RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 ELMO3Q96BJ8 720 aa17.97■□□□□ 0.47
TOP3A-202ENST00000461127 PLD4Q96BZ4 506 aa17.97■□□□□ 0.47
TOP3A-202ENST00000461127 NAF1Q96HR8 494 aaKnown RBP17.97■□□□□ 0.47
TOP3A-202ENST00000461127 PABPC3Q9H361 631 aaKnown RBP17.97■□□□□ 0.47
TOP3A-202ENST00000461127 GDPD2Q9HCC8 539 aa17.97■□□□□ 0.47
TOP3A-202ENST00000461127 ABCB8Q9NUT2 735 aa17.97■□□□□ 0.47
TOP3A-202ENST00000461127 ADAMTS1Q9UHI8 967 aa17.97■□□□□ 0.47
TOP3A-202ENST00000461127 A0A087X0B3 334 aa17.96■□□□□ 0.47
TOP3A-202ENST00000461127 C4BPAP04003 597 aaKnown RBP17.96■□□□□ 0.47
TOP3A-202ENST00000461127 WNT1P04628 370 aa17.96■□□□□ 0.47
TOP3A-202ENST00000461127 DLDP09622 509 aaKnown RBP17.96■□□□□ 0.47
TOP3A-202ENST00000461127 C6P13671 934 aa17.96■□□□□ 0.47
TOP3A-202ENST00000461127 HARS2P49590 506 aaKnown RBP17.96■□□□□ 0.47
TOP3A-202ENST00000461127 GALCP54803 685 aa17.96■□□□□ 0.47
TOP3A-202ENST00000461127 E2F1Q01094 437 aa17.96■□□□□ 0.47
TOP3A-202ENST00000461127 SLC39A14Q15043 492 aa17.96■□□□□ 0.47
TOP3A-202ENST00000461127 ARHGAP40Q5TG30 622 aa17.96■□□□□ 0.47
TOP3A-202ENST00000461127 NCEH1Q6PIU2 408 aa17.96■□□□□ 0.47
TOP3A-202ENST00000461127 C12orf56Q8IXR9 622 aa17.96■□□□□ 0.47
TOP3A-202ENST00000461127 FAM217AQ8IXS0 508 aa17.96■□□□□ 0.47
TOP3A-202ENST00000461127 DCBLD1Q8N8Z6 715 aa17.96■□□□□ 0.47
TOP3A-202ENST00000461127 PARD3BQ8TEW8 1205 aa17.96■□□□□ 0.47
TOP3A-202ENST00000461127 ZNF578Q96N58 590 aaPredicted RBP17.96■□□□□ 0.47
TOP3A-202ENST00000461127 NT5C1AQ9BXI3 368 aa17.96■□□□□ 0.47
TOP3A-202ENST00000461127 GGA2Q9UJY4 613 aa17.96■□□□□ 0.47
TOP3A-202ENST00000461127 RCOR1Q9UKL0 485 aa17.96■□□□□ 0.47
TOP3A-202ENST00000461127 USP3Q9Y6I4 520 aa17.96■□□□□ 0.47
TOP3A-202ENST00000461127 LRRIQ3A6PVS8 624 aaPredicted RBP17.95■□□□□ 0.46
TOP3A-202ENST00000461127 SPTLC2O15270 562 aa17.95■□□□□ 0.46
TOP3A-202ENST00000461127 VNN1O95497 513 aa17.95■□□□□ 0.46
TOP3A-202ENST00000461127 PABPC1P11940 636 aaKnown RBP17.95■□□□□ 0.46
TOP3A-202ENST00000461127 POLR2EP19388 210 aaKnown RBP17.95■□□□□ 0.46
TOP3A-202ENST00000461127 ME1P48163 572 aa17.95■□□□□ 0.46
TOP3A-202ENST00000461127 CLDN10P78369 228 aa17.95■□□□□ 0.46
TOP3A-202ENST00000461127 MBLAC2Q68D91 279 aa17.95■□□□□ 0.46
TOP3A-202ENST00000461127 KDM7AQ6ZMT4 941 aa17.95■□□□□ 0.46
TOP3A-202ENST00000461127 ADIPOR2Q86V24 386 aa17.95■□□□□ 0.46
TOP3A-202ENST00000461127 LSMEM2Q8N112 164 aa17.95■□□□□ 0.46
TOP3A-202ENST00000461127 LINC00301Q8NCQ3 95 aa17.95■□□□□ 0.46
TOP3A-202ENST00000461127 TMA16Q96EY4 203 aaKnown RBP17.95■□□□□ 0.46
TOP3A-202ENST00000461127 DUSP16Q9BY84 665 aa17.95■□□□□ 0.46
TOP3A-202ENST00000461127 RSPH9Q9H1X1 276 aaPredicted RBP17.95■□□□□ 0.46
TOP3A-202ENST00000461127 CUEDC2Q9H467 287 aa17.95■□□□□ 0.46
TOP3A-202ENST00000461127 ERVMER34-1Q9H9K5 563 aa17.95■□□□□ 0.46
TOP3A-202ENST00000461127 TPX2Q9ULW0 747 aaKnown RBP17.95■□□□□ 0.46
TOP3A-202ENST00000461127 GOLGA6L4A6NEF3 574 aa17.94■□□□□ 0.46
TOP3A-202ENST00000461127 TLR4O00206 839 aa17.94■□□□□ 0.46
TOP3A-202ENST00000461127 WISP1O95388 367 aa17.94■□□□□ 0.46
TOP3A-202ENST00000461127 PTMSP20962 102 aa17.94■□□□□ 0.46
TOP3A-202ENST00000461127 ASPAP45381 313 aa17.94■□□□□ 0.46
TOP3A-202ENST00000461127 RXRGP48443 463 aa17.94■□□□□ 0.46
TOP3A-202ENST00000461127 ST8SIA6P61647 398 aa17.94■□□□□ 0.46
TOP3A-202ENST00000461127 INSM1Q01101 510 aaPredicted RBP17.94■□□□□ 0.46
TOP3A-202ENST00000461127 SFMBT2Q5VUG0 894 aa17.94■□□□□ 0.46
TOP3A-202ENST00000461127 DHX40Q8IX18 779 aaKnown RBP17.94■□□□□ 0.46
TOP3A-202ENST00000461127 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.94■□□□□ 0.46
TOP3A-202ENST00000461127 OR2T34Q8NGX1 318 aa17.94■□□□□ 0.46
TOP3A-202ENST00000461127 GOLGA5Q8TBA6 731 aa17.94■□□□□ 0.46
TOP3A-202ENST00000461127 PLEKHO2Q8TD55 490 aa17.94■□□□□ 0.46
TOP3A-202ENST00000461127 SERAC1Q96JX3 654 aa17.94■□□□□ 0.46
TOP3A-202ENST00000461127 OMDQ99983 421 aa17.94■□□□□ 0.46
TOP3A-202ENST00000461127 IMPG2Q9BZV3 1241 aa17.94■□□□□ 0.46
TOP3A-202ENST00000461127 CPNE5Q9HCH3 593 aa17.94■□□□□ 0.46
TOP3A-202ENST00000461127 KBTBD4Q9NVX7 518 aa17.94■□□□□ 0.46
TOP3A-202ENST00000461127 ARID1BQ8NFD5 2236 aaPredicted RBP17.94■□□□□ 0.46
TOP3A-202ENST00000461127 SLC28A2O43868 658 aa17.93■□□□□ 0.46
TOP3A-202ENST00000461127 RNASEH2AO75792 299 aaKnown RBP17.93■□□□□ 0.46
TOP3A-202ENST00000461127 MT-CO3P00414 261 aa17.93■□□□□ 0.46
TOP3A-202ENST00000461127 ACP1P24666 158 aa17.93■□□□□ 0.46
TOP3A-202ENST00000461127 CCR5P51681 352 aa17.93■□□□□ 0.46
TOP3A-202ENST00000461127 NXPH1P58417 271 aa17.93■□□□□ 0.46
TOP3A-202ENST00000461127 YWHAGP61981 247 aaKnown RBP eCLIP17.93■□□□□ 0.46
TOP3A-202ENST00000461127 INCA1Q0VD86 236 aa17.93■□□□□ 0.46
TOP3A-202ENST00000461127 BNIP3Q12983 259 aa17.93■□□□□ 0.46
TOP3A-202ENST00000461127 LY6DQ14210 128 aa17.93■□□□□ 0.46
TOP3A-202ENST00000461127 HS1BP3Q53T59 392 aa17.93■□□□□ 0.46
TOP3A-202ENST00000461127 KIAA0907Q7Z7F0 614 aaPredicted RBP17.93■□□□□ 0.46
TOP3A-202ENST00000461127 ZNF557Q8N988 423 aaPredicted RBP17.93■□□□□ 0.46
TOP3A-202ENST00000461127 TWNKQ96RR1 684 aa17.93■□□□□ 0.46
TOP3A-202ENST00000461127 SEMA4CQ9C0C4 833 aa17.93■□□□□ 0.46
TOP3A-202ENST00000461127 EBF2Q9HAK2 575 aa17.93■□□□□ 0.46
TOP3A-202ENST00000461127 OLA1Q9NTK5 396 aaKnown RBP17.93■□□□□ 0.46
TOP3A-202ENST00000461127 FZD4Q9ULV1 537 aa17.93■□□□□ 0.46
TOP3A-202ENST00000461127 A0A1W2PP55 124 aa17.92■□□□□ 0.46
TOP3A-202ENST00000461127 A0A1W2PR77 199 aa17.92■□□□□ 0.46
TOP3A-202ENST00000461127 MAGEC1O60732 1142 aa17.92■□□□□ 0.46
TOP3A-202ENST00000461127 ASS1P00966 412 aaKnown RBP17.92■□□□□ 0.46
TOP3A-202ENST00000461127 SLFN14P0C7P3 912 aa17.92■□□□□ 0.46
TOP3A-202ENST00000461127 PIK3CAP42336 1068 aa17.92■□□□□ 0.46
TOP3A-202ENST00000461127 TRIP4Q15650 581 aaPredicted RBP17.92■□□□□ 0.46
TOP3A-202ENST00000461127 CST6Q15828 149 aa17.92■□□□□ 0.46
TOP3A-202ENST00000461127 KNOP1Q1ED39 458 aaKnown RBP17.92■□□□□ 0.46
TOP3A-202ENST00000461127 ZACNQ401N2 412 aa17.92■□□□□ 0.46
TOP3A-202ENST00000461127 SPOPLQ6IQ16 392 aa17.92■□□□□ 0.46
TOP3A-202ENST00000461127 KCNE4Q8WWG9 221 aa17.92■□□□□ 0.46
TOP3A-202ENST00000461127 HIC2Q96JB3 615 aa17.92■□□□□ 0.46
TOP3A-202ENST00000461127 NEUROG2Q9H2A3 272 aa17.92■□□□□ 0.46
TOP3A-202ENST00000461127 CYP3A43Q9HB55 503 aa17.92■□□□□ 0.46
TOP3A-202ENST00000461127 SERGEFQ9UGK8 458 aa17.92■□□□□ 0.46
TOP3A-202ENST00000461127 PYCARD-AS1I3L0S3 204 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms