RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 TLK1Q9UKI8 766 aa12.31□□□□□ -0.44
SMPD4-213ENST00000454468 EFR3BQ9Y2G0 817 aa12.31□□□□□ -0.44
SMPD4-213ENST00000454468 ACTL7BQ9Y614 415 aa12.31□□□□□ -0.44
SMPD4-213ENST00000454468 SCN1AP35498 2009 aa12.31□□□□□ -0.44
SMPD4-213ENST00000454468 SMIM35A0A1B0GVV1 85 aa12.3□□□□□ -0.44
SMPD4-213ENST00000454468 GOLGA8CPA6NN73 597 aa12.3□□□□□ -0.44
SMPD4-213ENST00000454468 CFLARO15519 480 aa12.3□□□□□ -0.44
SMPD4-213ENST00000454468 UPP2O95045 317 aa12.3□□□□□ -0.44
SMPD4-213ENST00000454468 UNC5CO95185 931 aa12.3□□□□□ -0.44
SMPD4-213ENST00000454468 POLBP06746 335 aa12.3□□□□□ -0.44
SMPD4-213ENST00000454468 RGS2P41220 211 aa12.3□□□□□ -0.44
SMPD4-213ENST00000454468 SLC12A2P55011 1212 aa12.3□□□□□ -0.44
SMPD4-213ENST00000454468 SLC26A9Q7LBE3 791 aa12.3□□□□□ -0.44
SMPD4-213ENST00000454468 PNPLA1Q8N8W4 532 aa12.3□□□□□ -0.44
SMPD4-213ENST00000454468 FBXO41Q8TF61 875 aa12.3□□□□□ -0.44
SMPD4-213ENST00000454468 KBTBD7Q8WVZ9 684 aa12.3□□□□□ -0.44
SMPD4-213ENST00000454468 EPAS1Q99814 870 aa12.3□□□□□ -0.44
SMPD4-213ENST00000454468 FSD1LQ9BXM9 530 aa12.3□□□□□ -0.44
SMPD4-213ENST00000454468 FRMD8P1Q9BZ68 369 aaPredicted RBP12.3□□□□□ -0.44
SMPD4-213ENST00000454468 TSR3Q9UJK0 312 aaKnown RBP12.3□□□□□ -0.44
SMPD4-213ENST00000454468 DNAJC16Q9Y2G8 782 aa12.3□□□□□ -0.44
SMPD4-213ENST00000454468 F8W810 466 aa12.3□□□□□ -0.44
SMPD4-213ENST00000454468 FCHO1O14526 889 aa12.3□□□□□ -0.44
SMPD4-213ENST00000454468 LTFP02788 710 aa12.3□□□□□ -0.44
SMPD4-213ENST00000454468 NOS2P35228 1153 aa12.3□□□□□ -0.44
SMPD4-213ENST00000454468 BNIP1Q12981 228 aa12.3□□□□□ -0.44
SMPD4-213ENST00000454468 ITGA9Q13797 1035 aa12.3□□□□□ -0.44
SMPD4-213ENST00000454468 RASA2Q15283 850 aa12.3□□□□□ -0.44
SMPD4-213ENST00000454468 DLG2Q15700 870 aa12.3□□□□□ -0.44
SMPD4-213ENST00000454468 LACTB2Q53H82 288 aaPredicted RBP12.3□□□□□ -0.44
SMPD4-213ENST00000454468 FASTKD1Q53R41 847 aaKnown RBP12.3□□□□□ -0.44
SMPD4-213ENST00000454468 MAMDC4Q6UXC1 1216 aa12.3□□□□□ -0.44
SMPD4-213ENST00000454468 FAM228AQ86W67 206 aa12.3□□□□□ -0.44
SMPD4-213ENST00000454468 NT5DC4Q86YG4 428 aa12.3□□□□□ -0.44
SMPD4-213ENST00000454468 WDR75Q8IWA0 830 aaKnown RBP12.3□□□□□ -0.44
SMPD4-213ENST00000454468 BANPQ8N9N5 519 aa12.3□□□□□ -0.44
SMPD4-213ENST00000454468 XAB2Q9HCS7 855 aaKnown RBP12.3□□□□□ -0.44
SMPD4-213ENST00000454468 MAN1C1Q9NR34 630 aa12.3□□□□□ -0.44
SMPD4-213ENST00000454468 ARL8BQ9NVJ2 186 aa12.3□□□□□ -0.44
SMPD4-213ENST00000454468 STARD13Q9Y3M8 1113 aa12.3□□□□□ -0.44
SMPD4-213ENST00000454468 TEX264Q9Y6I9 313 aa12.3□□□□□ -0.44
SMPD4-213ENST00000454468 A0A0A0MRY4 1105 aa12.3□□□□□ -0.44
SMPD4-213ENST00000454468 ZMPSTE24O75844 475 aa12.3□□□□□ -0.44
SMPD4-213ENST00000454468 VAV1P15498 845 aa12.3□□□□□ -0.44
SMPD4-213ENST00000454468 PGM1P36871 562 aa12.3□□□□□ -0.44
SMPD4-213ENST00000454468 GARSP41250 739 aaKnown RBP12.3□□□□□ -0.44
SMPD4-213ENST00000454468 GRB14Q14449 540 aa12.3□□□□□ -0.44
SMPD4-213ENST00000454468 KCNJ11Q14654 390 aa12.3□□□□□ -0.44
SMPD4-213ENST00000454468 SLC25A52Q3SY17 297 aa12.3□□□□□ -0.44
SMPD4-213ENST00000454468 NCBP2-AS2Q69YL0 99 aa12.3□□□□□ -0.44
SMPD4-213ENST00000454468 OTOP3Q7RTS5 596 aa12.3□□□□□ -0.44
SMPD4-213ENST00000454468 GPRIN1Q7Z2K8 1008 aa12.3□□□□□ -0.44
SMPD4-213ENST00000454468 SPATA2LQ8IUW3 424 aaPredicted RBP12.3□□□□□ -0.44
SMPD4-213ENST00000454468 MFSD3Q96ES6 412 aa12.3□□□□□ -0.44
SMPD4-213ENST00000454468 SPATA13Q96N96 652 aa12.3□□□□□ -0.44
SMPD4-213ENST00000454468 KATNAL1Q9BW62 490 aa12.3□□□□□ -0.44
SMPD4-213ENST00000454468 MIOSQ9NXC5 875 aa12.3□□□□□ -0.44
SMPD4-213ENST00000454468 PSAT1Q9Y617 370 aa12.3□□□□□ -0.44
SMPD4-213ENST00000454468 DOCK1Q14185 1865 aa12.3□□□□□ -0.44
SMPD4-213ENST00000454468 NUP205Q92621 2012 aa12.29□□□□□ -0.44
SMPD4-213ENST00000454468 PHGDHO43175 533 aaKnown RBP12.29□□□□□ -0.44
SMPD4-213ENST00000454468 TCEA3O75764 348 aa12.29□□□□□ -0.44
SMPD4-213ENST00000454468 GSTA1P08263 222 aa12.29□□□□□ -0.44
SMPD4-213ENST00000454468 PAX7P23759 505 aa12.29□□□□□ -0.44
SMPD4-213ENST00000454468 GABRB2P47870 512 aa12.29□□□□□ -0.44
SMPD4-213ENST00000454468 CDC42EP1Q00587 391 aa12.29□□□□□ -0.44
SMPD4-213ENST00000454468 TSPY1Q01534 308 aa12.29□□□□□ -0.44
SMPD4-213ENST00000454468 CLEC20AQ6ZU45 233 aa12.29□□□□□ -0.44
SMPD4-213ENST00000454468 FAM35AQ86V20 835 aa12.29□□□□□ -0.44
SMPD4-213ENST00000454468 ABI1Q8IZP0 508 aa12.29□□□□□ -0.44
SMPD4-213ENST00000454468 SPATA22Q8NHS9 363 aa12.29□□□□□ -0.44
SMPD4-213ENST00000454468 BHMTQ93088 406 aa12.29□□□□□ -0.44
SMPD4-213ENST00000454468 NFKBIZQ9BYH8 718 aa12.29□□□□□ -0.44
SMPD4-213ENST00000454468 MPP6Q9NZW5 540 aa12.29□□□□□ -0.44
SMPD4-213ENST00000454468 DOCK3Q8IZD9 2030 aa12.29□□□□□ -0.44
SMPD4-213ENST00000454468 TM9SF1O15321 606 aa12.29□□□□□ -0.44
SMPD4-213ENST00000454468 PRPF4O43172 522 aaKnown RBP eCLIP12.29□□□□□ -0.441e-6■□□□□ 8.5
SMPD4-213ENST00000454468 BUD23O43709 281 aaKnown RBP12.29□□□□□ -0.44
SMPD4-213ENST00000454468 TYROBPO43914 113 aa12.29□□□□□ -0.44
SMPD4-213ENST00000454468 CIB2O75838 187 aa12.29□□□□□ -0.44
SMPD4-213ENST00000454468 DGKIO75912 1065 aa12.29□□□□□ -0.44
SMPD4-213ENST00000454468 NFKB1P19838 968 aa12.29□□□□□ -0.44
SMPD4-213ENST00000454468 CRYBB1P53674 252 aaPredicted RBP12.29□□□□□ -0.44
SMPD4-213ENST00000454468 PRPSAP1Q14558 356 aa12.29□□□□□ -0.44
SMPD4-213ENST00000454468 SPNS2Q8IVW8 549 aa12.29□□□□□ -0.44
SMPD4-213ENST00000454468 ZNF567Q8N184 647 aa12.29□□□□□ -0.44
SMPD4-213ENST00000454468 OR6P1Q8NGX9 317 aa12.29□□□□□ -0.44
SMPD4-213ENST00000454468 MYLPFQ96A32 169 aa12.29□□□□□ -0.44
SMPD4-213ENST00000454468 AGAP2Q99490 1192 aa12.29□□□□□ -0.44
SMPD4-213ENST00000454468 ARHGAP39Q9C0H5 1083 aa12.29□□□□□ -0.44
SMPD4-213ENST00000454468 SLC12A4Q9UP95 1085 aa12.29□□□□□ -0.44
SMPD4-213ENST00000454468 MDM4O15151 490 aa12.29□□□□□ -0.44
SMPD4-213ENST00000454468 ZBTB24O43167 697 aaPredicted RBP12.29□□□□□ -0.44
SMPD4-213ENST00000454468 SPAG6O75602 509 aa12.29□□□□□ -0.44
SMPD4-213ENST00000454468 F2P00734 622 aa12.29□□□□□ -0.44
SMPD4-213ENST00000454468 ADRA1BP35368 520 aa12.29□□□□□ -0.44
SMPD4-213ENST00000454468 TRIM32Q13049 653 aa12.29□□□□□ -0.44
SMPD4-213ENST00000454468 PLEKHG4Q58EX7 1191 aa12.29□□□□□ -0.44
SMPD4-213ENST00000454468 ANKRD23Q86SG2 305 aa12.29□□□□□ -0.44
SMPD4-213ENST00000454468 SDCCAG8Q86SQ7 713 aaPredicted RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms