RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 ZNF132P52740 706 aa16.38■□□□□ 0.21
CHCHD3-204ENST00000457942 WDR45BQ5MNZ6 344 aa16.38■□□□□ 0.21
CHCHD3-204ENST00000457942 RFWD3Q6PCD5 774 aa16.38■□□□□ 0.21
CHCHD3-204ENST00000457942 TMPRSS6Q8IU80 811 aa16.38■□□□□ 0.21
CHCHD3-204ENST00000457942 CYB5D2Q8WUJ1 264 aa16.38■□□□□ 0.21
CHCHD3-204ENST00000457942 FOXJ1Q92949 421 aa16.38■□□□□ 0.21
CHCHD3-204ENST00000457942 COL26A1Q96A83 441 aa16.38■□□□□ 0.21
CHCHD3-204ENST00000457942 TOE1Q96GM8 510 aaKnown RBP16.38■□□□□ 0.21
CHCHD3-204ENST00000457942 KREMEN1Q96MU8 473 aa16.38■□□□□ 0.21
CHCHD3-204ENST00000457942 SERPINB11Q96P15 392 aa16.38■□□□□ 0.21
CHCHD3-204ENST00000457942 GPR174Q9BXC1 333 aa16.38■□□□□ 0.21
CHCHD3-204ENST00000457942 MKRN2Q9H000 416 aaKnown RBP16.38■□□□□ 0.21
CHCHD3-204ENST00000457942 UBE2TQ9NPD8 197 aaPredicted RBP16.38■□□□□ 0.21
CHCHD3-204ENST00000457942 ABCB8Q9NUT2 735 aa16.38■□□□□ 0.21
CHCHD3-204ENST00000457942 DNAAF2Q9NVR5 837 aaKnown RBP16.38■□□□□ 0.21
CHCHD3-204ENST00000457942 STIM2Q9P246 746 aa16.38■□□□□ 0.21
CHCHD3-204ENST00000457942 SUSD2Q9UGT4 822 aa16.38■□□□□ 0.21
CHCHD3-204ENST00000457942 GGA2Q9UJY4 613 aa16.38■□□□□ 0.21
CHCHD3-204ENST00000457942 PLA2G4CQ9UP65 541 aa16.38■□□□□ 0.21
CHCHD3-204ENST00000457942 GOLGA8CPA6NN73 597 aa16.37■□□□□ 0.21
CHCHD3-204ENST00000457942 CAPN9O14815 690 aa16.37■□□□□ 0.21
CHCHD3-204ENST00000457942 SART1O43290 800 aaKnown RBP16.37■□□□□ 0.21
CHCHD3-204ENST00000457942 THAP12O43422 761 aa16.37■□□□□ 0.21
CHCHD3-204ENST00000457942 MED7O43513 233 aa16.37■□□□□ 0.21
CHCHD3-204ENST00000457942 TIMM44O43615 452 aa16.37■□□□□ 0.21
CHCHD3-204ENST00000457942 TBL1XO60907 577 aa16.37■□□□□ 0.21
CHCHD3-204ENST00000457942 LETM1O95202 739 aaPredicted RBP16.37■□□□□ 0.21
CHCHD3-204ENST00000457942 SYPP08247 313 aa16.37■□□□□ 0.21
CHCHD3-204ENST00000457942 PABPC1P11940 636 aaKnown RBP16.37■□□□□ 0.21
CHCHD3-204ENST00000457942 HLA-EP13747 358 aa16.37■□□□□ 0.21
CHCHD3-204ENST00000457942 GNSP15586 552 aa16.37■□□□□ 0.21
CHCHD3-204ENST00000457942 HLA-FP30511 346 aa16.37■□□□□ 0.21
CHCHD3-204ENST00000457942 MARSP56192 900 aaKnown RBP16.37■□□□□ 0.21
CHCHD3-204ENST00000457942 GRIK2Q13002 908 aa16.37■□□□□ 0.21
CHCHD3-204ENST00000457942 CCDC117Q8IWD4 279 aaPredicted RBP16.37■□□□□ 0.21
CHCHD3-204ENST00000457942 AHI1Q8N157 1196 aa16.37■□□□□ 0.21
CHCHD3-204ENST00000457942 ADAMTS14Q8WXS8 1223 aa16.37■□□□□ 0.21
CHCHD3-204ENST00000457942 DDX50Q9BQ39 737 aaKnown RBP16.37■□□□□ 0.21
CHCHD3-204ENST00000457942 CRACR2AQ9BSW2 395 aa16.37■□□□□ 0.21
CHCHD3-204ENST00000457942 STOML2Q9UJZ1 356 aa16.37■□□□□ 0.21
CHCHD3-204ENST00000457942 PCNX2A6NKB5 2137 aa16.36■□□□□ 0.21
CHCHD3-204ENST00000457942 GOLGA6L7A0A1B0GV03 622 aa16.36■□□□□ 0.21
CHCHD3-204ENST00000457942 ACSL4O60488 711 aa16.36■□□□□ 0.21
CHCHD3-204ENST00000457942 MOCS2O96007 188 aaPredicted RBP16.36■□□□□ 0.21
CHCHD3-204ENST00000457942 OXTRP30559 389 aa16.36■□□□□ 0.21
CHCHD3-204ENST00000457942 GNA15P30679 374 aa16.36■□□□□ 0.21
CHCHD3-204ENST00000457942 ACADSBP45954 432 aa16.36■□□□□ 0.21
CHCHD3-204ENST00000457942 SGSHP51688 502 aa16.36■□□□□ 0.21
CHCHD3-204ENST00000457942 UBE2HP62256 183 aa16.36■□□□□ 0.21
CHCHD3-204ENST00000457942 ENPP2Q13822 863 aa16.36■□□□□ 0.21
CHCHD3-204ENST00000457942 TPD52L1Q16890 204 aaPredicted RBP16.36■□□□□ 0.21
CHCHD3-204ENST00000457942 TMEM215Q68D42 235 aa16.36■□□□□ 0.21
CHCHD3-204ENST00000457942 DENND1BQ6P3S1 775 aa16.36■□□□□ 0.21
CHCHD3-204ENST00000457942 CCNI2Q6ZMN8 369 aaPredicted RBP16.36■□□□□ 0.21
CHCHD3-204ENST00000457942 FAM124AQ86V42 546 aa16.36■□□□□ 0.21
CHCHD3-204ENST00000457942 MFN1Q8IWA4 741 aa16.36■□□□□ 0.21
CHCHD3-204ENST00000457942 SCUBE3Q8IX30 993 aa16.36■□□□□ 0.21
CHCHD3-204ENST00000457942 ZNF366Q8N895 744 aa16.36■□□□□ 0.21
CHCHD3-204ENST00000457942 HJURPQ8NCD3 748 aaPredicted RBP16.36■□□□□ 0.21
CHCHD3-204ENST00000457942 ADAM32Q8TC27 787 aa16.36■□□□□ 0.21
CHCHD3-204ENST00000457942 DQX1Q8TE96 717 aaKnown RBP16.36■□□□□ 0.21
CHCHD3-204ENST00000457942 TRIM62Q9BVG3 475 aa16.36■□□□□ 0.21
CHCHD3-204ENST00000457942 MIR1-1HGQ9H1L0 117 aa16.36■□□□□ 0.21
CHCHD3-204ENST00000457942 KIAA1468Q9P260 1216 aa16.36■□□□□ 0.21
CHCHD3-204ENST00000457942 USP36Q9P275 1121 aaKnown RBP16.36■□□□□ 0.21
CHCHD3-204ENST00000457942 RWDD2AQ9UIY3 292 aa16.36■□□□□ 0.21
CHCHD3-204ENST00000457942 IRAK2O43187 625 aa16.35■□□□□ 0.21
CHCHD3-204ENST00000457942 GJB3O75712 270 aa16.35■□□□□ 0.21
CHCHD3-204ENST00000457942 GABBR2O75899 941 aa16.35■□□□□ 0.21
CHCHD3-204ENST00000457942 IGLV3-27P01718 113 aa16.35■□□□□ 0.21
CHCHD3-204ENST00000457942 APOEP02649 317 aa16.35■□□□□ 0.21
CHCHD3-204ENST00000457942 PRB1P04280 392 aa16.35■□□□□ 0.21
CHCHD3-204ENST00000457942 ATP5BP06576 529 aaKnown RBP16.35■□□□□ 0.21
CHCHD3-204ENST00000457942 POLR2EP19388 210 aaKnown RBP16.35■□□□□ 0.21
CHCHD3-204ENST00000457942 TPMTP51580 245 aa16.35■□□□□ 0.21
CHCHD3-204ENST00000457942 ARHGAP44Q17R89 818 aa16.35■□□□□ 0.21
CHCHD3-204ENST00000457942 MBLAC2Q68D91 279 aa16.35■□□□□ 0.21
CHCHD3-204ENST00000457942 ENOSF1Q7L5Y1 443 aa16.35■□□□□ 0.21
CHCHD3-204ENST00000457942 METTL3Q86U44 580 aaKnown RBP16.35■□□□□ 0.21
CHCHD3-204ENST00000457942 SLCO6A1Q86UG4 719 aa16.35■□□□□ 0.21
CHCHD3-204ENST00000457942 ZCCHC9Q8N567 271 aaKnown RBP16.35■□□□□ 0.21
CHCHD3-204ENST00000457942 ZNF557Q8N988 423 aaPredicted RBP16.35■□□□□ 0.21
CHCHD3-204ENST00000457942 OR2T3Q8NH03 318 aa16.35■□□□□ 0.21
CHCHD3-204ENST00000457942 SETD7Q8WTS6 366 aaKnown RBP16.35■□□□□ 0.21
CHCHD3-204ENST00000457942 SNX19Q92543 992 aa16.35■□□□□ 0.21
CHCHD3-204ENST00000457942 ZNF419Q96HQ0 510 aaPredicted RBP16.35■□□□□ 0.21
CHCHD3-204ENST00000457942 LHX5Q9H2C1 402 aa16.35■□□□□ 0.21
CHCHD3-204ENST00000457942 IL21RQ9HBE5 538 aa16.35■□□□□ 0.21
CHCHD3-204ENST00000457942 ITM2CQ9NQX7 267 aa16.35■□□□□ 0.21
CHCHD3-204ENST00000457942 ASH1LQ9NR48 2969 aaKnown RBP16.35■□□□□ 0.21
CHCHD3-204ENST00000457942 WSB2Q9NYS7 404 aaPredicted RBP16.35■□□□□ 0.21
CHCHD3-204ENST00000457942 NAALADL1Q9UQQ1 740 aa16.35■□□□□ 0.21
CHCHD3-204ENST00000457942 MUC22E2RYF6 1773 aaPredicted RBP16.35■□□□□ 0.21
CHCHD3-204ENST00000457942 PLXNB3Q9ULL4 1909 aa16.35■□□□□ 0.21
CHCHD3-204ENST00000457942 SLC6A4P31645 630 aa16.34■□□□□ 0.21
CHCHD3-204ENST00000457942 CD70P32970 193 aa16.34■□□□□ 0.21
CHCHD3-204ENST00000457942 GPD2P43304 727 aa16.34■□□□□ 0.21
CHCHD3-204ENST00000457942 MTIF2P46199 727 aaKnown RBP16.34■□□□□ 0.21
CHCHD3-204ENST00000457942 COPAP53621 1224 aa16.34■□□□□ 0.21
CHCHD3-204ENST00000457942 CDH18Q13634 790 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms