RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 P2RY13Q9BPV8 354 aa23.25■■□□□ 1.31
C9orf3-209ENST00000460573 OSBPL6Q9BZF3 934 aa23.25■■□□□ 1.31
C9orf3-209ENST00000460573 XPO7Q9UIA9 1087 aaKnown RBP23.25■■□□□ 1.31
C9orf3-209ENST00000460573 ANAPC7Q9UJX3 599 aa23.25■■□□□ 1.31
C9orf3-209ENST00000460573 NDRG2Q9UN36 371 aaKnown RBP23.25■■□□□ 1.31
C9orf3-209ENST00000460573 GOLGA6L7A0A1B0GV03 622 aa23.24■■□□□ 1.31
C9orf3-209ENST00000460573 PRR23AA6NEV1 266 aa23.24■■□□□ 1.31
C9orf3-209ENST00000460573 F5H5T6 163 aa23.24■■□□□ 1.31
C9orf3-209ENST00000460573 NRDCO43847 1150 aa23.24■■□□□ 1.31
C9orf3-209ENST00000460573 CACNG3O60359 315 aa23.24■■□□□ 1.31
C9orf3-209ENST00000460573 SLC6A4P31645 630 aa23.24■■□□□ 1.31
C9orf3-209ENST00000460573 ADRA1BP35368 520 aa23.24■■□□□ 1.31
C9orf3-209ENST00000460573 KRT83P78385 493 aa23.24■■□□□ 1.31
C9orf3-209ENST00000460573 FYB2Q5VWT5 728 aa23.24■■□□□ 1.31
C9orf3-209ENST00000460573 ASCL5Q7RTU5 278 aa23.24■■□□□ 1.31
C9orf3-209ENST00000460573 TXLNBQ8N3L3 684 aa23.24■■□□□ 1.31
C9orf3-209ENST00000460573 NIPA2Q8N8Q9 360 aa23.24■■□□□ 1.31
C9orf3-209ENST00000460573 HJURPQ8NCD3 748 aaPredicted RBP23.24■■□□□ 1.31
C9orf3-209ENST00000460573 RFFLQ8WZ73 363 aa23.24■■□□□ 1.31
C9orf3-209ENST00000460573 CD101Q93033 1021 aa23.24■■□□□ 1.31
C9orf3-209ENST00000460573 CHFRQ96EP1 664 aa23.24■■□□□ 1.31
C9orf3-209ENST00000460573 PRMT1Q99873 361 aaKnown RBP23.24■■□□□ 1.31
C9orf3-209ENST00000460573 HINFPQ9BQA5 517 aa23.24■■□□□ 1.31
C9orf3-209ENST00000460573 SLC2A11Q9BYW1 496 aa23.24■■□□□ 1.31
C9orf3-209ENST00000460573 HS3ST4Q9Y661 456 aa23.24■■□□□ 1.31
C9orf3-209ENST00000460573 SHISA7A6NL88 538 aa23.23■■□□□ 1.31
C9orf3-209ENST00000460573 TSPAN3O60637 253 aa23.23■■□□□ 1.31
C9orf3-209ENST00000460573 OPRD1P41143 372 aa23.23■■□□□ 1.31
C9orf3-209ENST00000460573 GALK1P51570 392 aa23.23■■□□□ 1.31
C9orf3-209ENST00000460573 ZNF252P-AS1Q0IIN9 211 aa23.23■■□□□ 1.31
C9orf3-209ENST00000460573 TTC39BQ5VTQ0 682 aaPredicted RBP23.23■■□□□ 1.31
C9orf3-209ENST00000460573 RAP1GAP2Q684P5 730 aa23.23■■□□□ 1.31
C9orf3-209ENST00000460573 RFWD3Q6PCD5 774 aa23.23■■□□□ 1.31
C9orf3-209ENST00000460573 LRRC8AQ8IWT6 810 aa23.23■■□□□ 1.31
C9orf3-209ENST00000460573 ETFBKMTQ8IXQ9 262 aa23.23■■□□□ 1.31
C9orf3-209ENST00000460573 ZNF557Q8N988 423 aaPredicted RBP23.23■■□□□ 1.31
C9orf3-209ENST00000460573 SLC35G2Q8TBE7 412 aa23.23■■□□□ 1.31
C9orf3-209ENST00000460573 TRIM7Q9C029 511 aa23.23■■□□□ 1.31
C9orf3-209ENST00000460573 MTA2O94776 668 aa23.22■■□□□ 1.31
C9orf3-209ENST00000460573 PCK1P35558 622 aa23.22■■□□□ 1.31
C9orf3-209ENST00000460573 ARHGAP25P42331 645 aa23.22■■□□□ 1.31
C9orf3-209ENST00000460573 SCAPQ12770 1279 aa23.22■■□□□ 1.31
C9orf3-209ENST00000460573 GRSF1Q12849 480 aaKnown RBP eCLIP23.22■■□□□ 1.31
C9orf3-209ENST00000460573 PON2Q15165 354 aa23.22■■□□□ 1.31
C9orf3-209ENST00000460573 RAB6CQ53S08 254 aa23.22■■□□□ 1.31
C9orf3-209ENST00000460573 RABGAP1LQ5R372 815 aa23.22■■□□□ 1.31
C9orf3-209ENST00000460573 SCYL2Q6P3W7 929 aa23.22■■□□□ 1.31
C9orf3-209ENST00000460573 TXNDC11Q6PKC3 985 aa23.22■■□□□ 1.31
C9orf3-209ENST00000460573 NUDT18Q6ZVK8 323 aa23.22■■□□□ 1.31
C9orf3-209ENST00000460573 SLFN11Q7Z7L1 901 aa23.22■■□□□ 1.31
C9orf3-209ENST00000460573 LGI2Q8N0V4 545 aa23.22■■□□□ 1.31
C9orf3-209ENST00000460573 PNKPQ96T60 521 aa23.22■■□□□ 1.31
C9orf3-209ENST00000460573 SIK2Q9H0K1 926 aa23.22■■□□□ 1.31
C9orf3-209ENST00000460573 RAB6CQ9H0N0 254 aa23.22■■□□□ 1.31
C9orf3-209ENST00000460573 OSBPL2Q9H1P3 480 aa23.22■■□□□ 1.31
C9orf3-209ENST00000460573 DLGAP2Q9P1A6 1054 aa23.22■■□□□ 1.31
C9orf3-209ENST00000460573 DEC1Q9P2X7 70 aa23.22■■□□□ 1.31
C9orf3-209ENST00000460573 FBXO10Q9UK96 956 aa23.22■■□□□ 1.31
C9orf3-209ENST00000460573 MTF2Q9Y483 593 aaPredicted RBP23.22■■□□□ 1.31
C9orf3-209ENST00000460573 R4GN57 208 aa23.22■■□□□ 1.31
C9orf3-209ENST00000460573 COL4A3Q01955 1670 aa23.22■■□□□ 1.31
C9orf3-209ENST00000460573 ARHGAP6O43182 974 aa23.21■■□□□ 1.31
C9orf3-209ENST00000460573 DRD1P21728 446 aa23.21■■□□□ 1.31
C9orf3-209ENST00000460573 TARSP26639 723 aaKnown RBP23.21■■□□□ 1.31
C9orf3-209ENST00000460573 NRG1Q02297 640 aaPredicted RBP23.21■■□□□ 1.31
C9orf3-209ENST00000460573 AUHQ13825 339 aaKnown RBP23.21■■□□□ 1.31
C9orf3-209ENST00000460573 C5orf22Q49AR2 442 aa23.21■■□□□ 1.31
C9orf3-209ENST00000460573 TMEM196Q5HYL7 178 aa23.21■■□□□ 1.31
C9orf3-209ENST00000460573 RNF43Q68DV7 783 aa23.21■■□□□ 1.31
C9orf3-209ENST00000460573 LRRC31Q6UY01 552 aa23.21■■□□□ 1.31
C9orf3-209ENST00000460573 CCDC26Q8TAB7 109 aa23.21■■□□□ 1.31
C9orf3-209ENST00000460573 CALR3Q96L12 384 aaKnown RBP23.21■■□□□ 1.31
C9orf3-209ENST00000460573 SEMA4AQ9H3S1 761 aa23.21■■□□□ 1.31
C9orf3-209ENST00000460573 ANLNQ9NQW6 1124 aa23.21■■□□□ 1.31
C9orf3-209ENST00000460573 PLK2Q9NYY3 685 aa23.21■■□□□ 1.31
C9orf3-209ENST00000460573 A0A0A0MRY4 1105 aa23.2■■□□□ 1.3
C9orf3-209ENST00000460573 A0A0A6YYK5 440 aaPredicted RBP23.2■■□□□ 1.3
C9orf3-209ENST00000460573 I6L893 689 aaPredicted RBP23.2■■□□□ 1.3
C9orf3-209ENST00000460573 PRPSAP2O60256 369 aa23.2■■□□□ 1.3
C9orf3-209ENST00000460573 TBL1XO60907 577 aa23.2■■□□□ 1.3
C9orf3-209ENST00000460573 TULP3O75386 442 aa23.2■■□□□ 1.3
C9orf3-209ENST00000460573 SP9P0CG40 484 aa23.2■■□□□ 1.3
C9orf3-209ENST00000460573 HOXD9P28356 352 aaPredicted RBP23.2■■□□□ 1.3
C9orf3-209ENST00000460573 EFHC2Q5JST6 749 aa23.2■■□□□ 1.3
C9orf3-209ENST00000460573 DGKKQ5KSL6 1271 aa23.2■■□□□ 1.3
C9orf3-209ENST00000460573 FBXL22Q6P050 247 aa23.2■■□□□ 1.3
C9orf3-209ENST00000460573 CCDC117Q8IWD4 279 aaPredicted RBP23.2■■□□□ 1.3
C9orf3-209ENST00000460573 CCDC185Q8N715 623 aa23.2■■□□□ 1.3
C9orf3-209ENST00000460573 NAT16Q8N8M0 369 aa23.2■■□□□ 1.3
C9orf3-209ENST00000460573 PDLIM2Q96JY6 352 aa23.2■■□□□ 1.3
C9orf3-209ENST00000460573 PRICKLE1Q96MT3 831 aaPredicted RBP23.2■■□□□ 1.3
C9orf3-209ENST00000460573 DNAJC17Q9NVM6 304 aaKnown RBP23.2■■□□□ 1.3
C9orf3-209ENST00000460573 LRCH4O75427 683 aa23.19■■□□□ 1.3
C9orf3-209ENST00000460573 LMNAP02545 664 aaKnown RBP23.19■■□□□ 1.3
C9orf3-209ENST00000460573 GRIA2P42262 883 aa23.19■■□□□ 1.3
C9orf3-209ENST00000460573 SLC6A11P48066 632 aa23.19■■□□□ 1.3
C9orf3-209ENST00000460573 DGKGP49619 791 aa23.19■■□□□ 1.3
C9orf3-209ENST00000460573 VAV2P52735 878 aa23.19■■□□□ 1.3
C9orf3-209ENST00000460573 HADHBP55084 474 aaKnown RBP23.19■■□□□ 1.3
C9orf3-209ENST00000460573 CSTF1Q05048 431 aaKnown RBP23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms