RNA–Protein interactions for RNA: ENST00000462306.5

ERCC3-206, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 963 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-206ENST00000462306 HHIPQ96QV1 700 aa16.41■□□□□ 0.22
ERCC3-206ENST00000462306 ACOX2Q99424 681 aa16.41■□□□□ 0.22
ERCC3-206ENST00000462306 WDCPQ9H6R7 721 aa16.41■□□□□ 0.22
ERCC3-206ENST00000462306 TMEM51Q9NW97 253 aa16.41■□□□□ 0.22
ERCC3-206ENST00000462306 STIM2Q9P246 746 aa16.41■□□□□ 0.22
ERCC3-206ENST00000462306 LUC7L2Q9Y383 392 aaKnown RBP16.41■□□□□ 0.22
ERCC3-206ENST00000462306 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.41■□□□□ 0.222e-7■■■■□ 24.7
ERCC3-206ENST00000462306 CCDC163A0A0D9SF12 145 aa16.4■□□□□ 0.22
ERCC3-206ENST00000462306 SIGLEC16A6NMB1 481 aa16.4■□□□□ 0.22
ERCC3-206ENST00000462306 PAGE1O75459 146 aa16.4■□□□□ 0.22
ERCC3-206ENST00000462306 GZMAP12544 262 aa16.4■□□□□ 0.22
ERCC3-206ENST00000462306 PDGFRAP16234 1089 aa16.4■□□□□ 0.22
ERCC3-206ENST00000462306 CASP14P31944 242 aa16.4■□□□□ 0.22
ERCC3-206ENST00000462306 RFC1P35251 1148 aaPredicted RBP16.4■□□□□ 0.22
ERCC3-206ENST00000462306 PTPN9P43378 593 aa16.4■□□□□ 0.22
ERCC3-206ENST00000462306 RAB6CQ53S08 254 aa16.4■□□□□ 0.22
ERCC3-206ENST00000462306 EOGTQ5NDL2 527 aa16.4■□□□□ 0.22
ERCC3-206ENST00000462306 PPP1R15BQ5SWA1 713 aa16.4■□□□□ 0.22
ERCC3-206ENST00000462306 PPP1R2P3Q6NXS1 205 aa16.4■□□□□ 0.22
ERCC3-206ENST00000462306 FBXL22Q6P050 247 aa16.4■□□□□ 0.22
ERCC3-206ENST00000462306 TRMT11Q7Z4G4 463 aaKnown RBP16.4■□□□□ 0.22
ERCC3-206ENST00000462306 WDR5BQ86VZ2 330 aa16.4■□□□□ 0.22
ERCC3-206ENST00000462306 VSTM4Q8IW00 320 aa16.4■□□□□ 0.22
ERCC3-206ENST00000462306 FIBINQ8TAL6 211 aa16.4■□□□□ 0.22
ERCC3-206ENST00000462306 VCPIP1Q96JH7 1222 aa16.4■□□□□ 0.22
ERCC3-206ENST00000462306 TKTL2Q9H0I9 626 aa16.4■□□□□ 0.22
ERCC3-206ENST00000462306 RAB6CQ9H0N0 254 aa16.4■□□□□ 0.22
ERCC3-206ENST00000462306 SEMA4AQ9H3S1 761 aa16.4■□□□□ 0.22
ERCC3-206ENST00000462306 ABCB8Q9NUT2 735 aa16.4■□□□□ 0.22
ERCC3-206ENST00000462306 ELOVL2Q9NXB9 296 aa16.4■□□□□ 0.22
ERCC3-206ENST00000462306 HS3ST4Q9Y661 456 aa16.4■□□□□ 0.22
ERCC3-206ENST00000462306 MYO18AQ92614 2054 aaKnown RBP16.39■□□□□ 0.21
ERCC3-206ENST00000462306 TMCO5BA8MYB1 307 aa16.39■□□□□ 0.21
ERCC3-206ENST00000462306 F5H5T6 163 aa16.39■□□□□ 0.21
ERCC3-206ENST00000462306 AP5Z1O43299 807 aa16.39■□□□□ 0.21
ERCC3-206ENST00000462306 APBB3O95704 486 aa16.39■□□□□ 0.21
ERCC3-206ENST00000462306 RRM1P23921 792 aa16.39■□□□□ 0.21
ERCC3-206ENST00000462306 NTSR1P30989 418 aa16.39■□□□□ 0.21
ERCC3-206ENST00000462306 CD70P32970 193 aa16.39■□□□□ 0.21
ERCC3-206ENST00000462306 RDXP35241 583 aaKnown RBP16.39■□□□□ 0.21
ERCC3-206ENST00000462306 DGKEP52429 567 aa16.39■□□□□ 0.21
ERCC3-206ENST00000462306 ATP11AP98196 1134 aa16.39■□□□□ 0.21
ERCC3-206ENST00000462306 AUHQ13825 339 aaKnown RBP16.39■□□□□ 0.21
ERCC3-206ENST00000462306 EIF4HQ15056 248 aaKnown RBP16.39■□□□□ 0.21
ERCC3-206ENST00000462306 C15orf59Q2T9L4 293 aaPredicted RBP16.39■□□□□ 0.21
ERCC3-206ENST00000462306 SH3PXD2AQ5TCZ1 1133 aa16.39■□□□□ 0.21
ERCC3-206ENST00000462306 SPECC1LQ69YQ0 1117 aa16.39■□□□□ 0.21
ERCC3-206ENST00000462306 DNAJC24Q6P3W2 148 aa16.39■□□□□ 0.21
ERCC3-206ENST00000462306 WDR59Q6PJI9 974 aa16.39■□□□□ 0.21
ERCC3-206ENST00000462306 SND1Q7KZF4 910 aaKnown RBP eCLIP16.39■□□□□ 0.21
ERCC3-206ENST00000462306 ADIPOR2Q86V24 386 aa16.39■□□□□ 0.21
ERCC3-206ENST00000462306 DNAAF5Q86Y56 855 aa16.39■□□□□ 0.21
ERCC3-206ENST00000462306 MFN1Q8IWA4 741 aa16.39■□□□□ 0.21
ERCC3-206ENST00000462306 TSTD1Q8NFU3 115 aa16.39■□□□□ 0.21
ERCC3-206ENST00000462306 WFIKKN2Q8TEU8 576 aa16.39■□□□□ 0.21
ERCC3-206ENST00000462306 CENPIQ92674 756 aaPredicted RBP16.39■□□□□ 0.21
ERCC3-206ENST00000462306 GABRG3Q99928 467 aa16.39■□□□□ 0.21
ERCC3-206ENST00000462306 SELENOOQ9BVL4 669 aa16.39■□□□□ 0.21
ERCC3-206ENST00000462306 TMPRSS4Q9NRS4 437 aa16.39■□□□□ 0.21
ERCC3-206ENST00000462306 THAP10Q9P2Z0 257 aaPredicted RBP16.39■□□□□ 0.21
ERCC3-206ENST00000462306 EBF1Q9UH73 591 aa16.39■□□□□ 0.21
ERCC3-206ENST00000462306 GGA2Q9UJY4 613 aa16.39■□□□□ 0.21
ERCC3-206ENST00000462306 PAXBP1Q9Y5B6 917 aa16.39■□□□□ 0.21
ERCC3-206ENST00000462306 BZW2Q9Y6E2 419 aaKnown RBP16.39■□□□□ 0.21
ERCC3-206ENST00000462306 MYO15AQ9UKN7 3530 aa16.39■□□□□ 0.21
ERCC3-206ENST00000462306 DMDP11532 3685 aa16.38■□□□□ 0.21
ERCC3-206ENST00000462306 A0A1W2PQF6 199 aa16.38■□□□□ 0.21
ERCC3-206ENST00000462306 TYW5A2RUC4 315 aaKnown RBP16.38■□□□□ 0.21
ERCC3-206ENST00000462306 HRO43593 1189 aa16.38■□□□□ 0.21
ERCC3-206ENST00000462306 TIMM44O43615 452 aa16.38■□□□□ 0.21
ERCC3-206ENST00000462306 LUC7L3O95232 432 aaKnown RBP16.38■□□□□ 0.21
ERCC3-206ENST00000462306 FTLP02792 175 aaPredicted RBP16.38■□□□□ 0.21
ERCC3-206ENST00000462306 SERPING1P05155 500 aa16.38■□□□□ 0.21
ERCC3-206ENST00000462306 PLEKP08567 350 aaPredicted RBP16.38■□□□□ 0.21
ERCC3-206ENST00000462306 PABPC1P11940 636 aaKnown RBP16.38■□□□□ 0.21
ERCC3-206ENST00000462306 SDC4P31431 198 aa16.38■□□□□ 0.21
ERCC3-206ENST00000462306 HNRNPH3P31942 346 aaKnown RBP16.38■□□□□ 0.21
ERCC3-206ENST00000462306 GGCXP38435 758 aa16.38■□□□□ 0.21
ERCC3-206ENST00000462306 WASP42768 502 aa16.38■□□□□ 0.21
ERCC3-206ENST00000462306 RPL7AP62424 266 aaKnown RBP16.38■□□□□ 0.21
ERCC3-206ENST00000462306 ENPP2Q13822 863 aa16.38■□□□□ 0.21
ERCC3-206ENST00000462306 C5orf22Q49AR2 442 aa16.38■□□□□ 0.21
ERCC3-206ENST00000462306 TDRD12Q587J7 1177 aaKnown RBP16.38■□□□□ 0.21
ERCC3-206ENST00000462306 FSCBQ5H9T9 825 aa16.38■□□□□ 0.21
ERCC3-206ENST00000462306 ARTNQ5T4W7 220 aa16.38■□□□□ 0.21
ERCC3-206ENST00000462306 SARM1Q6SZW1 724 aa16.38■□□□□ 0.21
ERCC3-206ENST00000462306 CHST9Q7L1S5 443 aa16.38■□□□□ 0.21
ERCC3-206ENST00000462306 ASCL5Q7RTU5 278 aa16.38■□□□□ 0.21
ERCC3-206ENST00000462306 C14orf80Q86SX3 495 aa16.38■□□□□ 0.21
ERCC3-206ENST00000462306 RASSF3Q86WH2 238 aa16.38■□□□□ 0.21
ERCC3-206ENST00000462306 FAM131BQ86XD5 332 aa16.38■□□□□ 0.21
ERCC3-206ENST00000462306 CHPFQ8IZ52 775 aa16.38■□□□□ 0.21
ERCC3-206ENST00000462306 CARNMT1Q8N4J0 409 aa16.38■□□□□ 0.21
ERCC3-206ENST00000462306 ZNF557Q8N988 423 aaPredicted RBP16.38■□□□□ 0.21
ERCC3-206ENST00000462306 SUMF1Q8NBK3 374 aa16.38■□□□□ 0.21
ERCC3-206ENST00000462306 SORCS1Q8WY21 1168 aa16.38■□□□□ 0.21
ERCC3-206ENST00000462306 NKD2Q969F2 451 aaPredicted RBP16.38■□□□□ 0.21
ERCC3-206ENST00000462306 IGSF8Q969P0 613 aa16.38■□□□□ 0.21
ERCC3-206ENST00000462306 SIK2Q9H0K1 926 aa16.38■□□□□ 0.21
ERCC3-206ENST00000462306 RBSNQ9H1K0 784 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms