RNA–Protein interactions for RNA: ENST00000452979.5

HERC3-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 3

Gene HERC3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-207ENST00000452979 E7ENQ6 273 aa12.15□□□□□ -0.46
HERC3-207ENST00000452979 TULP2O00295 520 aa12.15□□□□□ -0.46
HERC3-207ENST00000452979 VILLO15195 856 aa12.15□□□□□ -0.46
HERC3-207ENST00000452979 IGHV4-34P06331 123 aa12.15□□□□□ -0.46
HERC3-207ENST00000452979 ATP5BP06576 529 aaKnown RBP12.15□□□□□ -0.46
HERC3-207ENST00000452979 CCT8P50990 548 aa12.15□□□□□ -0.46
HERC3-207ENST00000452979 BCAT1P54687 386 aa12.15□□□□□ -0.46
HERC3-207ENST00000452979 RACK1P63244 317 aaKnown RBP12.15□□□□□ -0.46
HERC3-207ENST00000452979 ZCWPW2Q504Y3 356 aa12.15□□□□□ -0.46
HERC3-207ENST00000452979 MBLAC2Q68D91 279 aa12.15□□□□□ -0.46
HERC3-207ENST00000452979 USP30Q70CQ3 517 aa12.15□□□□□ -0.46
HERC3-207ENST00000452979 TMPRSS12Q86WS5 348 aa12.15□□□□□ -0.46
HERC3-207ENST00000452979 GUF1Q8N442 669 aaKnown RBP12.15□□□□□ -0.46
HERC3-207ENST00000452979 ZNF366Q8N895 744 aa12.15□□□□□ -0.46
HERC3-207ENST00000452979 RNF139Q8WU17 664 aa12.15□□□□□ -0.46
HERC3-207ENST00000452979 KCTD13Q8WZ19 329 aa12.15□□□□□ -0.46
HERC3-207ENST00000452979 TATDN2Q93075 761 aa12.15□□□□□ -0.46
HERC3-207ENST00000452979 AZIN2Q96A70 460 aa12.15□□□□□ -0.46
HERC3-207ENST00000452979 TTC17Q96AE7 1141 aa12.15□□□□□ -0.46
HERC3-207ENST00000452979 LMLNQ96KR4 655 aa12.15□□□□□ -0.46
HERC3-207ENST00000452979 MMRN2Q9H8L6 949 aa12.15□□□□□ -0.46
HERC3-207ENST00000452979 ABCC13Q9NSE7 274 aa12.15□□□□□ -0.46
HERC3-207ENST00000452979 ABCB8Q9NUT2 735 aa12.15□□□□□ -0.46
HERC3-207ENST00000452979 SFMBT1Q9UHJ3 866 aa12.15□□□□□ -0.46
HERC3-207ENST00000452979 PCDHGA1Q9Y5H4 931 aa12.15□□□□□ -0.46
HERC3-207ENST00000452979 CABIN1Q9Y6J0 2220 aa12.15□□□□□ -0.46
HERC3-207ENST00000452979 ACACAQ13085 2346 aa12.15□□□□□ -0.46
HERC3-207ENST00000452979 APC2O95996 2303 aa12.14□□□□□ -0.47
HERC3-207ENST00000452979 A0A1B0GTQ1 180 aa12.14□□□□□ -0.47
HERC3-207ENST00000452979 FAM149AA5PLN7 773 aa12.14□□□□□ -0.47
HERC3-207ENST00000452979 FSBPO95073 299 aa12.14□□□□□ -0.47
HERC3-207ENST00000452979 ZNF202O95125 648 aa12.14□□□□□ -0.47
HERC3-207ENST00000452979 IGLV3-27P01718 113 aa12.14□□□□□ -0.47
HERC3-207ENST00000452979 PABPC1P11940 636 aaKnown RBP12.14□□□□□ -0.47
HERC3-207ENST00000452979 POLR2EP19388 210 aaKnown RBP12.14□□□□□ -0.47
HERC3-207ENST00000452979 DPYDQ12882 1025 aa12.14□□□□□ -0.47
HERC3-207ENST00000452979 ARID5BQ14865 1188 aa12.14□□□□□ -0.47
HERC3-207ENST00000452979 NFKBIBQ15653 356 aa12.14□□□□□ -0.47
HERC3-207ENST00000452979 TTC31Q49AM3 519 aaPredicted RBP12.14□□□□□ -0.47
HERC3-207ENST00000452979 PIK3R6Q5UE93 754 aa12.14□□□□□ -0.47
HERC3-207ENST00000452979 KIAA0895LQ68EN5 471 aa12.14□□□□□ -0.47
HERC3-207ENST00000452979 ZNF557Q8N988 423 aaPredicted RBP12.14□□□□□ -0.47
HERC3-207ENST00000452979 EDEM1Q92611 657 aa12.14□□□□□ -0.47
HERC3-207ENST00000452979 CCDC47Q96A33 483 aaKnown RBP12.14□□□□□ -0.47
HERC3-207ENST00000452979 MYO19Q96H55 970 aa12.14□□□□□ -0.47
HERC3-207ENST00000452979 LRRC4Q9HBW1 653 aa12.14□□□□□ -0.47
HERC3-207ENST00000452979 TSPAN16Q9UKR8 245 aa12.14□□□□□ -0.47
HERC3-207ENST00000452979 KIAA1257Q9ULG3 409 aa12.14□□□□□ -0.47
HERC3-207ENST00000452979 MAPK8IP1Q9UQF2 711 aa12.14□□□□□ -0.47
HERC3-207ENST00000452979 NCKAP1Q9Y2A7 1128 aa12.14□□□□□ -0.47
HERC3-207ENST00000452979 GCN1Q92616 2671 aaKnown RBP12.14□□□□□ -0.47
HERC3-207ENST00000452979 URB1O60287 2271 aaKnown RBP12.14□□□□□ -0.47
HERC3-207ENST00000452979 SHROOM3Q8TF72 1996 aa12.13□□□□□ -0.47
HERC3-207ENST00000452979 A0A1W2PPC4 97 aa12.13□□□□□ -0.47
HERC3-207ENST00000452979 IRAK2O43187 625 aa12.13□□□□□ -0.47
HERC3-207ENST00000452979 STX10O60499 249 aa12.13□□□□□ -0.47
HERC3-207ENST00000452979 C1SP09871 688 aa12.13□□□□□ -0.47
HERC3-207ENST00000452979 PRR29P0C7W0 189 aa12.13□□□□□ -0.47
HERC3-207ENST00000452979 CDK4P11802 303 aa12.13□□□□□ -0.47
HERC3-207ENST00000452979 CD70P32970 193 aa12.13□□□□□ -0.47
HERC3-207ENST00000452979 MXI1P50539 228 aa12.13□□□□□ -0.47
HERC3-207ENST00000452979 SGSHP51688 502 aa12.13□□□□□ -0.47
HERC3-207ENST00000452979 GALCP54803 685 aa12.13□□□□□ -0.47
HERC3-207ENST00000452979 ADIGQ0VDE8 80 aa12.13□□□□□ -0.47
HERC3-207ENST00000452979 BST2Q10589 180 aaKnown RBP12.13□□□□□ -0.47
HERC3-207ENST00000452979 GOLGA7BQ2TAP0 167 aa12.13□□□□□ -0.47
HERC3-207ENST00000452979 EDRF1Q3B7T1 1238 aa12.13□□□□□ -0.47
HERC3-207ENST00000452979 INAVAQ3KP66 663 aa12.13□□□□□ -0.47
HERC3-207ENST00000452979 FAM133BQ5BKY9 247 aaKnown RBP12.13□□□□□ -0.47
HERC3-207ENST00000452979 ZNF776Q68DI1 518 aaPredicted RBP12.13□□□□□ -0.47
HERC3-207ENST00000452979 MSANTD2Q6P1R3 559 aa12.13□□□□□ -0.47
HERC3-207ENST00000452979 DHRS13Q6UX07 377 aa12.13□□□□□ -0.47
HERC3-207ENST00000452979 LAYNQ6UX15 382 aa12.13□□□□□ -0.47
HERC3-207ENST00000452979 KRBA2Q6ZNG9 492 aa12.13□□□□□ -0.47
HERC3-207ENST00000452979 KDM1BQ8NB78 822 aa12.13□□□□□ -0.47
HERC3-207ENST00000452979 FIBINQ8TAL6 211 aa12.13□□□□□ -0.47
HERC3-207ENST00000452979 WFDC5Q8TCV5 224 aa12.13□□□□□ -0.47
HERC3-207ENST00000452979 ACE2Q9BYF1 805 aaPredicted RBP12.13□□□□□ -0.47
HERC3-207ENST00000452979 PABPC3Q9H361 631 aaKnown RBP12.13□□□□□ -0.47
HERC3-207ENST00000452979 CNGB3Q9NQW8 809 aa12.13□□□□□ -0.47
HERC3-207ENST00000452979 FTSJ1Q9UET6 329 aa12.13□□□□□ -0.47
HERC3-207ENST00000452979 ADAMTS1Q9UHI8 967 aa12.13□□□□□ -0.47
HERC3-207ENST00000452979 COQ4Q9Y3A0 265 aa12.13□□□□□ -0.47
HERC3-207ENST00000452979 KNL1Q8NG31 2342 aa12.12□□□□□ -0.47
HERC3-207ENST00000452979 GABBR2O75899 941 aa12.12□□□□□ -0.47
HERC3-207ENST00000452979 VDRP11473 427 aa12.12□□□□□ -0.47
HERC3-207ENST00000452979 SLC6A4P31645 630 aa12.12□□□□□ -0.47
HERC3-207ENST00000452979 C21orf59P57076 290 aa12.12□□□□□ -0.47
HERC3-207ENST00000452979 DAOAP59103 153 aa12.12□□□□□ -0.47
HERC3-207ENST00000452979 SFSWAPQ12872 951 aaKnown RBP12.12□□□□□ -0.47
HERC3-207ENST00000452979 SHBQ15464 509 aa12.12□□□□□ -0.47
HERC3-207ENST00000452979 HNRNPA1L2Q32P51 320 aaKnown RBP12.12□□□□□ -0.47
HERC3-207ENST00000452979 PKDCCQ504Y2 493 aa12.12□□□□□ -0.47
HERC3-207ENST00000452979 SGO2Q562F6 1265 aa12.12□□□□□ -0.47
HERC3-207ENST00000452979 NUGGCQ68CJ6 796 aa12.12□□□□□ -0.47
HERC3-207ENST00000452979 ADAT2Q7Z6V5 191 aaKnown RBP12.12□□□□□ -0.47
HERC3-207ENST00000452979 UNC45BQ8IWX7 931 aa12.12□□□□□ -0.47
HERC3-207ENST00000452979 SIX6OS1Q8N1H7 587 aa12.12□□□□□ -0.47
HERC3-207ENST00000452979 UBA3Q8TBC4 463 aa12.12□□□□□ -0.47
HERC3-207ENST00000452979 SAP25Q8TEE9 199 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms