RNA–Protein interactions for RNA: ENST00000452013.5

COL8A1-203, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 2

Gene COL8A1, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-203ENST00000452013 MFAP3LO75121 409 aa9.18□□□□□ -0.94
COL8A1-203ENST00000452013 MOCS3O95396 460 aa9.18□□□□□ -0.94
COL8A1-203ENST00000452013 TUBB4AP04350 444 aa9.18□□□□□ -0.94
COL8A1-203ENST00000452013 ATP5BP06576 529 aaKnown RBP9.18□□□□□ -0.94
COL8A1-203ENST00000452013 SP9P0CG40 484 aa9.18□□□□□ -0.94
COL8A1-203ENST00000452013 VCANP13611 3396 aa9.18□□□□□ -0.94
COL8A1-203ENST00000452013 TFE3P19532 575 aaPredicted RBP9.18□□□□□ -0.94
COL8A1-203ENST00000452013 HOXD9P28356 352 aaPredicted RBP9.18□□□□□ -0.94
COL8A1-203ENST00000452013 HOXA6P31267 233 aa9.18□□□□□ -0.94
COL8A1-203ENST00000452013 ADRA1BP35368 520 aa9.18□□□□□ -0.94
COL8A1-203ENST00000452013 TIE1P35590 1138 aa9.18□□□□□ -0.94
COL8A1-203ENST00000452013 EIF4A3P38919 411 aaKnown RBP9.18□□□□□ -0.94
COL8A1-203ENST00000452013 KIR2DL1P43626 348 aaPredicted RBP9.18□□□□□ -0.94
COL8A1-203ENST00000452013 ZNF143P52747 638 aaPredicted RBP9.18□□□□□ -0.94
COL8A1-203ENST00000452013 ADKP55263 362 aaKnown RBP9.18□□□□□ -0.94
COL8A1-203ENST00000452013 SATB1Q01826 763 aa9.18□□□□□ -0.94
COL8A1-203ENST00000452013 TCF15Q12870 199 aa9.18□□□□□ -0.94
COL8A1-203ENST00000452013 TBX2Q13207 712 aaPredicted RBP9.18□□□□□ -0.94
COL8A1-203ENST00000452013 MAPK8IP2Q13387 824 aaPredicted RBP9.18□□□□□ -0.94
COL8A1-203ENST00000452013 MAMLD1Q13495 774 aa9.18□□□□□ -0.94
COL8A1-203ENST00000452013 SLC12A1Q13621 1099 aa9.18□□□□□ -0.94
COL8A1-203ENST00000452013 AUHQ13825 339 aaKnown RBP9.18□□□□□ -0.94
COL8A1-203ENST00000452013 DMC1Q14565 340 aa9.18□□□□□ -0.94
COL8A1-203ENST00000452013 EIF4HQ15056 248 aaKnown RBP9.18□□□□□ -0.94
COL8A1-203ENST00000452013 CDO1Q16878 200 aa9.18□□□□□ -0.94
COL8A1-203ENST00000452013 PPP1R15BQ5SWA1 713 aa9.18□□□□□ -0.94
COL8A1-203ENST00000452013 EMC10Q5UCC4 262 aa9.18□□□□□ -0.94
COL8A1-203ENST00000452013 BNIPLQ7Z465 357 aa9.18□□□□□ -0.94
COL8A1-203ENST00000452013 ANKS1BQ7Z6G8 1248 aa9.18□□□□□ -0.94
COL8A1-203ENST00000452013 MFN1Q8IWA4 741 aa9.18□□□□□ -0.94
COL8A1-203ENST00000452013 MAML2Q8IZL2 1156 aaPredicted RBP9.18□□□□□ -0.94
COL8A1-203ENST00000452013 CFAP52Q8N1V2 620 aa9.18□□□□□ -0.94
COL8A1-203ENST00000452013 CARNMT1Q8N4J0 409 aa9.18□□□□□ -0.94
COL8A1-203ENST00000452013 FAM172AQ8WUF8 416 aa9.18□□□□□ -0.94
COL8A1-203ENST00000452013 ATRIPQ8WXE1 791 aa9.18□□□□□ -0.94
COL8A1-203ENST00000452013 EZH1Q92800 747 aaPredicted RBP9.18□□□□□ -0.94
COL8A1-203ENST00000452013 ZNF653Q96CK0 615 aa9.18□□□□□ -0.94
COL8A1-203ENST00000452013 CCDC42Q96M95 316 aa9.18□□□□□ -0.94
COL8A1-203ENST00000452013 RPRD1AQ96P16 312 aaPredicted RBP9.18□□□□□ -0.94
COL8A1-203ENST00000452013 MCEEQ96PE7 176 aa9.18□□□□□ -0.94
COL8A1-203ENST00000452013 PRMT1Q99873 361 aaKnown RBP9.18□□□□□ -0.94
COL8A1-203ENST00000452013 ABHD10Q9NUJ1 306 aa9.18□□□□□ -0.94
COL8A1-203ENST00000452013 ELOVL2Q9NXB9 296 aa9.18□□□□□ -0.94
COL8A1-203ENST00000452013 KIAA1522Q9P206 1035 aaPredicted RBP9.18□□□□□ -0.94
COL8A1-203ENST00000452013 ARHGAP20Q9P2F6 1191 aa9.18□□□□□ -0.94
COL8A1-203ENST00000452013 MYO1AQ9UBC5 1043 aa9.18□□□□□ -0.94
COL8A1-203ENST00000452013 XPO7Q9UIA9 1087 aaKnown RBP9.18□□□□□ -0.94
COL8A1-203ENST00000452013 PLA2G4CQ9UP65 541 aa9.18□□□□□ -0.94
COL8A1-203ENST00000452013 HS3ST4Q9Y661 456 aa9.18□□□□□ -0.94
COL8A1-203ENST00000452013 TTC28Q96AY4 2481 aa9.17□□□□□ -0.94
COL8A1-203ENST00000452013 C5orf42Q9H799 3197 aa9.17□□□□□ -0.94
COL8A1-203ENST00000452013 BDP1A6H8Y1 2624 aa9.17□□□□□ -0.94
COL8A1-203ENST00000452013 A0A087X0T9 212 aa9.17□□□□□ -0.94
COL8A1-203ENST00000452013 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.17□□□□□ -0.94
COL8A1-203ENST00000452013 TMEM191CA6NGB0 347 aa9.17□□□□□ -0.94
COL8A1-203ENST00000452013 DRGXA6NNA5 263 aa9.17□□□□□ -0.94
COL8A1-203ENST00000452013 PRRT4C9JH25 899 aa9.17□□□□□ -0.94
COL8A1-203ENST00000452013 CLDN11O75508 207 aa9.17□□□□□ -0.94
COL8A1-203ENST00000452013 RNF8O76064 485 aa9.17□□□□□ -0.94
COL8A1-203ENST00000452013 ALDH1A2O94788 518 aa9.17□□□□□ -0.94
COL8A1-203ENST00000452013 LUC7L3O95232 432 aaKnown RBP9.17□□□□□ -0.94
COL8A1-203ENST00000452013 GJB6O95452 261 aa9.17□□□□□ -0.94
COL8A1-203ENST00000452013 KLF8O95600 359 aaPredicted RBP9.17□□□□□ -0.94
COL8A1-203ENST00000452013 PLEKP08567 350 aaPredicted RBP9.17□□□□□ -0.94
COL8A1-203ENST00000452013 FAM228BP0C875 321 aa9.17□□□□□ -0.94
COL8A1-203ENST00000452013 PABPC1P11940 636 aaKnown RBP9.17□□□□□ -0.94
COL8A1-203ENST00000452013 HNRNPLP14866 589 aaKnown RBP eCLIP9.17□□□□□ -0.94
COL8A1-203ENST00000452013 POLR2EP19388 210 aaKnown RBP9.17□□□□□ -0.94
COL8A1-203ENST00000452013 PSMA2P25787 234 aa9.17□□□□□ -0.94
COL8A1-203ENST00000452013 NTSR1P30989 418 aa9.17□□□□□ -0.94
COL8A1-203ENST00000452013 DGKEP52429 567 aa9.17□□□□□ -0.94
COL8A1-203ENST00000452013 AIF1P55008 147 aa9.17□□□□□ -0.94
COL8A1-203ENST00000452013 RPL7AP62424 266 aaKnown RBP9.17□□□□□ -0.94
COL8A1-203ENST00000452013 RPS24P62847 133 aaKnown RBP9.17□□□□□ -0.94
COL8A1-203ENST00000452013 ZNF177Q13360 481 aaPredicted RBP9.17□□□□□ -0.94
COL8A1-203ENST00000452013 CDH18Q13634 790 aa9.17□□□□□ -0.94
COL8A1-203ENST00000452013 ACAP1Q15027 740 aa9.17□□□□□ -0.94
COL8A1-203ENST00000452013 SLC18A3Q16572 532 aa9.17□□□□□ -0.94
COL8A1-203ENST00000452013 GEN1Q17RS7 908 aa9.17□□□□□ -0.94
COL8A1-203ENST00000452013 C15orf59Q2T9L4 293 aaPredicted RBP9.17□□□□□ -0.94
COL8A1-203ENST00000452013 OTUD1Q5VV17 481 aaPredicted RBP9.17□□□□□ -0.94
COL8A1-203ENST00000452013 TRNP1Q6NT89 227 aa9.17□□□□□ -0.94
COL8A1-203ENST00000452013 FBXL22Q6P050 247 aa9.17□□□□□ -0.94
COL8A1-203ENST00000452013 SCYL2Q6P3W7 929 aa9.17□□□□□ -0.94
COL8A1-203ENST00000452013 ZC3H14Q6PJT7 736 aaKnown RBP9.17□□□□□ -0.94
COL8A1-203ENST00000452013 CHST9Q7L1S5 443 aa9.17□□□□□ -0.94
COL8A1-203ENST00000452013 KIAA0907Q7Z7F0 614 aaPredicted RBP9.17□□□□□ -0.94
COL8A1-203ENST00000452013 SLFN11Q7Z7L1 901 aa9.17□□□□□ -0.94
COL8A1-203ENST00000452013 FAM131BQ86XD5 332 aa9.17□□□□□ -0.94
COL8A1-203ENST00000452013 CHPFQ8IZ52 775 aa9.17□□□□□ -0.94
COL8A1-203ENST00000452013 AHI1Q8N157 1196 aa9.17□□□□□ -0.94
COL8A1-203ENST00000452013 CCDC33Q8N5R6 958 aa9.17□□□□□ -0.94
COL8A1-203ENST00000452013 ALLCQ8N6M5 410 aa9.17□□□□□ -0.94
COL8A1-203ENST00000452013 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.17□□□□□ -0.94
COL8A1-203ENST00000452013 ZNF513Q8N8E2 541 aaPredicted RBP9.17□□□□□ -0.94
COL8A1-203ENST00000452013 IL17RCQ8NAC3 791 aa9.17□□□□□ -0.94
COL8A1-203ENST00000452013 TXNDC5Q8NBS9 432 aaKnown RBP9.17□□□□□ -0.94
COL8A1-203ENST00000452013 MYRIPQ8NFW9 859 aa9.17□□□□□ -0.94
COL8A1-203ENST00000452013 OLIG1Q8TAK6 271 aa9.17□□□□□ -0.94
COL8A1-203ENST00000452013 KIAA1524Q8TCG1 905 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms