RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 PEPDP12955 493 aa3.84□□□□□ -1.79
RFC4-211ENST00000460408 SFPQP23246 707 aaKnown RBP eCLIP3.84□□□□□ -1.79
RFC4-211ENST00000460408 CYP3A7P24462 503 aa3.84□□□□□ -1.79
RFC4-211ENST00000460408 AARSP49588 968 aaKnown RBP eCLIP3.84□□□□□ -1.79
RFC4-211ENST00000460408 PAPOLAP51003 745 aaKnown RBP3.84□□□□□ -1.79
RFC4-211ENST00000460408 PROK1P58294 105 aa3.84□□□□□ -1.79
RFC4-211ENST00000460408 TAS2R50P59544 299 aa3.84□□□□□ -1.79
RFC4-211ENST00000460408 WDR5P61964 334 aaKnown RBP3.84□□□□□ -1.79
RFC4-211ENST00000460408 HOXA4Q00056 320 aaPredicted RBP3.84□□□□□ -1.79
RFC4-211ENST00000460408 POU5F1BQ06416 359 aa3.84□□□□□ -1.79
RFC4-211ENST00000460408 CBFBQ13951 182 aa3.84□□□□□ -1.79
RFC4-211ENST00000460408 MFSD13AQ14CX5 517 aa3.84□□□□□ -1.79
RFC4-211ENST00000460408 FAM153CQ494X1 144 aa3.84□□□□□ -1.79
RFC4-211ENST00000460408 ALFQ53S48 1182 aa3.84□□□□□ -1.79
RFC4-211ENST00000460408 ZNF569Q5MCW4 686 aa3.84□□□□□ -1.79
RFC4-211ENST00000460408 TMEM63BQ5T3F8 832 aa3.84□□□□□ -1.79
RFC4-211ENST00000460408 ZNF425Q6IV72 752 aa3.84□□□□□ -1.79
RFC4-211ENST00000460408 KRTAP5-11Q6L8G4 156 aa3.84□□□□□ -1.79
RFC4-211ENST00000460408 ZNF788Q6ZQV5 615 aa3.84□□□□□ -1.79
RFC4-211ENST00000460408 SYT13Q7L8C5 426 aa3.84□□□□□ -1.79
RFC4-211ENST00000460408 ASB12Q8WXK4 309 aa3.84□□□□□ -1.79
RFC4-211ENST00000460408 USP13Q92995 863 aaPredicted RBP3.84□□□□□ -1.79
RFC4-211ENST00000460408 KTI12Q96EK9 354 aaPredicted RBP3.84□□□□□ -1.79
RFC4-211ENST00000460408 DAZAP1Q96EP5 407 aaKnown RBP3.84□□□□□ -1.79
RFC4-211ENST00000460408 TBATAQ96M53 351 aa3.84□□□□□ -1.79
RFC4-211ENST00000460408 TWNKQ96RR1 684 aa3.84□□□□□ -1.79
RFC4-211ENST00000460408 NPAS1Q99742 590 aa3.84□□□□□ -1.79
RFC4-211ENST00000460408 CPNE5Q9HCH3 593 aa3.84□□□□□ -1.79
RFC4-211ENST00000460408 ASB6Q9NWX5 421 aa3.84□□□□□ -1.79
RFC4-211ENST00000460408 ZNF70Q9UC06 446 aaPredicted RBP3.84□□□□□ -1.79
RFC4-211ENST00000460408 VPS4AQ9UN37 437 aa3.84□□□□□ -1.79
RFC4-211ENST00000460408 A0A1B0GVC2 190 aa3.83□□□□□ -1.8
RFC4-211ENST00000460408 WIPF3A6NGB9 483 aa3.83□□□□□ -1.8
RFC4-211ENST00000460408 RRN3P2A6NIE6 340 aa3.83□□□□□ -1.8
RFC4-211ENST00000460408 C16orf96A6NNT2 1141 aa3.83□□□□□ -1.8
RFC4-211ENST00000460408 BTBD19C9JJ37 291 aa3.83□□□□□ -1.8
RFC4-211ENST00000460408 EYA2O00167 538 aa3.83□□□□□ -1.8
RFC4-211ENST00000460408 CLIC1O00299 241 aa3.83□□□□□ -1.8
RFC4-211ENST00000460408 KRT38O76015 456 aa3.83□□□□□ -1.8
RFC4-211ENST00000460408 PYGLP06737 847 aa3.83□□□□□ -1.8
RFC4-211ENST00000460408 CNPP09543 421 aaKnown RBP3.83□□□□□ -1.8
RFC4-211ENST00000460408 NHLRC4P0CG21 123 aaPredicted RBP3.83□□□□□ -1.8
RFC4-211ENST00000460408 NDUFS1P28331 727 aa3.83□□□□□ -1.8
RFC4-211ENST00000460408 STAT6P42226 847 aa3.83□□□□□ -1.8
RFC4-211ENST00000460408 CCR5P51681 352 aa3.83□□□□□ -1.8
RFC4-211ENST00000460408 PDCLQ13371 301 aa3.83□□□□□ -1.8
RFC4-211ENST00000460408 KCNB1Q14721 858 aa3.83□□□□□ -1.8
RFC4-211ENST00000460408 MAP3K21Q5TCX8 1036 aa3.83□□□□□ -1.8
RFC4-211ENST00000460408 AMIGO2Q86SJ2 522 aa3.83□□□□□ -1.8
RFC4-211ENST00000460408 TMTC1Q8IUR5 882 aa3.83□□□□□ -1.8
RFC4-211ENST00000460408 TMEM57Q8N5G2 664 aa3.83□□□□□ -1.8
RFC4-211ENST00000460408 CLEC4CQ8WTT0 213 aa3.83□□□□□ -1.8
RFC4-211ENST00000460408 AKAP1Q92667 903 aaKnown RBP eCLIP3.83□□□□□ -1.8
RFC4-211ENST00000460408 GOLGA1Q92805 767 aa3.83□□□□□ -1.8
RFC4-211ENST00000460408 GATA5Q9BWX5 397 aaPredicted RBP3.83□□□□□ -1.8
RFC4-211ENST00000460408 RIC8AQ9NPQ8 531 aa3.83□□□□□ -1.8
RFC4-211ENST00000460408 TMLHEQ9NVH6 421 aa3.83□□□□□ -1.8
RFC4-211ENST00000460408 TMEM160Q9NX00 188 aa3.83□□□□□ -1.8
RFC4-211ENST00000460408 TFCP2L1Q9NZI6 479 aa3.83□□□□□ -1.8
RFC4-211ENST00000460408 SLC12A4Q9UP95 1085 aa3.83□□□□□ -1.8
RFC4-211ENST00000460408 DNAJC16Q9Y2G8 782 aa3.83□□□□□ -1.8
RFC4-211ENST00000460408 DERAQ9Y315 318 aa3.83□□□□□ -1.8
RFC4-211ENST00000460408 AOX1Q06278 1338 aa3.82□□□□□ -1.8
RFC4-211ENST00000460408 TBC1D3DA0A087WVF3 549 aa3.82□□□□□ -1.8
RFC4-211ENST00000460408 TBC1D3IA0A087WXS9 549 aa3.82□□□□□ -1.8
RFC4-211ENST00000460408 TBC1D3EA0A087X179 549 aa3.82□□□□□ -1.8
RFC4-211ENST00000460408 TBC1D3KA0A087X1G2 549 aa3.82□□□□□ -1.8
RFC4-211ENST00000460408 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.82□□□□□ -1.8
RFC4-211ENST00000460408 TBC1D3BA6NDS4 549 aa3.82□□□□□ -1.8
RFC4-211ENST00000460408 TBC1D3FA6NER0 549 aaPredicted RBP3.82□□□□□ -1.8
RFC4-211ENST00000460408 AGAP5A6NIR3 686 aa3.82□□□□□ -1.8
RFC4-211ENST00000460408 C3orf70A6NLC5 250 aaPredicted RBP3.82□□□□□ -1.8
RFC4-211ENST00000460408 TBC1D3LB9A6J9 549 aa3.82□□□□□ -1.8
RFC4-211ENST00000460408 AGR2O95994 175 aa3.82□□□□□ -1.8
RFC4-211ENST00000460408 POLBP06746 335 aa3.82□□□□□ -1.8
RFC4-211ENST00000460408 TBC1D3HP0C7X1 549 aa3.82□□□□□ -1.8
RFC4-211ENST00000460408 CYP2D6P10635 497 aa3.82□□□□□ -1.8
RFC4-211ENST00000460408 GPD1P21695 349 aa3.82□□□□□ -1.8
RFC4-211ENST00000460408 SLC8A1P32418 973 aa3.82□□□□□ -1.8
RFC4-211ENST00000460408 GRK5P34947 590 aa3.82□□□□□ -1.8
RFC4-211ENST00000460408 HOXD12P35452 270 aa3.82□□□□□ -1.8
RFC4-211ENST00000460408 AGTR2P50052 363 aa3.82□□□□□ -1.8
RFC4-211ENST00000460408 ZNF84P51523 738 aa3.82□□□□□ -1.8
RFC4-211ENST00000460408 RCAN1P53805 252 aa3.82□□□□□ -1.8
RFC4-211ENST00000460408 TFF2Q03403 129 aa3.82□□□□□ -1.8
RFC4-211ENST00000460408 TAF12Q16514 161 aa3.82□□□□□ -1.8
RFC4-211ENST00000460408 AWAT1Q58HT5 328 aa3.82□□□□□ -1.8
RFC4-211ENST00000460408 ZNF484Q5JVG2 852 aa3.82□□□□□ -1.8
RFC4-211ENST00000460408 ANKRD45Q5TZF3 282 aa3.82□□□□□ -1.8
RFC4-211ENST00000460408 TBC1D3GQ6DHY5 549 aa3.82□□□□□ -1.8
RFC4-211ENST00000460408 TBC1D3CQ6IPX1 549 aa3.82□□□□□ -1.8
RFC4-211ENST00000460408 WDR93Q6P2C0 686 aa3.82□□□□□ -1.8
RFC4-211ENST00000460408 KIAA1324Q6UXG2 1013 aaKnown RBP3.82□□□□□ -1.8
RFC4-211ENST00000460408 DCDC5Q6ZRR9 648 aa3.82□□□□□ -1.8
RFC4-211ENST00000460408 BBS12Q6ZW61 710 aa3.82□□□□□ -1.8
RFC4-211ENST00000460408 ADGRF3Q8IZF5 1079 aa3.82□□□□□ -1.8
RFC4-211ENST00000460408 TBC1D3Q8IZP1 549 aaPredicted RBP3.82□□□□□ -1.8
RFC4-211ENST00000460408 PTGR2Q8N8N7 351 aaPredicted RBP3.82□□□□□ -1.8
RFC4-211ENST00000460408 EXD3Q8N9H8 876 aa3.82□□□□□ -1.8
RFC4-211ENST00000460408 CEP70Q8NHQ1 597 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms