RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 RHOBTB2Q9BYZ6 727 aa17.17■□□□□ 0.34
CCDC43-202ENST00000457422 IQCGQ9H095 443 aaKnown RBP17.17■□□□□ 0.34
CCDC43-202ENST00000457422 SEPT10Q9P0V9 454 aa17.17■□□□□ 0.34
CCDC43-202ENST00000457422 PLLPQ9Y342 182 aa17.17■□□□□ 0.34
CCDC43-202ENST00000457422 CENPFP49454 3210 aa17.17■□□□□ 0.34
CCDC43-202ENST00000457422 SDR42E2A6NKP2 422 aa17.16■□□□□ 0.34
CCDC43-202ENST00000457422 FAM72CH0Y354 149 aa17.16■□□□□ 0.34
CCDC43-202ENST00000457422 I3L4J1 428 aa17.16■□□□□ 0.34
CCDC43-202ENST00000457422 AMHP03971 560 aa17.16■□□□□ 0.34
CCDC43-202ENST00000457422 ERCC2P18074 760 aa17.16■□□□□ 0.34
CCDC43-202ENST00000457422 BMPR2Q13873 1038 aa17.16■□□□□ 0.34
CCDC43-202ENST00000457422 FAM72AQ5TYM5 149 aa17.16■□□□□ 0.34
CCDC43-202ENST00000457422 ICE2Q659A1 982 aa17.16■□□□□ 0.34
CCDC43-202ENST00000457422 FAM72DQ6L9T8 149 aa17.16■□□□□ 0.34
CCDC43-202ENST00000457422 MARK2Q7KZI7 788 aaKnown RBP17.16■□□□□ 0.34
CCDC43-202ENST00000457422 FAM72BQ86X60 149 aa17.16■□□□□ 0.34
CCDC43-202ENST00000457422 TP53INP2Q8IXH6 220 aa17.16■□□□□ 0.34
CCDC43-202ENST00000457422 ZNF567Q8N184 647 aa17.16■□□□□ 0.34
CCDC43-202ENST00000457422 PDCD7Q8N8D1 485 aaKnown RBP17.16■□□□□ 0.34
CCDC43-202ENST00000457422 IRGQQ8WZA9 623 aa17.16■□□□□ 0.34
CCDC43-202ENST00000457422 MYLPFQ96A32 169 aa17.16■□□□□ 0.34
CCDC43-202ENST00000457422 NAT9Q9BTE0 207 aa17.16■□□□□ 0.34
CCDC43-202ENST00000457422 TSSK1BQ9BXA7 367 aa17.16■□□□□ 0.34
CCDC43-202ENST00000457422 GABRQQ9UN88 632 aa17.16■□□□□ 0.34
CCDC43-202ENST00000457422 HMX2A2RU54 273 aa17.16■□□□□ 0.34
CCDC43-202ENST00000457422 I6L893 689 aaPredicted RBP17.16■□□□□ 0.34
CCDC43-202ENST00000457422 NCAM2O15394 837 aa17.16■□□□□ 0.34
CCDC43-202ENST00000457422 MGEA5O60502 916 aa17.16■□□□□ 0.34
CCDC43-202ENST00000457422 F9P00740 461 aa17.16■□□□□ 0.34
CCDC43-202ENST00000457422 CYP11A1P05108 521 aa17.16■□□□□ 0.34
CCDC43-202ENST00000457422 ODC1P11926 461 aa17.16■□□□□ 0.34
CCDC43-202ENST00000457422 NCAM1P13591 858 aa17.16■□□□□ 0.34
CCDC43-202ENST00000457422 PSMB4P28070 264 aa17.16■□□□□ 0.34
CCDC43-202ENST00000457422 CD52P31358 61 aa17.16■□□□□ 0.34
CCDC43-202ENST00000457422 MNAT1P51948 309 aa17.16■□□□□ 0.34
CCDC43-202ENST00000457422 NIPAL4Q0D2K0 466 aa17.16■□□□□ 0.34
CCDC43-202ENST00000457422 TRIM32Q13049 653 aa17.16■□□□□ 0.34
CCDC43-202ENST00000457422 NAB1Q13506 487 aa17.16■□□□□ 0.34
CCDC43-202ENST00000457422 INTS6LQ5JSJ4 861 aaKnown RBP17.16■□□□□ 0.34
CCDC43-202ENST00000457422 NLRP9Q7RTR0 991 aa17.16■□□□□ 0.34
CCDC43-202ENST00000457422 SCML4Q8N228 414 aa17.16■□□□□ 0.34
CCDC43-202ENST00000457422 CCNYQ8ND76 341 aa17.16■□□□□ 0.34
CCDC43-202ENST00000457422 RTP3Q9BQQ7 232 aa17.16■□□□□ 0.34
CCDC43-202ENST00000457422 BRD8Q9H0E9 1235 aa17.16■□□□□ 0.34
CCDC43-202ENST00000457422 NPHS2Q9NP85 383 aa17.16■□□□□ 0.34
CCDC43-202ENST00000457422 PTPRDP23468 1912 aa17.15■□□□□ 0.34
CCDC43-202ENST00000457422 PATJQ8NI35 1801 aa17.15■□□□□ 0.34
CCDC43-202ENST00000457422 WDR27A2RRH5 827 aa17.15■□□□□ 0.34
CCDC43-202ENST00000457422 ATP6V1G2O95670 118 aa17.15■□□□□ 0.34
CCDC43-202ENST00000457422 PGAM1P18669 254 aa17.15■□□□□ 0.34
CCDC43-202ENST00000457422 PAX3P23760 479 aa17.15■□□□□ 0.34
CCDC43-202ENST00000457422 THPOP40225 353 aa17.15■□□□□ 0.34
CCDC43-202ENST00000457422 TPI1P60174 286 aa17.15■□□□□ 0.34
CCDC43-202ENST00000457422 ARL13BQ3SXY8 428 aa17.15■□□□□ 0.34
CCDC43-202ENST00000457422 PAN2Q504Q3 1202 aaKnown RBP17.15■□□□□ 0.34
CCDC43-202ENST00000457422 PLEKHG4Q58EX7 1191 aa17.15■□□□□ 0.34
CCDC43-202ENST00000457422 FAM171BQ6P995 826 aa17.15■□□□□ 0.34
CCDC43-202ENST00000457422 DEPDC1BQ8WUY9 529 aa17.15■□□□□ 0.34
CCDC43-202ENST00000457422 ARNTL2Q8WYA1 636 aa17.15■□□□□ 0.34
CCDC43-202ENST00000457422 ACBD6Q9BR61 282 aa17.15■□□□□ 0.34
CCDC43-202ENST00000457422 SEPT4O43236 478 aa17.14■□□□□ 0.33
CCDC43-202ENST00000457422 ADAMTS4O75173 837 aa17.14■□□□□ 0.33
CCDC43-202ENST00000457422 POMCP01189 267 aa17.14■□□□□ 0.33
CCDC43-202ENST00000457422 PPIDQ08752 370 aaKnown RBP17.14■□□□□ 0.33
CCDC43-202ENST00000457422 DSC3Q14574 896 aa17.14■□□□□ 0.33
CCDC43-202ENST00000457422 PM20D1Q6GTS8 502 aa17.14■□□□□ 0.33
CCDC43-202ENST00000457422 TRIM42Q8IWZ5 723 aa17.14■□□□□ 0.33
CCDC43-202ENST00000457422 COLEC11Q9BWP8 271 aa17.14■□□□□ 0.33
CCDC43-202ENST00000457422 TRIM55Q9BYV6 548 aa17.14■□□□□ 0.33
CCDC43-202ENST00000457422 PIH1D1Q9NWS0 290 aaKnown RBP17.14■□□□□ 0.33
CCDC43-202ENST00000457422 DDIT4Q9NX09 232 aa17.14■□□□□ 0.33
CCDC43-202ENST00000457422 KANSL3Q9P2N6 904 aa17.14■□□□□ 0.33
CCDC43-202ENST00000457422 PADI3Q9ULW8 664 aa17.14■□□□□ 0.33
CCDC43-202ENST00000457422 CRHR1P34998 444 aa17.14■□□□□ 0.33
CCDC43-202ENST00000457422 CXCR3P49682 368 aa17.14■□□□□ 0.33
CCDC43-202ENST00000457422 CRADDP78560 199 aa17.14■□□□□ 0.33
CCDC43-202ENST00000457422 SREBF2Q12772 1141 aa17.14■□□□□ 0.33
CCDC43-202ENST00000457422 SWT1Q5T5J6 900 aaKnown RBP17.14■□□□□ 0.33
CCDC43-202ENST00000457422 CASC4Q6P4E1 433 aa17.14■□□□□ 0.33
CCDC43-202ENST00000457422 ZNF449Q6P9G9 518 aa17.14■□□□□ 0.33
CCDC43-202ENST00000457422 KIF2BQ8N4N8 673 aa17.14■□□□□ 0.33
CCDC43-202ENST00000457422 EDEM1Q92611 657 aa17.14■□□□□ 0.33
CCDC43-202ENST00000457422 LRMDAQ9H2I8 198 aa17.14■□□□□ 0.33
CCDC43-202ENST00000457422 TRIM33Q9UPN9 1127 aa17.14■□□□□ 0.33
CCDC43-202ENST00000457422 NLRC5Q86WI3 1866 aa17.14■□□□□ 0.33
CCDC43-202ENST00000457422 A0A0U1RQF3 1178 aa17.13■□□□□ 0.33
CCDC43-202ENST00000457422 FAM155AB1AL88 458 aaPredicted RBP17.13■□□□□ 0.33
CCDC43-202ENST00000457422 MYCNP04198 464 aaPredicted RBP17.13■□□□□ 0.33
CCDC43-202ENST00000457422 KRT16P08779 473 aa17.13■□□□□ 0.33
CCDC43-202ENST00000457422 BGNP21810 368 aa17.13■□□□□ 0.33
CCDC43-202ENST00000457422 PTPN3P26045 913 aa17.13■□□□□ 0.33
CCDC43-202ENST00000457422 MGAT1P26572 445 aa17.13■□□□□ 0.33
CCDC43-202ENST00000457422 BRCC3P46736 316 aa17.13■□□□□ 0.33
CCDC43-202ENST00000457422 FCGRTP55899 365 aa17.13■□□□□ 0.33
CCDC43-202ENST00000457422 SESN2P58004 480 aaPredicted RBP17.13■□□□□ 0.33
CCDC43-202ENST00000457422 OVGP1Q12889 678 aa17.13■□□□□ 0.33
CCDC43-202ENST00000457422 IFRD2Q12894 506 aaPredicted RBP17.13■□□□□ 0.33
CCDC43-202ENST00000457422 UNC5BQ8IZJ1 945 aa17.13■□□□□ 0.33
CCDC43-202ENST00000457422 RAB3IL1Q8TBN0 382 aa17.13■□□□□ 0.33
CCDC43-202ENST00000457422 ACMSDQ8TDX5 336 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms