RNA–Protein interactions for RNA: ENST00000451716.5

COL27A1-202, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-202ENST00000451716 ANKRD20A3Q5VUR7 823 aa12.44□□□□□ -0.42
COL27A1-202ENST00000451716 RNF43Q68DV7 783 aa12.44□□□□□ -0.42
COL27A1-202ENST00000451716 CASC4Q6P4E1 433 aa12.44□□□□□ -0.42
COL27A1-202ENST00000451716 SLC26A11Q86WA9 606 aa12.44□□□□□ -0.42
COL27A1-202ENST00000451716 PDCD7Q8N8D1 485 aaKnown RBP12.44□□□□□ -0.42
COL27A1-202ENST00000451716 HASPINQ8TF76 798 aa12.44□□□□□ -0.42
COL27A1-202ENST00000451716 GRAMD1AQ96CP6 724 aa12.44□□□□□ -0.42
COL27A1-202ENST00000451716 KLHL29Q96CT2 875 aa12.44□□□□□ -0.42
COL27A1-202ENST00000451716 PCED1BQ96HM7 432 aa12.44□□□□□ -0.42
COL27A1-202ENST00000451716 NMRK2Q9NPI5 230 aa12.44□□□□□ -0.42
COL27A1-202ENST00000451716 CAPN9O14815 690 aa12.44□□□□□ -0.42
COL27A1-202ENST00000451716 TOP3BO95985 862 aaKnown RBP12.44□□□□□ -0.42
COL27A1-202ENST00000451716 CHRNA1P02708 482 aa12.44□□□□□ -0.42
COL27A1-202ENST00000451716 ZFXP17010 805 aaPredicted RBP12.44□□□□□ -0.42
COL27A1-202ENST00000451716 CDC25CP30307 473 aa12.44□□□□□ -0.42
COL27A1-202ENST00000451716 LRPAP1P30533 357 aa12.44□□□□□ -0.42
COL27A1-202ENST00000451716 SESN2P58004 480 aaPredicted RBP12.44□□□□□ -0.42
COL27A1-202ENST00000451716 MROH9Q5TGP6 573 aa12.44□□□□□ -0.42
COL27A1-202ENST00000451716 SH2D5Q6ZV89 423 aa12.44□□□□□ -0.42
COL27A1-202ENST00000451716 VSIG1Q86XK7 387 aa12.44□□□□□ -0.42
COL27A1-202ENST00000451716 EDEM1Q92611 657 aa12.44□□□□□ -0.42
COL27A1-202ENST00000451716 APBA2Q99767 749 aa12.44□□□□□ -0.42
COL27A1-202ENST00000451716 SMOQ99835 787 aa12.44□□□□□ -0.42
COL27A1-202ENST00000451716 ARHGAP39Q9C0H5 1083 aa12.44□□□□□ -0.42
COL27A1-202ENST00000451716 AGO3Q9H9G7 860 aaKnown RBP12.44□□□□□ -0.42
COL27A1-202ENST00000451716 IL1RAPL1Q9NZN1 696 aa12.44□□□□□ -0.42
COL27A1-202ENST00000451716 STK38LQ9Y2H1 464 aa12.44□□□□□ -0.42
COL27A1-202ENST00000451716 SNX10Q9Y5X0 201 aa12.44□□□□□ -0.42
COL27A1-202ENST00000451716 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.43□□□□□ -0.42
COL27A1-202ENST00000451716 M0QZ92 97 aa12.43□□□□□ -0.42
COL27A1-202ENST00000451716 KCNK1O00180 336 aa12.43□□□□□ -0.42
COL27A1-202ENST00000451716 GABRDO14764 452 aa12.43□□□□□ -0.42
COL27A1-202ENST00000451716 DAB1O75553 588 aa12.43□□□□□ -0.42
COL27A1-202ENST00000451716 DGKIO75912 1065 aa12.43□□□□□ -0.42
COL27A1-202ENST00000451716 APOEP02649 317 aa12.43□□□□□ -0.42
COL27A1-202ENST00000451716 FAM200BP0CF97 657 aa12.43□□□□□ -0.42
COL27A1-202ENST00000451716 TSHRP16473 764 aa12.43□□□□□ -0.42
COL27A1-202ENST00000451716 NOS2P35228 1153 aa12.43□□□□□ -0.42
COL27A1-202ENST00000451716 NR2C2P49116 596 aa12.43□□□□□ -0.42
COL27A1-202ENST00000451716 DSTYKQ6XUX3 929 aa12.43□□□□□ -0.42
COL27A1-202ENST00000451716 RGS9BPQ6ZS82 235 aa12.43□□□□□ -0.42
COL27A1-202ENST00000451716 CCDC80Q76M96 950 aa12.43□□□□□ -0.42
COL27A1-202ENST00000451716 ARCQ7LC44 396 aa12.43□□□□□ -0.42
COL27A1-202ENST00000451716 COLGALT1Q8NBJ5 622 aa12.43□□□□□ -0.42
COL27A1-202ENST00000451716 RFWD2Q8NHY2 731 aa12.43□□□□□ -0.42
COL27A1-202ENST00000451716 P2RY11Q96G91 374 aa12.43□□□□□ -0.42
COL27A1-202ENST00000451716 OLFM3Q96PB7 478 aa12.43□□□□□ -0.42
COL27A1-202ENST00000451716 TMEM237Q96Q45 408 aa12.43□□□□□ -0.42
COL27A1-202ENST00000451716 NPY6RQ99463 290 aa12.43□□□□□ -0.42
COL27A1-202ENST00000451716 TSC22D3Q99576 134 aa12.43□□□□□ -0.42
COL27A1-202ENST00000451716 MECRQ9BV79 373 aa12.43□□□□□ -0.42
COL27A1-202ENST00000451716 MANSC1Q9H8J5 431 aa12.43□□□□□ -0.42
COL27A1-202ENST00000451716 SSU72Q9NP77 194 aaKnown RBP12.43□□□□□ -0.42
COL27A1-202ENST00000451716 UBAP1Q9NZ09 502 aa12.43□□□□□ -0.42
COL27A1-202ENST00000451716 BAIAP2L1Q9UHR4 511 aa12.43□□□□□ -0.42
COL27A1-202ENST00000451716 NUMBLQ9Y6R0 609 aa12.43□□□□□ -0.42
COL27A1-202ENST00000451716 WDR27A2RRH5 827 aa12.43□□□□□ -0.42
COL27A1-202ENST00000451716 ARL5CA6NH57 179 aa12.43□□□□□ -0.42
COL27A1-202ENST00000451716 A8MUI8 341 aa12.43□□□□□ -0.42
COL27A1-202ENST00000451716 RNF103O00237 685 aa12.43□□□□□ -0.42
COL27A1-202ENST00000451716 KRT38O76015 456 aa12.43□□□□□ -0.42
COL27A1-202ENST00000451716 THP07101 528 aa12.43□□□□□ -0.42
COL27A1-202ENST00000451716 AKR1A1P14550 325 aa12.43□□□□□ -0.42
COL27A1-202ENST00000451716 BGNP21810 368 aa12.43□□□□□ -0.42
COL27A1-202ENST00000451716 HOXC8P31273 242 aa12.43□□□□□ -0.42
COL27A1-202ENST00000451716 SCNN1AP37088 669 aa12.43□□□□□ -0.42
COL27A1-202ENST00000451716 MAGEA6P43360 314 aa12.43□□□□□ -0.42
COL27A1-202ENST00000451716 TRIM32Q13049 653 aa12.43□□□□□ -0.42
COL27A1-202ENST00000451716 ZMIZ2Q8NF64 920 aa12.43□□□□□ -0.42
COL27A1-202ENST00000451716 SRPK1Q96SB4 655 aaKnown RBP12.43□□□□□ -0.42
COL27A1-202ENST00000451716 EBNA1BP2Q99848 306 aaKnown RBP12.43□□□□□ -0.42
COL27A1-202ENST00000451716 SYT15Q9BQS2 421 aa12.43□□□□□ -0.42
COL27A1-202ENST00000451716 PRDM12Q9H4Q4 367 aa12.43□□□□□ -0.42
COL27A1-202ENST00000451716 CYLDQ9NQC7 956 aa12.43□□□□□ -0.42
COL27A1-202ENST00000451716 MRPL42Q9Y6G3 142 aaKnown RBP12.43□□□□□ -0.42
COL27A1-202ENST00000451716 NUP205Q92621 2012 aa12.42□□□□□ -0.42
COL27A1-202ENST00000451716 C2orf71A6NGG8 1288 aa12.42□□□□□ -0.42
COL27A1-202ENST00000451716 ZNF487B1APH4 448 aa12.42□□□□□ -0.42
COL27A1-202ENST00000451716 TM9SF1O15321 606 aa12.42□□□□□ -0.42
COL27A1-202ENST00000451716 SPAG6O75602 509 aa12.42□□□□□ -0.42
COL27A1-202ENST00000451716 POMCP01189 267 aa12.42□□□□□ -0.42
COL27A1-202ENST00000451716 KRT16P08779 473 aa12.42□□□□□ -0.42
COL27A1-202ENST00000451716 NCAM1P13591 858 aa12.42□□□□□ -0.42
COL27A1-202ENST00000451716 NQO1P15559 274 aaKnown RBP12.42□□□□□ -0.42
COL27A1-202ENST00000451716 TARSP26639 723 aaKnown RBP12.42□□□□□ -0.42
COL27A1-202ENST00000451716 MAGEA3P43357 314 aa12.42□□□□□ -0.42
COL27A1-202ENST00000451716 NEK3P51956 506 aa12.42□□□□□ -0.42
COL27A1-202ENST00000451716 CRHR2Q13324 411 aa12.42□□□□□ -0.42
COL27A1-202ENST00000451716 ACCSLQ4AC99 568 aa12.42□□□□□ -0.42
COL27A1-202ENST00000451716 TTC39BQ5VTQ0 682 aaPredicted RBP12.42□□□□□ -0.42
COL27A1-202ENST00000451716 TAF2Q6P1X5 1199 aa12.42□□□□□ -0.42
COL27A1-202ENST00000451716 AGMOQ6ZNB7 445 aa12.42□□□□□ -0.42
COL27A1-202ENST00000451716 GBP7Q8N8V2 638 aaPredicted RBP12.42□□□□□ -0.42
COL27A1-202ENST00000451716 MCUQ8NE86 351 aa12.42□□□□□ -0.42
COL27A1-202ENST00000451716 DEPDC1BQ8WUY9 529 aa12.42□□□□□ -0.42
COL27A1-202ENST00000451716 C10orf82Q8WW14 230 aa12.42□□□□□ -0.42
COL27A1-202ENST00000451716 APOPT1Q96IL0 206 aa12.42□□□□□ -0.42
COL27A1-202ENST00000451716 LRRC37BQ96QE4 947 aa12.42□□□□□ -0.42
COL27A1-202ENST00000451716 USH1CQ9Y6N9 552 aa12.42□□□□□ -0.42
COL27A1-202ENST00000451716 A0A0A0MRY4 1105 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms