RNA–Protein interactions for RNA: ENST00000455954.2

CHCHD4P3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4 pseudogene 3, humanhuman

BASIC

Gene CHCHD4P3, Length 410 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4P3-201ENST00000455954 MCEEQ96PE7 176 aa10.33□□□□□ -0.76
CHCHD4P3-201ENST00000455954 THTPAQ9BU02 230 aa10.33□□□□□ -0.76
CHCHD4P3-201ENST00000455954 LHX5Q9H2C1 402 aa10.33□□□□□ -0.76
CHCHD4P3-201ENST00000455954 NKX2-4Q9H2Z4 354 aa10.33□□□□□ -0.76
CHCHD4P3-201ENST00000455954 RSAD1Q9HA92 442 aa10.33□□□□□ -0.76
CHCHD4P3-201ENST00000455954 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.33□□□□□ -0.76
CHCHD4P3-201ENST00000455954 METTL5Q9NRN9 209 aaKnown RBP10.33□□□□□ -0.76
CHCHD4P3-201ENST00000455954 AGO2Q9UKV8 859 aaKnown RBP10.33□□□□□ -0.76
CHCHD4P3-201ENST00000455954 PADI4Q9UM07 663 aa10.33□□□□□ -0.76
CHCHD4P3-201ENST00000455954 CHMP2BQ9UQN3 213 aa10.33□□□□□ -0.76
CHCHD4P3-201ENST00000455954 MAFBQ9Y5Q3 323 aaPredicted RBP10.33□□□□□ -0.76
CHCHD4P3-201ENST00000455954 COL1A2P08123 1366 aa10.32□□□□□ -0.76
CHCHD4P3-201ENST00000455954 A0A088AWK7 358 aa10.32□□□□□ -0.76
CHCHD4P3-201ENST00000455954 TTLL13PA6NNM8 815 aa10.32□□□□□ -0.76
CHCHD4P3-201ENST00000455954 ZNF487B1APH4 448 aa10.32□□□□□ -0.76
CHCHD4P3-201ENST00000455954 TRIM49D1C9J1S8 452 aa10.32□□□□□ -0.76
CHCHD4P3-201ENST00000455954 F8VP50 259 aa10.32□□□□□ -0.76
CHCHD4P3-201ENST00000455954 TMCC1O94876 653 aa10.32□□□□□ -0.76
CHCHD4P3-201ENST00000455954 UPP2O95045 317 aa10.32□□□□□ -0.76
CHCHD4P3-201ENST00000455954 STBD1O95210 358 aa10.32□□□□□ -0.76
CHCHD4P3-201ENST00000455954 ASS1P00966 412 aaKnown RBP10.32□□□□□ -0.76
CHCHD4P3-201ENST00000455954 CHRNA1P02708 482 aa10.32□□□□□ -0.76
CHCHD4P3-201ENST00000455954 CCDC130P13994 396 aa10.32□□□□□ -0.76
CHCHD4P3-201ENST00000455954 CPA3P15088 417 aa10.32□□□□□ -0.76
CHCHD4P3-201ENST00000455954 MYOGP15173 224 aa10.32□□□□□ -0.76
CHCHD4P3-201ENST00000455954 VAV1P15498 845 aa10.32□□□□□ -0.76
CHCHD4P3-201ENST00000455954 L1CAMP32004 1257 aa10.32□□□□□ -0.76
CHCHD4P3-201ENST00000455954 CHN2P52757 468 aa10.32□□□□□ -0.76
CHCHD4P3-201ENST00000455954 EIF3EP60228 445 aaKnown RBP10.32□□□□□ -0.76
CHCHD4P3-201ENST00000455954 YWHAGP61981 247 aaKnown RBP eCLIP10.32□□□□□ -0.76
CHCHD4P3-201ENST00000455954 ROR1Q01973 937 aa10.32□□□□□ -0.76
CHCHD4P3-201ENST00000455954 OGDHQ02218 1023 aa10.32□□□□□ -0.76
CHCHD4P3-201ENST00000455954 TCTN1Q2MV58 587 aa10.32□□□□□ -0.76
CHCHD4P3-201ENST00000455954 KBTBD12Q3ZCT8 623 aa10.32□□□□□ -0.76
CHCHD4P3-201ENST00000455954 HSP90AA5PQ58FG0 334 aa10.32□□□□□ -0.76
CHCHD4P3-201ENST00000455954 ZNF484Q5JVG2 852 aa10.32□□□□□ -0.76
CHCHD4P3-201ENST00000455954 HP1BP3Q5SSJ5 553 aaPredicted RBP10.32□□□□□ -0.76
CHCHD4P3-201ENST00000455954 IER5Q5VY09 327 aa10.32□□□□□ -0.76
CHCHD4P3-201ENST00000455954 BORAQ6PGQ7 559 aa10.32□□□□□ -0.76
CHCHD4P3-201ENST00000455954 ANO5Q75V66 913 aa10.32□□□□□ -0.76
CHCHD4P3-201ENST00000455954 TAS1R3Q7RTX0 852 aa10.32□□□□□ -0.76
CHCHD4P3-201ENST00000455954 ALYREFQ86V81 257 aaKnown RBP10.32□□□□□ -0.76
CHCHD4P3-201ENST00000455954 RASSF3Q86WH2 238 aa10.32□□□□□ -0.76
CHCHD4P3-201ENST00000455954 NUDCD3Q8IVD9 361 aa10.32□□□□□ -0.76
CHCHD4P3-201ENST00000455954 ARID3BQ8IVW6 561 aaPredicted RBP10.32□□□□□ -0.76
CHCHD4P3-201ENST00000455954 RBM12BQ8IXT5 1001 aaKnown RBP10.32□□□□□ -0.76
CHCHD4P3-201ENST00000455954 MARVELD2Q8N4S9 558 aa10.32□□□□□ -0.76
CHCHD4P3-201ENST00000455954 TRAPPC12Q8WVT3 735 aa10.32□□□□□ -0.76
CHCHD4P3-201ENST00000455954 MYLIPQ8WY64 445 aa10.32□□□□□ -0.76
CHCHD4P3-201ENST00000455954 MRRFQ96E11 262 aaKnown RBP10.32□□□□□ -0.76
CHCHD4P3-201ENST00000455954 ACAP3Q96P50 834 aa10.32□□□□□ -0.76
CHCHD4P3-201ENST00000455954 GCOM2Q9BZD3 368 aaPredicted RBP10.32□□□□□ -0.76
CHCHD4P3-201ENST00000455954 TMEM134Q9H6X4 195 aa10.32□□□□□ -0.76
CHCHD4P3-201ENST00000455954 KLHL11Q9NVR0 708 aa10.32□□□□□ -0.76
CHCHD4P3-201ENST00000455954 DNAJC28Q9NX36 388 aa10.32□□□□□ -0.76
CHCHD4P3-201ENST00000455954 RBAKQ9NYW8 714 aaPredicted RBP10.32□□□□□ -0.76
CHCHD4P3-201ENST00000455954 C6orf203Q9P0P8 240 aaPredicted RBP10.32□□□□□ -0.76
CHCHD4P3-201ENST00000455954 THEGQ9P2T0 379 aa10.32□□□□□ -0.76
CHCHD4P3-201ENST00000455954 GABBR1Q9UBS5 961 aa10.32□□□□□ -0.76
CHCHD4P3-201ENST00000455954 BCAP29Q9UHQ4 241 aa10.32□□□□□ -0.76
CHCHD4P3-201ENST00000455954 SF3B1O75533 1304 aaKnown RBP eCLIP10.32□□□□□ -0.76
CHCHD4P3-201ENST00000455954 SMIM35A0A1B0GVV1 85 aa10.31□□□□□ -0.76
CHCHD4P3-201ENST00000455954 GOLGA8SH3BPF8 625 aa10.31□□□□□ -0.76
CHCHD4P3-201ENST00000455954 GOLGA8MH3BSY2 632 aa10.31□□□□□ -0.76
CHCHD4P3-201ENST00000455954 GOLGA8RI6L899 631 aa10.31□□□□□ -0.76
CHCHD4P3-201ENST00000455954 MED7O43513 233 aa10.31□□□□□ -0.76
CHCHD4P3-201ENST00000455954 DENRO43583 198 aaKnown RBP10.31□□□□□ -0.76
CHCHD4P3-201ENST00000455954 RNASEH1O60930 286 aaKnown RBP10.31□□□□□ -0.76
CHCHD4P3-201ENST00000455954 BANF1O75531 89 aa10.31□□□□□ -0.76
CHCHD4P3-201ENST00000455954 RFPL1O75677 317 aa10.31□□□□□ -0.76
CHCHD4P3-201ENST00000455954 ENDOD1O94919 500 aa10.31□□□□□ -0.76
CHCHD4P3-201ENST00000455954 CALCAP01258 141 aa10.31□□□□□ -0.76
CHCHD4P3-201ENST00000455954 AMHP03971 560 aa10.31□□□□□ -0.76
CHCHD4P3-201ENST00000455954 CCDC166P0CW27 439 aa10.31□□□□□ -0.76
CHCHD4P3-201ENST00000455954 FOSL2P15408 326 aa10.31□□□□□ -0.76
CHCHD4P3-201ENST00000455954 PSMA2P25787 234 aa10.31□□□□□ -0.76
CHCHD4P3-201ENST00000455954 NAMPTP43490 491 aa10.31□□□□□ -0.76
CHCHD4P3-201ENST00000455954 GABRB2P47870 512 aa10.31□□□□□ -0.76
CHCHD4P3-201ENST00000455954 HSPA13P48723 471 aa10.31□□□□□ -0.76
CHCHD4P3-201ENST00000455954 GDF10P55107 478 aa10.31□□□□□ -0.76
CHCHD4P3-201ENST00000455954 MRPS6P82932 125 aaKnown RBP10.31□□□□□ -0.76
CHCHD4P3-201ENST00000455954 CREB5Q02930 508 aa10.31□□□□□ -0.76
CHCHD4P3-201ENST00000455954 MGAT3Q09327 533 aa10.31□□□□□ -0.76
CHCHD4P3-201ENST00000455954 STX3Q13277 289 aa10.31□□□□□ -0.76
CHCHD4P3-201ENST00000455954 NCOA4Q13772 614 aa10.31□□□□□ -0.76
CHCHD4P3-201ENST00000455954 CHI3L2Q15782 390 aa10.31□□□□□ -0.76
CHCHD4P3-201ENST00000455954 TBC1D25Q3MII6 688 aa10.31□□□□□ -0.76
CHCHD4P3-201ENST00000455954 RABGAP1LQ5R372 815 aa10.31□□□□□ -0.76
CHCHD4P3-201ENST00000455954 PPP2R2DQ66LE6 453 aa10.31□□□□□ -0.76
CHCHD4P3-201ENST00000455954 SPATA24Q86W54 205 aa10.31□□□□□ -0.76
CHCHD4P3-201ENST00000455954 RFX6Q8HWS3 928 aa10.31□□□□□ -0.76
CHCHD4P3-201ENST00000455954 WDR49Q8IV35 697 aa10.31□□□□□ -0.76
CHCHD4P3-201ENST00000455954 BRSK2Q8IWQ3 736 aa10.31□□□□□ -0.76
CHCHD4P3-201ENST00000455954 SLC4A11Q8NBS3 891 aa10.31□□□□□ -0.76
CHCHD4P3-201ENST00000455954 DDI1Q8WTU0 396 aa10.31□□□□□ -0.76
CHCHD4P3-201ENST00000455954 DGCR14Q96DF8 476 aaKnown RBP10.31□□□□□ -0.76
CHCHD4P3-201ENST00000455954 CMTM5Q96DZ9 223 aa10.31□□□□□ -0.76
CHCHD4P3-201ENST00000455954 CEP170P1Q96L14 293 aa10.31□□□□□ -0.76
CHCHD4P3-201ENST00000455954 KCNK16Q96T55 309 aa10.31□□□□□ -0.76
CHCHD4P3-201ENST00000455954 ZBED2Q9BTP6 218 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms