RNA–Protein interactions for RNA: ENST00000462165.2

CBX3-205, Transcript of chromobox 3, humanhuman

TSL 3

Gene CBX3, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-205ENST00000462165 GCLMP48507 274 aa11.31□□□□□ -0.6
CBX3-205ENST00000462165 TKTL1P51854 596 aa11.31□□□□□ -0.6
CBX3-205ENST00000462165 ENPEPQ07075 957 aa11.31□□□□□ -0.6
CBX3-205ENST00000462165 PPP3CAQ08209 521 aa11.31□□□□□ -0.6
CBX3-205ENST00000462165 RTP5Q14D33 572 aa11.31□□□□□ -0.6
CBX3-205ENST00000462165 NFIL3Q16649 462 aa11.31□□□□□ -0.6
CBX3-205ENST00000462165 KMT5BQ4FZB7 885 aa11.31□□□□□ -0.6
CBX3-205ENST00000462165 ADGRF1Q5T601 910 aa11.31□□□□□ -0.6
CBX3-205ENST00000462165 RESP18Q5W5W9 173 aa11.31□□□□□ -0.6
CBX3-205ENST00000462165 MBLAC2Q68D91 279 aa11.31□□□□□ -0.6
CBX3-205ENST00000462165 ARHGAP17Q68EM7 881 aa11.31□□□□□ -0.6
CBX3-205ENST00000462165 INTS8Q75QN2 995 aaKnown RBP11.31□□□□□ -0.6
CBX3-205ENST00000462165 GATAD2AQ86YP4 633 aa11.31□□□□□ -0.6
CBX3-205ENST00000462165 GRAMD1CQ8IYS0 662 aa11.31□□□□□ -0.6
CBX3-205ENST00000462165 CEP57L1Q8IYX8 460 aa11.31□□□□□ -0.6
CBX3-205ENST00000462165 SLC4A11Q8NBS3 891 aa11.31□□□□□ -0.6
CBX3-205ENST00000462165 SAP25Q8TEE9 199 aa11.31□□□□□ -0.6
CBX3-205ENST00000462165 SKA1Q96BD8 255 aa11.31□□□□□ -0.6
CBX3-205ENST00000462165 MYO19Q96H55 970 aa11.31□□□□□ -0.6
CBX3-205ENST00000462165 TMEM176AQ96HP8 235 aa11.31□□□□□ -0.6
CBX3-205ENST00000462165 CNDP2Q96KP4 475 aaKnown RBP11.31□□□□□ -0.6
CBX3-205ENST00000462165 HEXIM2Q96MH2 286 aaKnown RBP11.31□□□□□ -0.6
CBX3-205ENST00000462165 SLC6A18Q96N87 628 aa11.31□□□□□ -0.6
CBX3-205ENST00000462165 NRSN2Q9GZP1 204 aa11.31□□□□□ -0.6
CBX3-205ENST00000462165 RSPH9Q9H1X1 276 aaPredicted RBP11.31□□□□□ -0.6
CBX3-205ENST00000462165 FAM13BQ9NYF5 915 aa11.31□□□□□ -0.6
CBX3-205ENST00000462165 TRAF3IP3Q9Y228 551 aa11.31□□□□□ -0.6
CBX3-205ENST00000462165 NCKAP1Q9Y2A7 1128 aa11.31□□□□□ -0.6
CBX3-205ENST00000462165 ARID1BQ8NFD5 2236 aaPredicted RBP11.3□□□□□ -0.6
CBX3-205ENST00000462165 C10orf142B7Z368 130 aa11.3□□□□□ -0.6
CBX3-205ENST00000462165 YKT6O15498 198 aa11.3□□□□□ -0.6
CBX3-205ENST00000462165 RRP8O43159 456 aaKnown RBP11.3□□□□□ -0.6
CBX3-205ENST00000462165 CALUO43852 315 aaPredicted RBP11.3□□□□□ -0.6
CBX3-205ENST00000462165 WNT1P04628 370 aa11.3□□□□□ -0.6
CBX3-205ENST00000462165 ITGAVP06756 1048 aa11.3□□□□□ -0.6
CBX3-205ENST00000462165 TRIM49P0CI25 452 aa11.3□□□□□ -0.6
CBX3-205ENST00000462165 TRIM49CP0CI26 452 aa11.3□□□□□ -0.6
CBX3-205ENST00000462165 PDIA4P13667 645 aaKnown RBP11.3□□□□□ -0.6
CBX3-205ENST00000462165 POLR2EP19388 210 aaKnown RBP11.3□□□□□ -0.6
CBX3-205ENST00000462165 ACADVLP49748 655 aa11.3□□□□□ -0.6
CBX3-205ENST00000462165 GALCP54803 685 aa11.3□□□□□ -0.6
CBX3-205ENST00000462165 CLDN6P56747 220 aa11.3□□□□□ -0.6
CBX3-205ENST00000462165 SLC8A3P57103 927 aa11.3□□□□□ -0.6
CBX3-205ENST00000462165 SFSWAPQ12872 951 aaKnown RBP11.3□□□□□ -0.6
CBX3-205ENST00000462165 DNAJC3Q13217 504 aa11.3□□□□□ -0.6
CBX3-205ENST00000462165 SHBQ15464 509 aa11.3□□□□□ -0.6
CBX3-205ENST00000462165 PRAMEF14Q5SWL7 426 aa11.3□□□□□ -0.6
CBX3-205ENST00000462165 MPP7Q5T2T1 576 aa11.3□□□□□ -0.6
CBX3-205ENST00000462165 ZNF557Q8N988 423 aaPredicted RBP11.3□□□□□ -0.6
CBX3-205ENST00000462165 ANKRD52Q8NB46 1076 aa11.3□□□□□ -0.6
CBX3-205ENST00000462165 CCDC150Q8NCX0 1101 aa11.3□□□□□ -0.6
CBX3-205ENST00000462165 SNIP1Q8TAD8 396 aaKnown RBP11.3□□□□□ -0.6
CBX3-205ENST00000462165 IRX2Q9BZI1 471 aaPredicted RBP11.3□□□□□ -0.6
CBX3-205ENST00000462165 ULBP1Q9BZM6 244 aa11.3□□□□□ -0.6
CBX3-205ENST00000462165 PABPC3Q9H361 631 aaKnown RBP11.3□□□□□ -0.6
CBX3-205ENST00000462165 EBF2Q9HAK2 575 aa11.3□□□□□ -0.6
CBX3-205ENST00000462165 TMEM8AQ9HCN3 771 aa11.3□□□□□ -0.6
CBX3-205ENST00000462165 FBXL12Q9NXK8 326 aa11.3□□□□□ -0.6
CBX3-205ENST00000462165 SFMBT1Q9UHJ3 866 aa11.3□□□□□ -0.6
CBX3-205ENST00000462165 SERTAD1Q9UHV2 236 aa11.3□□□□□ -0.6
CBX3-205ENST00000462165 PCDHA7Q9UN72 937 aa11.3□□□□□ -0.6
CBX3-205ENST00000462165 AK5Q9Y6K8 562 aa11.3□□□□□ -0.6
CBX3-205ENST00000462165 FAM47DPA6NHR8 397 aa11.29□□□□□ -0.6
CBX3-205ENST00000462165 CBX4O00257 560 aa11.29□□□□□ -0.6
CBX3-205ENST00000462165 TULP2O00295 520 aa11.29□□□□□ -0.6
CBX3-205ENST00000462165 XPO1O14980 1071 aaKnown RBP11.29□□□□□ -0.6
CBX3-205ENST00000462165 ACTN4O43707 911 aaKnown RBP11.29□□□□□ -0.6
CBX3-205ENST00000462165 KRT13P13646 458 aa11.29□□□□□ -0.6
CBX3-205ENST00000462165 ABCB4P21439 1286 aa11.29□□□□□ -0.6
CBX3-205ENST00000462165 NR2F2P24468 414 aa11.29□□□□□ -0.6
CBX3-205ENST00000462165 CD70P32970 193 aa11.29□□□□□ -0.6
CBX3-205ENST00000462165 SGSHP51688 502 aa11.29□□□□□ -0.6
CBX3-205ENST00000462165 RAD23BP54727 409 aa11.29□□□□□ -0.6
CBX3-205ENST00000462165 MCCD1P59942 119 aaPredicted RBP11.29□□□□□ -0.6
CBX3-205ENST00000462165 SEMG2Q02383 582 aa11.29□□□□□ -0.6
CBX3-205ENST00000462165 TARDBPQ13148 414 aaKnown RBP eCLIP11.29□□□□□ -0.6
CBX3-205ENST00000462165 HES3Q5TGS1 186 aa11.29□□□□□ -0.6
CBX3-205ENST00000462165 FBXL19Q6PCT2 694 aa11.29□□□□□ -0.6
CBX3-205ENST00000462165 WFDC5Q8TCV5 224 aa11.29□□□□□ -0.6
CBX3-205ENST00000462165 BAP1Q92560 729 aa11.29□□□□□ -0.6
CBX3-205ENST00000462165 TSC1Q92574 1164 aa11.29□□□□□ -0.6
CBX3-205ENST00000462165 NDRG1Q92597 394 aaKnown RBP11.29□□□□□ -0.6
CBX3-205ENST00000462165 TTC17Q96AE7 1141 aa11.29□□□□□ -0.6
CBX3-205ENST00000462165 PAGE5Q96GU1 130 aa11.29□□□□□ -0.6
CBX3-205ENST00000462165 LMLNQ96KR4 655 aa11.29□□□□□ -0.6
CBX3-205ENST00000462165 FCRL3Q96P31 734 aaPredicted RBP11.29□□□□□ -0.6
CBX3-205ENST00000462165 MMRN2Q9H8L6 949 aa11.29□□□□□ -0.6
CBX3-205ENST00000462165 CISHQ9NSE2 258 aa11.29□□□□□ -0.6
CBX3-205ENST00000462165 ABCC13Q9NSE7 274 aa11.29□□□□□ -0.6
CBX3-205ENST00000462165 SERGEFQ9UGK8 458 aa11.29□□□□□ -0.6
CBX3-205ENST00000462165 ADAMTS1Q9UHI8 967 aa11.29□□□□□ -0.6
CBX3-205ENST00000462165 RAI2Q9Y5P3 530 aa11.29□□□□□ -0.6
CBX3-205ENST00000462165 TEX51A0A1B0GUA7 166 aa11.28□□□□□ -0.6
CBX3-205ENST00000462165 A0A1W2PR77 199 aa11.28□□□□□ -0.6
CBX3-205ENST00000462165 LRRC72A6NJI9 287 aa11.28□□□□□ -0.6
CBX3-205ENST00000462165 IRAK2O43187 625 aa11.28□□□□□ -0.6
CBX3-205ENST00000462165 TBL1XO60907 577 aa11.28□□□□□ -0.6
CBX3-205ENST00000462165 RNASEH1O60930 286 aaKnown RBP11.28□□□□□ -0.6
CBX3-205ENST00000462165 SIN3BO75182 1162 aa11.28□□□□□ -0.6
CBX3-205ENST00000462165 ASLP04424 464 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms