RNA–Protein interactions for RNA: ENST00000461433.1

SSBP1-202, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 1,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-202ENST00000461433 PI4K2BG5E9Z4 385 aa11.65□□□□□ -0.54
SSBP1-202ENST00000461433 NRDCO43847 1150 aa11.65□□□□□ -0.54
SSBP1-202ENST00000461433 CCDC175P0C221 793 aa11.65□□□□□ -0.54
SSBP1-202ENST00000461433 TYRP14679 529 aa11.65□□□□□ -0.54
SSBP1-202ENST00000461433 GLULP15104 373 aa11.65□□□□□ -0.54
SSBP1-202ENST00000461433 DESP17661 470 aa11.65□□□□□ -0.54
SSBP1-202ENST00000461433 HOXD9P28356 352 aaPredicted RBP11.65□□□□□ -0.54
SSBP1-202ENST00000461433 CTHP32929 405 aa11.65□□□□□ -0.54
SSBP1-202ENST00000461433 OPRD1P41143 372 aa11.65□□□□□ -0.54
SSBP1-202ENST00000461433 SLC6A11P48066 632 aa11.65□□□□□ -0.54
SSBP1-202ENST00000461433 RPS24P62847 133 aaKnown RBP11.65□□□□□ -0.54
SSBP1-202ENST00000461433 NRG1Q02297 640 aaPredicted RBP11.65□□□□□ -0.54
SSBP1-202ENST00000461433 MESP2Q0VG99 397 aa11.65□□□□□ -0.54
SSBP1-202ENST00000461433 KIF5AQ12840 1032 aa11.65□□□□□ -0.54
SSBP1-202ENST00000461433 NR1H3Q13133 447 aa11.65□□□□□ -0.54
SSBP1-202ENST00000461433 SEMA3BQ13214 749 aa11.65□□□□□ -0.54
SSBP1-202ENST00000461433 MLF2Q15773 248 aaPredicted RBP11.65□□□□□ -0.54
SSBP1-202ENST00000461433 CA9Q16790 459 aa11.65□□□□□ -0.54
SSBP1-202ENST00000461433 ANO4Q32M45 955 aa11.65□□□□□ -0.54
SSBP1-202ENST00000461433 MPPE1Q53F39 396 aa11.65□□□□□ -0.54
SSBP1-202ENST00000461433 ERMARDQ5T6L9 678 aa11.65□□□□□ -0.54
SSBP1-202ENST00000461433 MANEALQ5VSG8 457 aa11.65□□□□□ -0.54
SSBP1-202ENST00000461433 RALGPS2Q86X27 583 aaPredicted RBP11.65□□□□□ -0.54
SSBP1-202ENST00000461433 CHSY1Q86X52 802 aa11.65□□□□□ -0.54
SSBP1-202ENST00000461433 CFAP52Q8N1V2 620 aa11.65□□□□□ -0.54
SSBP1-202ENST00000461433 BHMTQ93088 406 aa11.65□□□□□ -0.54
SSBP1-202ENST00000461433 SNRNP25Q9BV90 132 aaKnown RBP11.65□□□□□ -0.54
SSBP1-202ENST00000461433 BBS2Q9BXC9 721 aa11.65□□□□□ -0.54
SSBP1-202ENST00000461433 GOLPH3Q9H4A6 298 aa11.65□□□□□ -0.54
SSBP1-202ENST00000461433 C8orf33Q9H7E9 229 aaPredicted RBP11.65□□□□□ -0.54
SSBP1-202ENST00000461433 FBRSL1Q9HCM7 1045 aaKnown RBP11.65□□□□□ -0.54
SSBP1-202ENST00000461433 GPATCH2LQ9NWQ4 482 aa11.65□□□□□ -0.54
SSBP1-202ENST00000461433 OR12D3Q9UGF7 316 aa11.65□□□□□ -0.54
SSBP1-202ENST00000461433 FBXO10Q9UK96 956 aa11.65□□□□□ -0.54
SSBP1-202ENST00000461433 VANGL2Q9ULK5 521 aa11.65□□□□□ -0.54
SSBP1-202ENST00000461433 CA14Q9ULX7 337 aa11.65□□□□□ -0.54
SSBP1-202ENST00000461433 NEU3Q9UQ49 428 aa11.65□□□□□ -0.54
SSBP1-202ENST00000461433 PPP2R2CQ9Y2T4 447 aa11.65□□□□□ -0.54
SSBP1-202ENST00000461433 BDP1A6H8Y1 2624 aa11.65□□□□□ -0.54
SSBP1-202ENST00000461433 DRGXA6NNA5 263 aa11.65□□□□□ -0.55
SSBP1-202ENST00000461433 F5H5T6 163 aa11.65□□□□□ -0.55
SSBP1-202ENST00000461433 TRIM24O15164 1050 aa11.65□□□□□ -0.55
SSBP1-202ENST00000461433 PRPSAP2O60256 369 aa11.65□□□□□ -0.55
SSBP1-202ENST00000461433 CACNG3O60359 315 aa11.65□□□□□ -0.55
SSBP1-202ENST00000461433 CISD3P0C7P0 127 aa11.65□□□□□ -0.55
SSBP1-202ENST00000461433 STARD6P59095 220 aa11.65□□□□□ -0.55
SSBP1-202ENST00000461433 ATP13A4Q4VNC1 1196 aa11.65□□□□□ -0.55
SSBP1-202ENST00000461433 KCNT1Q5JUK3 1230 aa11.65□□□□□ -0.55
SSBP1-202ENST00000461433 MPP7Q5T2T1 576 aa11.65□□□□□ -0.55
SSBP1-202ENST00000461433 ACBD5Q5T8D3 534 aaPredicted RBP11.65□□□□□ -0.55
SSBP1-202ENST00000461433 ASTLQ6HA08 431 aaPredicted RBP11.65□□□□□ -0.55
SSBP1-202ENST00000461433 ZNF687Q8N1G0 1237 aa11.65□□□□□ -0.55
SSBP1-202ENST00000461433 PHTF2Q8N3S3 785 aa11.65□□□□□ -0.55
SSBP1-202ENST00000461433 NAT16Q8N8M0 369 aa11.65□□□□□ -0.55
SSBP1-202ENST00000461433 LRRC57Q8N9N7 239 aa11.65□□□□□ -0.55
SSBP1-202ENST00000461433 DDI1Q8WTU0 396 aa11.65□□□□□ -0.55
SSBP1-202ENST00000461433 ARHGEF3Q9NR81 526 aa11.65□□□□□ -0.55
SSBP1-202ENST00000461433 AP4E1Q9UPM8 1137 aa11.65□□□□□ -0.55
SSBP1-202ENST00000461433 HYOU1Q9Y4L1 999 aa11.65□□□□□ -0.55
SSBP1-202ENST00000461433 ALG6Q9Y672 507 aa11.65□□□□□ -0.55
SSBP1-202ENST00000461433 TECTAO75443 2155 aa11.64□□□□□ -0.55
SSBP1-202ENST00000461433 MACROD2A1Z1Q3 448 aa11.64□□□□□ -0.55
SSBP1-202ENST00000461433 GRID2IPA4D2P6 1211 aa11.64□□□□□ -0.55
SSBP1-202ENST00000461433 E9PAM4 449 aa11.64□□□□□ -0.55
SSBP1-202ENST00000461433 TBL1XO60907 577 aa11.64□□□□□ -0.55
SSBP1-202ENST00000461433 SRGAP2O75044 1071 aa11.64□□□□□ -0.55
SSBP1-202ENST00000461433 TULP3O75386 442 aa11.64□□□□□ -0.55
SSBP1-202ENST00000461433 CNTN5O94779 1100 aa11.64□□□□□ -0.55
SSBP1-202ENST00000461433 LRIG2O94898 1065 aa11.64□□□□□ -0.55
SSBP1-202ENST00000461433 MOCS3O95396 460 aa11.64□□□□□ -0.55
SSBP1-202ENST00000461433 CYBBP04839 570 aa11.64□□□□□ -0.55
SSBP1-202ENST00000461433 RARAP10276 462 aa11.64□□□□□ -0.55
SSBP1-202ENST00000461433 CD72P21854 359 aa11.64□□□□□ -0.55
SSBP1-202ENST00000461433 COMTP21964 271 aa11.64□□□□□ -0.55
SSBP1-202ENST00000461433 L1CAMP32004 1257 aa11.64□□□□□ -0.55
SSBP1-202ENST00000461433 SLC1A1P43005 524 aa11.64□□□□□ -0.55
SSBP1-202ENST00000461433 GALK1P51570 392 aa11.64□□□□□ -0.55
SSBP1-202ENST00000461433 PRKCQQ04759 706 aa11.64□□□□□ -0.55
SSBP1-202ENST00000461433 SIGLEC14Q08ET2 396 aa11.64□□□□□ -0.55
SSBP1-202ENST00000461433 SMTNL2Q2TAL5 461 aa11.64□□□□□ -0.55
SSBP1-202ENST00000461433 BOLA3Q53S33 107 aa11.64□□□□□ -0.55
SSBP1-202ENST00000461433 ALFQ53S48 1182 aa11.64□□□□□ -0.55
SSBP1-202ENST00000461433 EFHC2Q5JST6 749 aa11.64□□□□□ -0.55
SSBP1-202ENST00000461433 C11orf63Q6NUN7 778 aa11.64□□□□□ -0.55
SSBP1-202ENST00000461433 TRIM67Q6ZTA4 783 aa11.64□□□□□ -0.55
SSBP1-202ENST00000461433 TPRG1Q6ZUI0 275 aa11.64□□□□□ -0.55
SSBP1-202ENST00000461433 PSTKQ8IV42 348 aaKnown RBP11.64□□□□□ -0.55
SSBP1-202ENST00000461433 SIX5Q8N196 739 aa11.64□□□□□ -0.55
SSBP1-202ENST00000461433 TXLNBQ8N3L3 684 aa11.64□□□□□ -0.55
SSBP1-202ENST00000461433 HJURPQ8NCD3 748 aaPredicted RBP11.64□□□□□ -0.55
SSBP1-202ENST00000461433 WFDC5Q8TCV5 224 aa11.64□□□□□ -0.55
SSBP1-202ENST00000461433 LMLNQ96KR4 655 aa11.64□□□□□ -0.55
SSBP1-202ENST00000461433 CALR3Q96L12 384 aaKnown RBP11.64□□□□□ -0.55
SSBP1-202ENST00000461433 ZWILCHQ9H900 591 aa11.64□□□□□ -0.55
SSBP1-202ENST00000461433 ZNF212Q9UDV6 495 aa11.64□□□□□ -0.55
SSBP1-202ENST00000461433 FBXL21Q9UKT6 434 aa11.64□□□□□ -0.55
SSBP1-202ENST00000461433 TNFRSF10AO00220 468 aa11.63□□□□□ -0.55
SSBP1-202ENST00000461433 ALADP13716 330 aa11.63□□□□□ -0.55
SSBP1-202ENST00000461433 EIF2DP41214 584 aaKnown RBP11.63□□□□□ -0.55
SSBP1-202ENST00000461433 ARSEP51690 589 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms