RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 OXTRP30559 389 aa6.24□□□□□ -1.41
HLA-DPA3-207ENST00000454398 MAT2AP31153 395 aaKnown RBP6.24□□□□□ -1.41
HLA-DPA3-207ENST00000454398 CHKAP35790 457 aa6.24□□□□□ -1.41
HLA-DPA3-207ENST00000454398 GGCXP38435 758 aa6.24□□□□□ -1.41
HLA-DPA3-207ENST00000454398 CSKP41240 450 aa6.24□□□□□ -1.41
HLA-DPA3-207ENST00000454398 CTSKP43235 329 aa6.24□□□□□ -1.41
HLA-DPA3-207ENST00000454398 ABCG1P45844 678 aa6.24□□□□□ -1.41
HLA-DPA3-207ENST00000454398 GRIA4P48058 902 aa6.24□□□□□ -1.41
HLA-DPA3-207ENST00000454398 ACADVLP49748 655 aa6.24□□□□□ -1.41
HLA-DPA3-207ENST00000454398 NDUFA8P51970 172 aa6.24□□□□□ -1.41
HLA-DPA3-207ENST00000454398 AP3M2P53677 418 aa6.24□□□□□ -1.41
HLA-DPA3-207ENST00000454398 SNRPFP62306 86 aaKnown RBP6.24□□□□□ -1.41
HLA-DPA3-207ENST00000454398 COG7P83436 770 aa6.24□□□□□ -1.41
HLA-DPA3-207ENST00000454398 HNRNPDQ14103 355 aaKnown RBP6.24□□□□□ -1.41
HLA-DPA3-207ENST00000454398 TEAD4Q15561 434 aa6.24□□□□□ -1.41
HLA-DPA3-207ENST00000454398 TRIP4Q15650 581 aaPredicted RBP6.24□□□□□ -1.41
HLA-DPA3-207ENST00000454398 TTC31Q49AM3 519 aaPredicted RBP6.24□□□□□ -1.41
HLA-DPA3-207ENST00000454398 ZCWPW2Q504Y3 356 aa6.24□□□□□ -1.41
HLA-DPA3-207ENST00000454398 FSCBQ5H9T9 825 aa6.24□□□□□ -1.41
HLA-DPA3-207ENST00000454398 RAB41Q5JT25 222 aa6.24□□□□□ -1.41
HLA-DPA3-207ENST00000454398 HES3Q5TGS1 186 aa6.24□□□□□ -1.41
HLA-DPA3-207ENST00000454398 TCERG1LQ5VWI1 586 aa6.24□□□□□ -1.41
HLA-DPA3-207ENST00000454398 ZNF776Q68DI1 518 aaPredicted RBP6.24□□□□□ -1.41
HLA-DPA3-207ENST00000454398 KIAA0895LQ68EN5 471 aa6.24□□□□□ -1.41
HLA-DPA3-207ENST00000454398 PCSK4Q6UW60 755 aa6.24□□□□□ -1.41
HLA-DPA3-207ENST00000454398 IL27RAQ6UWB1 636 aa6.24□□□□□ -1.41
HLA-DPA3-207ENST00000454398 DBX2Q6ZNG2 339 aa6.24□□□□□ -1.41
HLA-DPA3-207ENST00000454398 TADA2BQ86TJ2 420 aa6.24□□□□□ -1.41
HLA-DPA3-207ENST00000454398 SLC9A9Q8IVB4 645 aa6.24□□□□□ -1.41
HLA-DPA3-207ENST00000454398 MMAAQ8IVH4 418 aaKnown RBP6.24□□□□□ -1.41
HLA-DPA3-207ENST00000454398 MFN1Q8IWA4 741 aa6.24□□□□□ -1.41
HLA-DPA3-207ENST00000454398 SIX6OS1Q8N1H7 587 aa6.24□□□□□ -1.41
HLA-DPA3-207ENST00000454398 CFAP52Q8N1V2 620 aa6.24□□□□□ -1.41
HLA-DPA3-207ENST00000454398 AADATQ8N5Z0 425 aa6.24□□□□□ -1.41
HLA-DPA3-207ENST00000454398 EID2Q8N6I1 236 aa6.24□□□□□ -1.41
HLA-DPA3-207ENST00000454398 TFAP2BQ92481 460 aa6.24□□□□□ -1.41
HLA-DPA3-207ENST00000454398 TAF4BQ92750 862 aa6.24□□□□□ -1.41
HLA-DPA3-207ENST00000454398 ERCC4Q92889 916 aaPredicted RBP6.24□□□□□ -1.41
HLA-DPA3-207ENST00000454398 KAT5Q92993 513 aa6.24□□□□□ -1.41
HLA-DPA3-207ENST00000454398 IGSF8Q969P0 613 aa6.24□□□□□ -1.41
HLA-DPA3-207ENST00000454398 MYO19Q96H55 970 aa6.24□□□□□ -1.41
HLA-DPA3-207ENST00000454398 NAF1Q96HR8 494 aaKnown RBP6.24□□□□□ -1.41
HLA-DPA3-207ENST00000454398 INTS4Q96HW7 963 aaKnown RBP6.24□□□□□ -1.41
HLA-DPA3-207ENST00000454398 LMLNQ96KR4 655 aa6.24□□□□□ -1.41
HLA-DPA3-207ENST00000454398 IPO9Q96P70 1041 aaKnown RBP6.24□□□□□ -1.41
HLA-DPA3-207ENST00000454398 ZSWIM1Q9BR11 485 aa6.24□□□□□ -1.41
HLA-DPA3-207ENST00000454398 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.24□□□□□ -1.41
HLA-DPA3-207ENST00000454398 BTBD1Q9H0C5 482 aa6.24□□□□□ -1.41
HLA-DPA3-207ENST00000454398 NUCKS1Q9H1E3 243 aaKnown RBP6.24□□□□□ -1.41
HLA-DPA3-207ENST00000454398 PABPC3Q9H361 631 aaKnown RBP6.24□□□□□ -1.41
HLA-DPA3-207ENST00000454398 CYP3A43Q9HB55 503 aa6.24□□□□□ -1.41
HLA-DPA3-207ENST00000454398 GDPD2Q9HCC8 539 aa6.24□□□□□ -1.41
HLA-DPA3-207ENST00000454398 TMEM8AQ9HCN3 771 aa6.24□□□□□ -1.41
HLA-DPA3-207ENST00000454398 AASDHPPTQ9NRN7 309 aa6.24□□□□□ -1.41
HLA-DPA3-207ENST00000454398 CGNQ9P2M7 1197 aaKnown RBP6.24□□□□□ -1.41
HLA-DPA3-207ENST00000454398 INTS6Q9UL03 887 aaKnown RBP6.24□□□□□ -1.41
HLA-DPA3-207ENST00000454398 NFE2L3Q9Y4A8 694 aa6.24□□□□□ -1.41
HLA-DPA3-207ENST00000454398 COL5A1P20908 1838 aaPredicted RBP6.24□□□□□ -1.41
HLA-DPA3-207ENST00000454398 COL6A6A6NMZ7 2263 aa6.23□□□□□ -1.41
HLA-DPA3-207ENST00000454398 TDRD6O60522 2096 aaKnown RBP6.23□□□□□ -1.41
HLA-DPA3-207ENST00000454398 TRIM49BA6NDI0 452 aa6.23□□□□□ -1.41
HLA-DPA3-207ENST00000454398 M0QYV0 167 aa6.23□□□□□ -1.41
HLA-DPA3-207ENST00000454398 O00370 1275 aa6.23□□□□□ -1.41
HLA-DPA3-207ENST00000454398 ENC1O14682 589 aa6.23□□□□□ -1.41
HLA-DPA3-207ENST00000454398 TNFSF14O43557 240 aa6.23□□□□□ -1.41
HLA-DPA3-207ENST00000454398 CALUO43852 315 aaPredicted RBP6.23□□□□□ -1.41
HLA-DPA3-207ENST00000454398 HSP90AA1P07900 732 aaKnown RBP6.23□□□□□ -1.41
HLA-DPA3-207ENST00000454398 DLDP09622 509 aaKnown RBP6.23□□□□□ -1.41
HLA-DPA3-207ENST00000454398 MYF5P13349 255 aa6.23□□□□□ -1.41
HLA-DPA3-207ENST00000454398 TRIM21P19474 475 aaKnown RBP6.23□□□□□ -1.41
HLA-DPA3-207ENST00000454398 ABCB4P21439 1286 aa6.23□□□□□ -1.41
HLA-DPA3-207ENST00000454398 CD27P26842 260 aa6.23□□□□□ -1.41
HLA-DPA3-207ENST00000454398 EPHA8P29322 1005 aaPredicted RBP6.23□□□□□ -1.41
HLA-DPA3-207ENST00000454398 EIF2S3P41091 472 aaKnown RBP6.23□□□□□ -1.41
HLA-DPA3-207ENST00000454398 HARS2P49590 506 aaKnown RBP6.23□□□□□ -1.41
HLA-DPA3-207ENST00000454398 PSEN1P49768 467 aa6.23□□□□□ -1.41
HLA-DPA3-207ENST00000454398 IRAK1P51617 712 aa6.23□□□□□ -1.41
HLA-DPA3-207ENST00000454398 PMS1P54277 932 aaKnown RBP6.23□□□□□ -1.41
HLA-DPA3-207ENST00000454398 BCAT1P54687 386 aa6.23□□□□□ -1.41
HLA-DPA3-207ENST00000454398 ADPRHP54922 357 aa6.23□□□□□ -1.41
HLA-DPA3-207ENST00000454398 C21orf59P57076 290 aa6.23□□□□□ -1.41
HLA-DPA3-207ENST00000454398 PITX1P78337 314 aaPredicted RBP6.23□□□□□ -1.41
HLA-DPA3-207ENST00000454398 CENPCQ03188 943 aa6.23□□□□□ -1.41
HLA-DPA3-207ENST00000454398 CCDC173Q0VFZ6 552 aa6.23□□□□□ -1.41
HLA-DPA3-207ENST00000454398 DPYDQ12882 1025 aa6.23□□□□□ -1.41
HLA-DPA3-207ENST00000454398 CUL2Q13617 745 aa6.23□□□□□ -1.41
HLA-DPA3-207ENST00000454398 CDH18Q13634 790 aa6.23□□□□□ -1.41
HLA-DPA3-207ENST00000454398 SMAD1Q15797 465 aaKnown RBP6.23□□□□□ -1.41
HLA-DPA3-207ENST00000454398 CST6Q15828 149 aa6.23□□□□□ -1.41
HLA-DPA3-207ENST00000454398 MPPE1Q53F39 396 aa6.23□□□□□ -1.41
HLA-DPA3-207ENST00000454398 BSPRYQ5W0U4 402 aa6.23□□□□□ -1.41
HLA-DPA3-207ENST00000454398 ARHGAP17Q68EM7 881 aa6.23□□□□□ -1.41
HLA-DPA3-207ENST00000454398 KDM7AQ6ZMT4 941 aa6.23□□□□□ -1.41
HLA-DPA3-207ENST00000454398 INTS8Q75QN2 995 aaKnown RBP6.23□□□□□ -1.41
HLA-DPA3-207ENST00000454398 METTL3Q86U44 580 aaKnown RBP6.23□□□□□ -1.41
HLA-DPA3-207ENST00000454398 AHI1Q8N157 1196 aa6.23□□□□□ -1.41
HLA-DPA3-207ENST00000454398 STK40Q8N2I9 435 aa6.23□□□□□ -1.41
HLA-DPA3-207ENST00000454398 CPXM2Q8N436 756 aa6.23□□□□□ -1.41
HLA-DPA3-207ENST00000454398 CARNMT1Q8N4J0 409 aa6.23□□□□□ -1.41
HLA-DPA3-207ENST00000454398 CCDC150Q8NCX0 1101 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms