RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 TCEAL6Q6IPX3 200 aa18.52■□□□□ 0.56
MSH6-207ENST00000456246 DPY19L2P1Q6NXN4 242 aa18.52■□□□□ 0.56
MSH6-207ENST00000456246 SASS6Q6UVJ0 657 aa18.52■□□□□ 0.56
MSH6-207ENST00000456246 SLC26A9Q7LBE3 791 aa18.52■□□□□ 0.56
MSH6-207ENST00000456246 FRMD1Q8N878 549 aa18.52■□□□□ 0.56
MSH6-207ENST00000456246 ANKRD20A12PQ8NF67 263 aa18.52■□□□□ 0.56
MSH6-207ENST00000456246 PRCCQ92733 491 aaPredicted RBP18.52■□□□□ 0.56
MSH6-207ENST00000456246 FOXJ1Q92949 421 aa18.52■□□□□ 0.56
MSH6-207ENST00000456246 TCEAL3Q969E4 200 aa18.52■□□□□ 0.56
MSH6-207ENST00000456246 NUSAP1Q9BXS6 441 aaKnown RBP18.52■□□□□ 0.56
MSH6-207ENST00000456246 PDCL3Q9H2J4 239 aa18.52■□□□□ 0.56
MSH6-207ENST00000456246 FAM204AQ9H8W3 233 aa18.52■□□□□ 0.56
MSH6-207ENST00000456246 PLCB1Q9NQ66 1216 aa18.52■□□□□ 0.56
MSH6-207ENST00000456246 RXFP3Q9NSD7 469 aa18.52■□□□□ 0.56
MSH6-207ENST00000456246 RRN3Q9NYV6 651 aa18.52■□□□□ 0.56
MSH6-207ENST00000456246 USP36Q9P275 1121 aaKnown RBP18.52■□□□□ 0.56
MSH6-207ENST00000456246 FHOD1Q9Y613 1164 aa18.52■□□□□ 0.56
MSH6-207ENST00000456246 ASLP04424 464 aa18.51■□□□□ 0.55
MSH6-207ENST00000456246 ABCB4P21439 1286 aa18.51■□□□□ 0.55
MSH6-207ENST00000456246 CD6P30203 668 aa18.51■□□□□ 0.55
MSH6-207ENST00000456246 CDH5P33151 784 aaPredicted RBP18.51■□□□□ 0.55
MSH6-207ENST00000456246 ZNF33AQ06730 810 aa18.51■□□□□ 0.55
MSH6-207ENST00000456246 EIF4EBP2Q13542 120 aaPredicted RBP18.51■□□□□ 0.55
MSH6-207ENST00000456246 CAMK2GQ13555 558 aaPredicted RBP18.51■□□□□ 0.55
MSH6-207ENST00000456246 ZC3H12AQ5D1E8 599 aaKnown RBP18.51■□□□□ 0.55
MSH6-207ENST00000456246 FKBP15Q5T1M5 1219 aa18.51■□□□□ 0.55
MSH6-207ENST00000456246 SYCP2LQ5T4T6 812 aa18.51■□□□□ 0.55
MSH6-207ENST00000456246 TTC39BQ5VTQ0 682 aaPredicted RBP18.51■□□□□ 0.55
MSH6-207ENST00000456246 CDKAL1Q5VV42 579 aa18.51■□□□□ 0.55
MSH6-207ENST00000456246 DAB2IPQ5VWQ8 1189 aa18.51■□□□□ 0.55
MSH6-207ENST00000456246 OR6B2Q6IFH4 312 aa18.51■□□□□ 0.55
MSH6-207ENST00000456246 OLFML1Q6UWY5 402 aa18.51■□□□□ 0.55
MSH6-207ENST00000456246 ARMCX6Q7L4S7 300 aa18.51■□□□□ 0.55
MSH6-207ENST00000456246 CHSY1Q86X52 802 aa18.51■□□□□ 0.55
MSH6-207ENST00000456246 TMPRSS6Q8IU80 811 aa18.51■□□□□ 0.55
MSH6-207ENST00000456246 DEFB106AQ8N104 65 aa18.51■□□□□ 0.55
MSH6-207ENST00000456246 MSANTD4Q8NCY6 345 aa18.51■□□□□ 0.55
MSH6-207ENST00000456246 ZNF397Q8NF99 534 aaPredicted RBP18.51■□□□□ 0.55
MSH6-207ENST00000456246 OR2T3Q8NH03 318 aa18.51■□□□□ 0.55
MSH6-207ENST00000456246 SORCS1Q8WY21 1168 aa18.51■□□□□ 0.55
MSH6-207ENST00000456246 SIPA1Q96FS4 1042 aa18.51■□□□□ 0.55
MSH6-207ENST00000456246 LSM14BQ9BX40 385 aaKnown RBP18.51■□□□□ 0.55
MSH6-207ENST00000456246 NAA15Q9BXJ9 866 aaKnown RBP18.51■□□□□ 0.55
MSH6-207ENST00000456246 STK33Q9BYT3 514 aa18.51■□□□□ 0.55
MSH6-207ENST00000456246 MKRN2Q9H000 416 aaKnown RBP18.51■□□□□ 0.55
MSH6-207ENST00000456246 NUCKS1Q9H1E3 243 aaKnown RBP18.51■□□□□ 0.55
MSH6-207ENST00000456246 TMEM245Q9H330 911 aa18.51■□□□□ 0.55
MSH6-207ENST00000456246 ITM2CQ9NQX7 267 aa18.51■□□□□ 0.55
MSH6-207ENST00000456246 DDIT4Q9NX09 232 aa18.51■□□□□ 0.55
MSH6-207ENST00000456246 TAB2Q9NYJ8 693 aa18.51■□□□□ 0.55
MSH6-207ENST00000456246 STIM2Q9P246 746 aa18.51■□□□□ 0.55
MSH6-207ENST00000456246 PILRBQ9UKJ0 227 aa18.51■□□□□ 0.55
MSH6-207ENST00000456246 KCNU1A8MYU2 1149 aa18.5■□□□□ 0.55
MSH6-207ENST00000456246 F5H5T6 163 aa18.5■□□□□ 0.55
MSH6-207ENST00000456246 DAB1O75553 588 aa18.5■□□□□ 0.55
MSH6-207ENST00000456246 LUC7L3O95232 432 aaKnown RBP18.5■□□□□ 0.55
MSH6-207ENST00000456246 MOCS3O95396 460 aa18.5■□□□□ 0.55
MSH6-207ENST00000456246 LSM8O95777 96 aaKnown RBP18.5■□□□□ 0.55
MSH6-207ENST00000456246 IGLV3-19P01714 112 aa18.5■□□□□ 0.55
MSH6-207ENST00000456246 C7P10643 843 aa18.5■□□□□ 0.55
MSH6-207ENST00000456246 ACADMP11310 421 aa18.5■□□□□ 0.55
MSH6-207ENST00000456246 CYP11B1P15538 503 aa18.5■□□□□ 0.55
MSH6-207ENST00000456246 CD70P32970 193 aa18.5■□□□□ 0.55
MSH6-207ENST00000456246 SCNN1AP37088 669 aa18.5■□□□□ 0.55
MSH6-207ENST00000456246 RPS24P62847 133 aaKnown RBP18.5■□□□□ 0.55
MSH6-207ENST00000456246 SLC6A3Q01959 620 aa18.5■□□□□ 0.55
MSH6-207ENST00000456246 STX1AQ16623 288 aa18.5■□□□□ 0.55
MSH6-207ENST00000456246 DUOXA1Q1HG43 343 aa18.5■□□□□ 0.55
MSH6-207ENST00000456246 PTPN20Q4JDL3 420 aa18.5■□□□□ 0.55
MSH6-207ENST00000456246 TRIM61Q5EBN2 209 aa18.5■□□□□ 0.55
MSH6-207ENST00000456246 PPM1JQ5JR12 505 aa18.5■□□□□ 0.55
MSH6-207ENST00000456246 SLC23A3Q6PIS1 610 aa18.5■□□□□ 0.55
MSH6-207ENST00000456246 FAM183BPQ6ZVS7 135 aa18.5■□□□□ 0.55
MSH6-207ENST00000456246 KDM1BQ8NB78 822 aa18.5■□□□□ 0.55
MSH6-207ENST00000456246 TTC17Q96AE7 1141 aa18.5■□□□□ 0.55
MSH6-207ENST00000456246 ZNF419Q96HQ0 510 aaPredicted RBP18.5■□□□□ 0.55
MSH6-207ENST00000456246 TMEM9BQ9NQ34 198 aa18.5■□□□□ 0.55
MSH6-207ENST00000456246 SUSD2Q9UGT4 822 aa18.5■□□□□ 0.55
MSH6-207ENST00000456246 SUN2Q9UH99 717 aa18.5■□□□□ 0.55
MSH6-207ENST00000456246 CEP192Q8TEP8 1941 aa18.5■□□□□ 0.55
MSH6-207ENST00000456246 MUC22E2RYF6 1773 aaPredicted RBP18.5■□□□□ 0.55
MSH6-207ENST00000456246 PI4KAP42356 2102 aa18.49■□□□□ 0.55
MSH6-207ENST00000456246 F8VZ95 297 aa18.49■□□□□ 0.55
MSH6-207ENST00000456246 TM4SF5O14894 197 aa18.49■□□□□ 0.55
MSH6-207ENST00000456246 ERBB2P04626 1255 aa18.49■□□□□ 0.55
MSH6-207ENST00000456246 PNMA6AP0CW24 399 aaPredicted RBP18.49■□□□□ 0.55
MSH6-207ENST00000456246 TACR2P21452 398 aa18.49■□□□□ 0.55
MSH6-207ENST00000456246 ITPKAP23677 461 aa18.49■□□□□ 0.55
MSH6-207ENST00000456246 NOS2P35228 1153 aa18.49■□□□□ 0.55
MSH6-207ENST00000456246 COPAP53621 1224 aa18.49■□□□□ 0.55
MSH6-207ENST00000456246 OXCT1P55809 520 aa18.49■□□□□ 0.55
MSH6-207ENST00000456246 ST8SIA6P61647 398 aa18.49■□□□□ 0.55
MSH6-207ENST00000456246 MYL5Q02045 173 aa18.49■□□□□ 0.55
MSH6-207ENST00000456246 ZBTB16Q05516 673 aa18.49■□□□□ 0.55
MSH6-207ENST00000456246 KRT31Q15323 416 aa18.49■□□□□ 0.55
MSH6-207ENST00000456246 TAF5Q15542 800 aa18.49■□□□□ 0.55
MSH6-207ENST00000456246 PTPRNQ16849 979 aa18.49■□□□□ 0.55
MSH6-207ENST00000456246 RABGAP1LQ5R372 815 aa18.49■□□□□ 0.55
MSH6-207ENST00000456246 RAP1GAP2Q684P5 730 aa18.49■□□□□ 0.55
MSH6-207ENST00000456246 ZNF677Q86XU0 584 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms