206ENST00000463407 GPR20Q99678 358 aa13.11□□□□□ -0.31
NUP58-206ENST00000463407 POLR1EQ9GZS1 481 aaKnown RBP13.11□□□□□ -0.31
NUP58-206ENST00000463407 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.11□□□□□ -0.31
NUP58-206ENST00000463407 EIF4E1BA6NMX2 242 aaKnown RBP13.11□□□□□ -0.31
NUP58-206ENST00000463407 RPN2P04844 631 aa13.11□□□□□ -0.31
NUP58-206ENST00000463407 PSEN1P49768 467 aa13.11□□□□□ -0.31
NUP58-206ENST00000463407 BLVRAP53004 296 aa13.11□□□□□ -0.31
NUP58-206ENST00000463407 ALDH6A1Q02252 535 aaKnown RBP13.11□□□□□ -0.31
NUP58-206ENST00000463407 MAP3K10Q02779 954 aa13.11□□□□□ -0.31
NUP58-206ENST00000463407 TMED1Q13445 227 aa13.11□□□□□ -0.31
NUP58-206ENST00000463407 ZNF697Q5TEC3 545 aa13.11□□□□□ -0.31
NUP58-206ENST00000463407 FAM183BPQ6ZVS7 135 aa13.11□□□□□ -0.31
NUP58-206ENST00000463407 ELOVL6Q9H5J4 265 aa13.11□□□□□ -0.31
NUP58-206ENST00000463407 PHTF1Q9UMS5 762 aa13.11□□□□□ -0.31
NUP58-206ENST00000463407 ACOT9Q9Y305 439 aa13.11□□□□□ -0.31
NUP58-206ENST00000463407 ASTN2O75129 1339 aaPredicted RBP13.11□□□□□ -0.31
NUP58-206ENST00000463407 LOC100653049A0A140TA62 436 aa13.11□□□□□ -0.31
NUP58-206ENST00000463407 RNF103O00237 685 aa13.11□□□□□ -0.31
NUP58-206ENST00000463407 KRT34O76011 436 aa13.11□□□□□ -0.31
NUP58-206ENST00000463407 CALCAP01258 141 aa13.11□□□□□ -0.31
NUP58-206ENST00000463407 INHAP05111 366 aa13.11□□□□□ -0.31
NUP58-206ENST00000463407 PAX3P23760 479 aa13.11□□□□□ -0.31
NUP58-206ENST00000463407 MGAT1P26572 445 aa13.11□□□□□ -0.31
NUP58-206ENST00000463407 TCEA2Q15560 299 aa13.11□□□□□ -0.31
NUP58-206ENST00000463407 AASDHQ4L235 1098 aaPredicted RBP13.11□□□□□ -0.31
NUP58-206ENST00000463407 ANKRD7Q92527 254 aa13.11□□□□□ -0.31
NUP58-206ENST00000463407 CASP10Q92851 521 aa13.11□□□□□ -0.31
NUP58-206ENST00000463407 NSL1Q96IY1 281 aa13.11□□□□□ -0.31
NUP58-206ENST00000463407 OR12D3Q9UGF7 316 aa13.11□□□□□ -0.31
NUP58-206ENST00000463407 HACD1B0YJ81 288 aa13.1□□□□□ -0.31
NUP58-206ENST00000463407 PEX10O60683 326 aa13.1□□□□□ -0.31
NUP58-206ENST00000463407 ITGB5P18084 799 aa13.1□□□□□ -0.31
NUP58-206ENST00000463407 GET4Q7L5D6 327 aaPredicted RBP13.1□□□□□ -0.31
NUP58-206ENST00000463407 SPATA20Q8TB22 786 aa13.1□□□□□ -0.31
NUP58-206ENST00000463407 ABTB1Q969K4 478 aaPredicted RBP13.1□□□□□ -0.31
NUP58-206ENST00000463407 ACTR8Q9H981 624 aa13.1□□□□□ -0.31
NUP58-206ENST00000463407 PCDH9Q9HC56 1237 aa13.1□□□□□ -0.31
NUP58-206ENST00000463407 TBC1D4O60343 1298 aa13.1□□□□□ -0.31
NUP58-206ENST00000463407 GRM5P41594 1212 aa13.1□□□□□ -0.31
NUP58-206ENST00000463407 NPY2RP49146 381 aa13.1□□□□□ -0.31
NUP58-206ENST00000463407 ALDH9A1P49189 494 aa13.1□□□□□ -0.31
NUP58-206ENST00000463407 LRRC36Q1X8D7 754 aa13.1□□□□□ -0.31
NUP58-206ENST00000463407 LRRC8DQ7L1W4 858 aa13.1□□□□□ -0.31
NUP58-206ENST00000463407 OSBPL1AQ9BXW6 950 aa13.1□□□□□ -0.31
NUP58-206ENST00000463407 C1QTNF3-AMACRE9PGA6 284 aa13.1□□□□□ -0.31
NUP58-206ENST00000463407 KCNK1O00180 336 aa13.1□□□□□ -0.31
NUP58-206ENST00000463407 FGF10O15520 208 aaPredicted RBP13.1□□□□□ -0.31
NUP58-206ENST00000463407 CD151P48509 253 aa13.1□□□□□ -0.31
NUP58-206ENST00000463407 MGAT5Q09328 741 aa13.1□□□□□ -0.31
NUP58-206ENST00000463407 NLRP9Q7RTR0 991 aa13.1□□□□□ -0.31
NUP58-206ENST00000463407 TRAPPC5Q8IUR0 188 aa13.1□□□□□ -0.31
NUP58-206ENST00000463407 C3orf20Q8ND61 904 aa13.1□□□□□ -0.31
NUP58-206ENST00000463407 TTPALQ9BTX7 342 aa13.1□□□□□ -0.31
NUP58-206ENST00000463407 BTBD7Q9P203 1132 aa13.1□□□□□ -0.31
NUP58-206ENST00000463407 RIPK3Q9Y572 518 aa13.1□□□□□ -0.31
NUP58-206ENST00000463407 TRUB2O95900 331 aaKnown RBP13.1□□□□□ -0.31
NUP58-206ENST00000463407 BRCC3P46736 316 aa13.1□□□□□ -0.31
NUP58-206ENST00000463407 CPA2P48052 419 aa13.1□□□□□ -0.31
NUP58-206ENST00000463407 PPP3CAQ08209 521 aa13.1□□□□□ -0.31
NUP58-206ENST00000463407 CYTH1Q15438 398 aa13.1□□□□□ -0.31
NUP58-206ENST00000463407 KCNMB4Q86W47 210 aa13.1□□□□□ -0.31
NUP58-206ENST00000463407 ZSWIM2Q8NEG5 633 aa13.1□□□□□ -0.31
NUP58-206ENST00000463407 CYGBQ8WWM9 190 aa13.1□□□□□ -0.31
NUP58-206ENST00000463407 VMP1Q96GC9 406 aa13.1□□□□□ -0.31
NUP58-206ENST00000463407 NXF3Q9H4D5 531 aaKnown RBP13.1□□□□□ -0.31
NUP58-206ENST00000463407 PCDHA3Q9Y5H8 950 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms