RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 BHLHE22Q8NFJ8 381 aaPredicted RBP5.33□□□□□ -1.56
CSMD3-204ENST00000455883 TFB1MQ8WVM0 346 aaKnown RBP5.33□□□□□ -1.56
CSMD3-204ENST00000455883 ROPN1LQ96C74 230 aa5.33□□□□□ -1.56
CSMD3-204ENST00000455883 OXCT2Q9BYC2 517 aaPredicted RBP5.33□□□□□ -1.56
CSMD3-204ENST00000455883 SLC6A15Q9H2J7 730 aa5.33□□□□□ -1.56
CSMD3-204ENST00000455883 NANSQ9NR45 359 aa5.33□□□□□ -1.56
CSMD3-204ENST00000455883 ZNF112Q9UJU3 913 aa5.33□□□□□ -1.56
CSMD3-204ENST00000455883 ISPDA4D126 451 aa5.33□□□□□ -1.56
CSMD3-204ENST00000455883 SPDYE5A6NIY4 337 aa5.33□□□□□ -1.56
CSMD3-204ENST00000455883 TPP2P29144 1249 aaPredicted RBP5.33□□□□□ -1.56
CSMD3-204ENST00000455883 ADSSP30520 456 aa5.33□□□□□ -1.56
CSMD3-204ENST00000455883 SPDYE7PQ495Y7 208 aa5.33□□□□□ -1.56
CSMD3-204ENST00000455883 EPC2Q52LR7 807 aa5.33□□□□□ -1.56
CSMD3-204ENST00000455883 SBK1Q52WX2 424 aa5.33□□□□□ -1.56
CSMD3-204ENST00000455883 SPANXN3Q5MJ09 141 aa5.33□□□□□ -1.56
CSMD3-204ENST00000455883 PLCZ1Q86YW0 608 aa5.33□□□□□ -1.56
CSMD3-204ENST00000455883 OR52L1Q8NGH7 329 aa5.33□□□□□ -1.56
CSMD3-204ENST00000455883 NSMCE2Q96MF7 247 aa5.33□□□□□ -1.56
CSMD3-204ENST00000455883 RBAKQ9NYW8 714 aaPredicted RBP5.33□□□□□ -1.56
CSMD3-204ENST00000455883 KCNJ14Q9UNX9 436 aa5.33□□□□□ -1.56
CSMD3-204ENST00000455883 ACOT9Q9Y305 439 aa5.33□□□□□ -1.56
CSMD3-204ENST00000455883 ATAD5Q96QE3 1844 aa5.33□□□□□ -1.56
CSMD3-204ENST00000455883 ASB14A6NK59 587 aa5.33□□□□□ -1.56
CSMD3-204ENST00000455883 MYCLP12524 364 aaPredicted RBP5.33□□□□□ -1.56
CSMD3-204ENST00000455883 CACNA2D1P54289 1103 aa5.33□□□□□ -1.56
CSMD3-204ENST00000455883 BMT2Q1RMZ1 405 aa5.33□□□□□ -1.56
CSMD3-204ENST00000455883 PYHIN1Q6K0P9 492 aa5.33□□□□□ -1.56
CSMD3-204ENST00000455883 DHDDSQ86SQ9 333 aa5.33□□□□□ -1.56
CSMD3-204ENST00000455883 TPCN2Q8NHX9 752 aa5.33□□□□□ -1.56
CSMD3-204ENST00000455883 CINPQ9BW66 212 aaPredicted RBP5.33□□□□□ -1.56
CSMD3-204ENST00000455883 UBR2Q8IWV8 1755 aa5.33□□□□□ -1.56
CSMD3-204ENST00000455883 ORC5O43913 435 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 ENTPD5O75356 428 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 CLTBP09497 229 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 MLH1P40692 756 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 CCT3P49368 545 aaKnown RBP5.32□□□□□ -1.56
CSMD3-204ENST00000455883 TXNL4AP83876 142 aaKnown RBP5.32□□□□□ -1.56
CSMD3-204ENST00000455883 EXOSC10Q01780 885 aaKnown RBP5.32□□□□□ -1.56
CSMD3-204ENST00000455883 SMARCB1Q12824 385 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 CCDC85BQ15834 202 aaPredicted RBP5.32□□□□□ -1.56
CSMD3-204ENST00000455883 SV2CQ496J9 727 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 BAIAP2L2Q6UXY1 529 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 DHFR2Q86XF0 187 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 NELFCDQ8IXH7 590 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 KATNAL2Q8IYT4 538 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 TCAIMQ8N3R3 496 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 SVOPLQ8N434 492 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 LATS2Q9NRM7 1088 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 PRKAG2Q9UGJ0 569 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.32□□□□□ -1.56
CSMD3-204ENST00000455883 A0A1W2PRG6 482 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 SMIM22K7EJ46 135 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 SLCO1A2P46721 670 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 ELP6Q0PNE2 266 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 DPYDQ12882 1025 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 SLC29A2Q14542 456 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 NFE2Q16621 373 aaPredicted RBP5.32□□□□□ -1.56
CSMD3-204ENST00000455883 CCDC184Q52MB2 194 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 FAM102AQ5T9C2 384 aaPredicted RBP5.32□□□□□ -1.56
CSMD3-204ENST00000455883 ZCCHC12Q6PEW1 402 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 LINC00299Q6ZSB3 139 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 STRADAQ7RTN6 431 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 FAM220AQ7Z4H9 259 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 SULF1Q8IWU6 871 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 RAPGEF5Q92565 580 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 RBM4BQ9BQ04 359 aaKnown RBP5.32□□□□□ -1.56
CSMD3-204ENST00000455883 RBM4Q9BWF3 364 aaKnown RBP5.32□□□□□ -1.56
CSMD3-204ENST00000455883 INTS2Q9H0H0 1204 aaKnown RBP5.32□□□□□ -1.56
CSMD3-204ENST00000455883 IL1RAPQ9NPH3 570 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 PDGFCQ9NRA1 345 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 DOCK6Q96HP0 2047 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 TUBGCP6Q96RT7 1819 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 ATG2BQ96BY7 2078 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 RRN3P2A6NIE6 340 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 M0R2C6 588 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 IFNA16P05015 189 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 GPC3P51654 580 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 Q4G0T1 1027 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 AVL9Q8NBF6 648 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 GLB1L3Q8NCI6 653 aaPredicted RBP5.32□□□□□ -1.56
CSMD3-204ENST00000455883 UCMAQ8WVF2 138 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 ZCWPW1Q9H0M4 648 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 NAGPAQ9UK23 515 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 ERCC6L2Q5T890 1561 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 UBR1Q8IWV7 1749 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 ARFGEF2Q9Y6D5 1785 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 A0A1W2PQ72 361 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 ADAMDEC1O15204 470 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 GSTT1P30711 240 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 GTF2IP78347 998 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 KLHL26Q53HC5 615 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 XKR3Q5GH77 459 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 ZNF438Q7Z4V0 828 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 SLC9A8Q9Y2E8 581 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 GDAQ9Y2T3 454 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 SNX24Q9Y343 169 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 CNPP09543 421 aaKnown RBP5.32□□□□□ -1.56
CSMD3-204ENST00000455883 SAT1P21673 171 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 SQLEQ14534 574 aa5.32□□□□□ -1.56
CSMD3-204ENST00000455883 RASA2Q15283 850 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms