RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 TDRD12Q587J7 1177 aaKnown RBP16.71■□□□□ 0.27
CD28-203ENST00000458610 RNF43Q68DV7 783 aa16.71■□□□□ 0.27
CD28-203ENST00000458610 SPECC1LQ69YQ0 1117 aa16.71■□□□□ 0.27
CD28-203ENST00000458610 DNAJC24Q6P3W2 148 aa16.71■□□□□ 0.27
CD28-203ENST00000458610 MON1BQ7L1V2 547 aa16.71■□□□□ 0.27
CD28-203ENST00000458610 MCOLN2Q8IZK6 566 aa16.71■□□□□ 0.27
CD28-203ENST00000458610 CARNMT1Q8N4J0 409 aa16.71■□□□□ 0.27
CD28-203ENST00000458610 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.71■□□□□ 0.27
CD28-203ENST00000458610 RXFP2Q8WXD0 754 aa16.71■□□□□ 0.27
CD28-203ENST00000458610 TRIM11Q96F44 468 aa16.71■□□□□ 0.27
CD28-203ENST00000458610 C1orf74Q96LT6 269 aa16.71■□□□□ 0.27
CD28-203ENST00000458610 TBCBQ99426 244 aa16.71■□□□□ 0.27
CD28-203ENST00000458610 SYT11Q9BT88 431 aa16.71■□□□□ 0.27
CD28-203ENST00000458610 ANP32EQ9BTT0 268 aa16.71■□□□□ 0.27
CD28-203ENST00000458610 CIPCQ9C0C6 399 aa16.71■□□□□ 0.27
CD28-203ENST00000458610 TKTL2Q9H0I9 626 aa16.71■□□□□ 0.27
CD28-203ENST00000458610 PIGVQ9NUD9 493 aa16.71■□□□□ 0.27
CD28-203ENST00000458610 C2orf42Q9NWW7 574 aa16.71■□□□□ 0.27
CD28-203ENST00000458610 ARHGEF38Q9NXL2 777 aa16.71■□□□□ 0.27
CD28-203ENST00000458610 KIAA1522Q9P206 1035 aaPredicted RBP16.71■□□□□ 0.27
CD28-203ENST00000458610 GGA2Q9UJY4 613 aa16.71■□□□□ 0.27
CD28-203ENST00000458610 MYOFQ9NZM1 2061 aa16.71■□□□□ 0.27
CD28-203ENST00000458610 FAM170AA1A519 330 aa16.7■□□□□ 0.26
CD28-203ENST00000458610 C2CD4BA6NLJ0 364 aa16.7■□□□□ 0.26
CD28-203ENST00000458610 SGK1O00141 431 aa16.7■□□□□ 0.26
CD28-203ENST00000458610 RTN2O75298 545 aa16.7■□□□□ 0.26
CD28-203ENST00000458610 PAGE1O75459 146 aa16.7■□□□□ 0.26
CD28-203ENST00000458610 LUC7L3O95232 432 aaKnown RBP16.7■□□□□ 0.26
CD28-203ENST00000458610 HOXB2P14652 356 aa16.7■□□□□ 0.26
CD28-203ENST00000458610 POLR2EP19388 210 aaKnown RBP16.7■□□□□ 0.26
CD28-203ENST00000458610 GPD1P21695 349 aa16.7■□□□□ 0.26
CD28-203ENST00000458610 RPS24P62847 133 aaKnown RBP16.7■□□□□ 0.26
CD28-203ENST00000458610 SLC12A1Q13621 1099 aa16.7■□□□□ 0.26
CD28-203ENST00000458610 BYSLQ13895 437 aaKnown RBP16.7■□□□□ 0.26
CD28-203ENST00000458610 STARD3Q14849 445 aa16.7■□□□□ 0.26
CD28-203ENST00000458610 GEN1Q17RS7 908 aa16.7■□□□□ 0.26
CD28-203ENST00000458610 USP39Q53GS9 565 aaKnown RBP16.7■□□□□ 0.26
CD28-203ENST00000458610 DCUN1D2Q6PH85 259 aa16.7■□□□□ 0.26
CD28-203ENST00000458610 CHST9Q7L1S5 443 aa16.7■□□□□ 0.26
CD28-203ENST00000458610 STRADAQ7RTN6 431 aa16.7■□□□□ 0.26
CD28-203ENST00000458610 ZNF571Q7Z3V5 609 aaPredicted RBP16.7■□□□□ 0.26
CD28-203ENST00000458610 PHLDB2Q86SQ0 1253 aa16.7■□□□□ 0.26
CD28-203ENST00000458610 C11orf74Q86VG3 221 aa16.7■□□□□ 0.26
CD28-203ENST00000458610 SFTPA1Q8IWL2 248 aa16.7■□□□□ 0.26
CD28-203ENST00000458610 DRC7Q8IY82 874 aa16.7■□□□□ 0.26
CD28-203ENST00000458610 CFAP57Q96MR6 1250 aa16.7■□□□□ 0.26
CD28-203ENST00000458610 RPRD1AQ96P16 312 aaPredicted RBP16.7■□□□□ 0.26
CD28-203ENST00000458610 HHIPQ96QV1 700 aa16.7■□□□□ 0.26
CD28-203ENST00000458610 HAPLN3Q96S86 360 aa16.7■□□□□ 0.26
CD28-203ENST00000458610 PRMT1Q99873 361 aaKnown RBP16.7■□□□□ 0.26
CD28-203ENST00000458610 SIK2Q9H0K1 926 aa16.7■□□□□ 0.26
CD28-203ENST00000458610 ABCB8Q9NUT2 735 aa16.7■□□□□ 0.26
CD28-203ENST00000458610 PARVAQ9NVD7 372 aa16.7■□□□□ 0.26
CD28-203ENST00000458610 ZNHIT6Q9NWK9 470 aaKnown RBP16.7■□□□□ 0.26
CD28-203ENST00000458610 THAP10Q9P2Z0 257 aaPredicted RBP16.7■□□□□ 0.26
CD28-203ENST00000458610 XPO7Q9UIA9 1087 aaKnown RBP16.7■□□□□ 0.26
CD28-203ENST00000458610 CLEC4EQ9ULY5 219 aa16.7■□□□□ 0.26
CD28-203ENST00000458610 MYBL1P10243 752 aa16.69■□□□□ 0.26
CD28-203ENST00000458610 SKILP12757 684 aa16.69■□□□□ 0.26
CD28-203ENST00000458610 HLA-FP30511 346 aa16.69■□□□□ 0.26
CD28-203ENST00000458610 RFC1P35251 1148 aaPredicted RBP16.69■□□□□ 0.26
CD28-203ENST00000458610 MRE11P49959 708 aa16.69■□□□□ 0.26
CD28-203ENST00000458610 ATP11AP98196 1134 aa16.69■□□□□ 0.26
CD28-203ENST00000458610 AUHQ13825 339 aaKnown RBP16.69■□□□□ 0.26
CD28-203ENST00000458610 EGFLAMQ63HQ2 1017 aa16.69■□□□□ 0.26
CD28-203ENST00000458610 FBXL22Q6P050 247 aa16.69■□□□□ 0.26
CD28-203ENST00000458610 CEP68Q76N32 757 aa16.69■□□□□ 0.26
CD28-203ENST00000458610 KIAA0907Q7Z7F0 614 aaPredicted RBP16.69■□□□□ 0.26
CD28-203ENST00000458610 CFAP52Q8N1V2 620 aa16.69■□□□□ 0.26
CD28-203ENST00000458610 EMC1Q8N766 993 aa16.69■□□□□ 0.26
CD28-203ENST00000458610 P2RY11Q96G91 374 aa16.69■□□□□ 0.26
CD28-203ENST00000458610 PRICKLE1Q96MT3 831 aaPredicted RBP16.69■□□□□ 0.26
CD28-203ENST00000458610 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.69■□□□□ 0.26
CD28-203ENST00000458610 EPC1Q9H2F5 836 aa16.69■□□□□ 0.26
CD28-203ENST00000458610 BCCIPQ9P287 314 aaKnown RBP eCLIP16.69■□□□□ 0.26
CD28-203ENST00000458610 STON1Q9Y6Q2 735 aa16.69■□□□□ 0.26
CD28-203ENST00000458610 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.68■□□□□ 0.26
CD28-203ENST00000458610 A0A1B0GVM2 712 aa16.68■□□□□ 0.26
CD28-203ENST00000458610 TCAF2A6NFQ2 919 aa16.68■□□□□ 0.26
CD28-203ENST00000458610 TMCO5BA8MYB1 307 aa16.68■□□□□ 0.26
CD28-203ENST00000458610 SYNCRIPO60506 623 aaKnown RBP16.68■□□□□ 0.26
CD28-203ENST00000458610 GFRA3O60609 400 aa16.68■□□□□ 0.26
CD28-203ENST00000458610 ADAM23O75077 832 aa16.68■□□□□ 0.26
CD28-203ENST00000458610 CLDN11O75508 207 aa16.68■□□□□ 0.26
CD28-203ENST00000458610 RPP40O75818 363 aaKnown RBP16.68■□□□□ 0.26
CD28-203ENST00000458610 ADCY5O95622 1261 aa16.68■□□□□ 0.26
CD28-203ENST00000458610 FTLP02792 175 aaPredicted RBP16.68■□□□□ 0.26
CD28-203ENST00000458610 ASLP04424 464 aa16.68■□□□□ 0.26
CD28-203ENST00000458610 CHRM1P11229 460 aaPredicted RBP16.68■□□□□ 0.26
CD28-203ENST00000458610 CASP14P31944 242 aa16.68■□□□□ 0.26
CD28-203ENST00000458610 SGSHP51688 502 aa16.68■□□□□ 0.26
CD28-203ENST00000458610 ZNF177Q13360 481 aaPredicted RBP16.68■□□□□ 0.26
CD28-203ENST00000458610 SIM2Q14190 667 aaPredicted RBP16.68■□□□□ 0.26
CD28-203ENST00000458610 CCDC14Q49A88 953 aa16.68■□□□□ 0.26
CD28-203ENST00000458610 MBLAC2Q68D91 279 aa16.68■□□□□ 0.26
CD28-203ENST00000458610 ANO7Q6IWH7 933 aa16.68■□□□□ 0.26
CD28-203ENST00000458610 WDR59Q6PJI9 974 aa16.68■□□□□ 0.26
CD28-203ENST00000458610 TMEM92Q6UXU6 159 aa16.68■□□□□ 0.26
CD28-203ENST00000458610 BNIPLQ7Z465 357 aa16.68■□□□□ 0.26
CD28-203ENST00000458610 ALYREFQ86V81 257 aaKnown RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms