RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 HERVK_113Q902F9 699 aa4.88□□□□□ -1.63
LINC00393-202ENST00000452852 HTRA1Q92743 480 aa4.88□□□□□ -1.63
LINC00393-202ENST00000452852 SCAMP4Q969E2 229 aa4.88□□□□□ -1.63
LINC00393-202ENST00000452852 RRP36Q96EU6 259 aaKnown RBP4.88□□□□□ -1.63
LINC00393-202ENST00000452852 COQ10AQ96MF6 247 aa4.88□□□□□ -1.63
LINC00393-202ENST00000452852 COG8Q96MW5 612 aa4.88□□□□□ -1.63
LINC00393-202ENST00000452852 BARD1Q99728 777 aaKnown RBP4.88□□□□□ -1.63
LINC00393-202ENST00000452852 TTYH3Q9C0H2 523 aa4.88□□□□□ -1.63
LINC00393-202ENST00000452852 PABPC3Q9H361 631 aaKnown RBP4.88□□□□□ -1.63
LINC00393-202ENST00000452852 UNC45AQ9H3U1 944 aa4.88□□□□□ -1.63
LINC00393-202ENST00000452852 TAF1DQ9H5J8 278 aaPredicted RBP4.88□□□□□ -1.63
LINC00393-202ENST00000452852 RASSF1Q9NS23 344 aa4.88□□□□□ -1.63
LINC00393-202ENST00000452852 RABGAP1Q9Y3P9 1069 aa4.88□□□□□ -1.63
LINC00393-202ENST00000452852 SOS1Q07889 1333 aaPredicted RBP4.88□□□□□ -1.63
LINC00393-202ENST00000452852 ITIH6Q6UXX5 1313 aa4.88□□□□□ -1.63
LINC00393-202ENST00000452852 WDR90Q96KV7 1748 aa4.88□□□□□ -1.63
LINC00393-202ENST00000452852 PCNTO95613 3336 aa4.88□□□□□ -1.63
LINC00393-202ENST00000452852 COL15A1P39059 1388 aa4.88□□□□□ -1.63
LINC00393-202ENST00000452852 BCORQ6W2J9 1755 aa4.88□□□□□ -1.63
LINC00393-202ENST00000452852 DICER1Q9UPY3 1922 aaKnown RBP4.87□□□□□ -1.63
LINC00393-202ENST00000452852 ARFGEF2Q9Y6D5 1785 aa4.87□□□□□ -1.63
LINC00393-202ENST00000452852 LOC102723971A0A1B0GUV8 181 aa4.87□□□□□ -1.63
LINC00393-202ENST00000452852 B4E171 279 aa4.87□□□□□ -1.63
LINC00393-202ENST00000452852 TOMM70O94826 608 aa4.87□□□□□ -1.63
LINC00393-202ENST00000452852 TBX18O95935 607 aa4.87□□□□□ -1.63
LINC00393-202ENST00000452852 CYP19A1P11511 503 aaPredicted RBP4.87□□□□□ -1.63
LINC00393-202ENST00000452852 FDXRP22570 491 aa4.87□□□□□ -1.63
LINC00393-202ENST00000452852 MPLP40238 635 aa4.87□□□□□ -1.63
LINC00393-202ENST00000452852 TSPAN7P41732 249 aa4.87□□□□□ -1.63
LINC00393-202ENST00000452852 PTDSS1P48651 473 aaKnown RBP4.87□□□□□ -1.63
LINC00393-202ENST00000452852 VAV2P52735 878 aa4.87□□□□□ -1.63
LINC00393-202ENST00000452852 NR1H2P55055 460 aa4.87□□□□□ -1.63
LINC00393-202ENST00000452852 AP2B1P63010 937 aa4.87□□□□□ -1.63
LINC00393-202ENST00000452852 SLC39A6Q13433 755 aa4.87□□□□□ -1.63
LINC00393-202ENST00000452852 CCDC30Q5VVM6 783 aa4.87□□□□□ -1.63
LINC00393-202ENST00000452852 FAM160B1Q5W0V3 765 aa4.87□□□□□ -1.63
LINC00393-202ENST00000452852 ZNF280BQ86YH2 543 aa4.87□□□□□ -1.63
LINC00393-202ENST00000452852 NSUN7Q8NE18 718 aaKnown RBP4.87□□□□□ -1.63
LINC00393-202ENST00000452852 PTCD3Q96EY7 689 aaKnown RBP4.87□□□□□ -1.63
LINC00393-202ENST00000452852 PPP1R9BQ96SB3 815 aa4.87□□□□□ -1.63
LINC00393-202ENST00000452852 SEPSECSQ9HD40 501 aaKnown RBP4.87□□□□□ -1.63
LINC00393-202ENST00000452852 TBCCD1Q9NVR7 557 aa4.87□□□□□ -1.63
LINC00393-202ENST00000452852 IRAK4Q9NWZ3 460 aa4.87□□□□□ -1.63
LINC00393-202ENST00000452852 NARFQ9UHQ1 456 aa4.87□□□□□ -1.63
LINC00393-202ENST00000452852 SLC13A4Q9UKG4 626 aa4.87□□□□□ -1.63
LINC00393-202ENST00000452852 NUDCQ9Y266 331 aa4.87□□□□□ -1.63
LINC00393-202ENST00000452852 TMEM98Q9Y2Y6 226 aa4.87□□□□□ -1.63
LINC00393-202ENST00000452852 DTNAQ9Y4J8 743 aa4.87□□□□□ -1.63
LINC00393-202ENST00000452852 AFG3L2Q9Y4W6 797 aa4.87□□□□□ -1.63
LINC00393-202ENST00000452852 MAST3O60307 1309 aa4.87□□□□□ -1.63
LINC00393-202ENST00000452852 DLG5Q8TDM6 1919 aa4.87□□□□□ -1.63
LINC00393-202ENST00000452852 NPC1L1Q9UHC9 1359 aa4.87□□□□□ -1.63
LINC00393-202ENST00000452852 LAMB4A4D0S4 1761 aa4.86□□□□□ -1.63
LINC00393-202ENST00000452852 ANKRD31Q8N7Z5 1873 aa4.86□□□□□ -1.63
LINC00393-202ENST00000452852 H0YIN7 160 aa4.86□□□□□ -1.63
LINC00393-202ENST00000452852 POLRMTO00411 1230 aaKnown RBP4.86□□□□□ -1.63
LINC00393-202ENST00000452852 PCDH17O14917 1159 aa4.86□□□□□ -1.63
LINC00393-202ENST00000452852 COQ9O75208 318 aa4.86□□□□□ -1.63
LINC00393-202ENST00000452852 BAIAP3O94812 1187 aa4.86□□□□□ -1.63
LINC00393-202ENST00000452852 INMTO95050 263 aa4.86□□□□□ -1.63
LINC00393-202ENST00000452852 ESRRBO95718 433 aa4.86□□□□□ -1.63
LINC00393-202ENST00000452852 LMNAP02545 664 aaKnown RBP4.86□□□□□ -1.63
LINC00393-202ENST00000452852 ANXA1P04083 346 aa4.86□□□□□ -1.63
LINC00393-202ENST00000452852 SRGAP2BP0DMP2 458 aa4.86□□□□□ -1.63
LINC00393-202ENST00000452852 CHRM3P20309 590 aa4.86□□□□□ -1.63
LINC00393-202ENST00000452852 BMP5P22003 454 aa4.86□□□□□ -1.63
LINC00393-202ENST00000452852 KLRK1P26718 216 aa4.86□□□□□ -1.63
LINC00393-202ENST00000452852 TM4SF1P30408 202 aa4.86□□□□□ -1.63
LINC00393-202ENST00000452852 CHRNA5P30532 468 aa4.86□□□□□ -1.63
LINC00393-202ENST00000452852 PLA2G5P39877 138 aa4.86□□□□□ -1.63
LINC00393-202ENST00000452852 PAPOLAP51003 745 aaKnown RBP4.86□□□□□ -1.63
LINC00393-202ENST00000452852 BCAT1P54687 386 aa4.86□□□□□ -1.63
LINC00393-202ENST00000452852 POLE2P56282 527 aa4.86□□□□□ -1.63
LINC00393-202ENST00000452852 DDR1Q08345 913 aa4.86□□□□□ -1.63
LINC00393-202ENST00000452852 ZNF844Q08AG5 666 aa4.86□□□□□ -1.63
LINC00393-202ENST00000452852 TRPC3Q13507 836 aa4.86□□□□□ -1.63
LINC00393-202ENST00000452852 SLC12A1Q13621 1099 aa4.86□□□□□ -1.63
LINC00393-202ENST00000452852 PDE1CQ14123 709 aaPredicted RBP4.86□□□□□ -1.63
LINC00393-202ENST00000452852 FAXCQ5TGI0 409 aa4.86□□□□□ -1.63
LINC00393-202ENST00000452852 CACHD1Q5VU97 1274 aa4.86□□□□□ -1.63
LINC00393-202ENST00000452852 C16orf54Q6UWD8 224 aa4.86□□□□□ -1.63
LINC00393-202ENST00000452852 OLFML1Q6UWY5 402 aa4.86□□□□□ -1.63
LINC00393-202ENST00000452852 SLC30A10Q6XR72 485 aa4.86□□□□□ -1.63
LINC00393-202ENST00000452852 SLC44A2Q8IWA5 706 aaPredicted RBP4.86□□□□□ -1.63
LINC00393-202ENST00000452852 CFAP52Q8N1V2 620 aa4.86□□□□□ -1.63
LINC00393-202ENST00000452852 PDPRQ8NCN5 879 aa4.86□□□□□ -1.63
LINC00393-202ENST00000452852 C1orf131Q8NDD1 294 aaKnown RBP4.86□□□□□ -1.63
LINC00393-202ENST00000452852 HVCN1Q96D96 273 aa4.86□□□□□ -1.63
LINC00393-202ENST00000452852 ZG16BQ96DA0 208 aa4.86□□□□□ -1.63
LINC00393-202ENST00000452852 ZBTB10Q96DT7 871 aa4.86□□□□□ -1.63
LINC00393-202ENST00000452852 NAF1Q96HR8 494 aaKnown RBP4.86□□□□□ -1.63
LINC00393-202ENST00000452852 SLC46A1Q96NT5 459 aa4.86□□□□□ -1.63
LINC00393-202ENST00000452852 TRAPPC9Q96Q05 1148 aa4.86□□□□□ -1.63
LINC00393-202ENST00000452852 RTKNQ9BST9 563 aa4.86□□□□□ -1.63
LINC00393-202ENST00000452852 CENPOQ9BU64 300 aa4.86□□□□□ -1.63
LINC00393-202ENST00000452852 DDX23Q9BUQ8 820 aaKnown RBP4.86□□□□□ -1.63
LINC00393-202ENST00000452852 TEX13AQ9BXU3 409 aaPredicted RBP4.86□□□□□ -1.63
LINC00393-202ENST00000452852 PRDM8Q9NQV8 689 aa4.86□□□□□ -1.63
LINC00393-202ENST00000452852 ZSCAN32Q9NX65 697 aa4.86□□□□□ -1.63
LINC00393-202ENST00000452852 CLIC5Q9NZA1 410 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms