RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 JCHAINP01591 159 aa12.7□□□□□ -0.38
UBE3B-204ENST00000449510 S100BP04271 92 aaPredicted RBP12.7□□□□□ -0.38
UBE3B-204ENST00000449510 XRCC1P18887 633 aaPredicted RBP12.7□□□□□ -0.38
UBE3B-204ENST00000449510 NDST1P52848 882 aa12.7□□□□□ -0.38
UBE3B-204ENST00000449510 CBX3Q13185 183 aa12.7□□□□□ -0.38
UBE3B-204ENST00000449510 PHF13Q86YI8 300 aaPredicted RBP12.7□□□□□ -0.38
UBE3B-204ENST00000449510 GMCL1P1Q8NEA9 526 aa12.7□□□□□ -0.38
UBE3B-204ENST00000449510 VPS39Q96JC1 886 aa12.7□□□□□ -0.38
UBE3B-204ENST00000449510 PLEKHG4BQ96PX9 1271 aa12.7□□□□□ -0.38
UBE3B-204ENST00000449510 ARMC7Q9H6L4 198 aa12.7□□□□□ -0.38
UBE3B-204ENST00000449510 NMRAL1Q9HBL8 299 aa12.7□□□□□ -0.38
UBE3B-204ENST00000449510 CLEC11AQ9Y240 323 aa12.7□□□□□ -0.38
UBE3B-204ENST00000449510 OGTO15294 1046 aa12.7□□□□□ -0.38
UBE3B-204ENST00000449510 GFAPP14136 432 aa12.7□□□□□ -0.38
UBE3B-204ENST00000449510 PSMB4P28070 264 aa12.7□□□□□ -0.38
UBE3B-204ENST00000449510 CCR10P46092 362 aa12.7□□□□□ -0.38
UBE3B-204ENST00000449510 SLC5A3P53794 718 aa12.7□□□□□ -0.38
UBE3B-204ENST00000449510 FASTKD5Q7L8L6 764 aaKnown RBP12.7□□□□□ -0.38
UBE3B-204ENST00000449510 BNIPLQ7Z465 357 aa12.7□□□□□ -0.38
UBE3B-204ENST00000449510 OFCC1Q8IZS5 231 aa12.7□□□□□ -0.38
UBE3B-204ENST00000449510 NDRG1Q92597 394 aaKnown RBP12.7□□□□□ -0.38
UBE3B-204ENST00000449510 NKD2Q969F2 451 aaPredicted RBP12.7□□□□□ -0.38
UBE3B-204ENST00000449510 SNX5Q9Y5X3 404 aa12.7□□□□□ -0.38
UBE3B-204ENST00000449510 MED1Q15648 1581 aaPredicted RBP12.69□□□□□ -0.38
UBE3B-204ENST00000449510 ADGRA2Q96PE1 1338 aa12.69□□□□□ -0.38
UBE3B-204ENST00000449510 KDM3BQ7LBC6 1761 aa12.69□□□□□ -0.38
UBE3B-204ENST00000449510 MYH1P12882 1939 aa12.69□□□□□ -0.38
UBE3B-204ENST00000449510 MYH4Q9Y623 1939 aa12.69□□□□□ -0.38
UBE3B-204ENST00000449510 MTA2O94776 668 aa12.69□□□□□ -0.38
UBE3B-204ENST00000449510 ZBTB11O95625 1053 aaPredicted RBP12.69□□□□□ -0.38
UBE3B-204ENST00000449510 CHRNGP07510 517 aa12.69□□□□□ -0.38
UBE3B-204ENST00000449510 PIK3R1P27986 724 aa12.69□□□□□ -0.38
UBE3B-204ENST00000449510 SLC9A4Q6AI14 798 aa12.69□□□□□ -0.38
UBE3B-204ENST00000449510 TDRPQ86YL5 185 aa12.69□□□□□ -0.38
UBE3B-204ENST00000449510 DSELQ8IZU8 1212 aa12.69□□□□□ -0.38
UBE3B-204ENST00000449510 MAGEE2Q8TD90 523 aaPredicted RBP12.69□□□□□ -0.38
UBE3B-204ENST00000449510 DDX1Q92499 740 aaKnown RBP12.69□□□□□ -0.38
UBE3B-204ENST00000449510 RSL24D1Q9UHA3 163 aaKnown RBP12.69□□□□□ -0.38
UBE3B-204ENST00000449510 UBR1Q8IWV7 1749 aa12.69□□□□□ -0.38
UBE3B-204ENST00000449510 RNF103O00237 685 aa12.69□□□□□ -0.38
UBE3B-204ENST00000449510 DNAJA2O60884 412 aa12.69□□□□□ -0.38
UBE3B-204ENST00000449510 CRTAMO95727 393 aa12.69□□□□□ -0.38
UBE3B-204ENST00000449510 CLIC3O95833 236 aa12.69□□□□□ -0.38
UBE3B-204ENST00000449510 NFKBIAP25963 317 aa12.69□□□□□ -0.38
UBE3B-204ENST00000449510 CAP2P40123 477 aa12.69□□□□□ -0.38
UBE3B-204ENST00000449510 NR1H2P55055 460 aa12.69□□□□□ -0.38
UBE3B-204ENST00000449510 LPIN1Q14693 890 aa12.69□□□□□ -0.38
UBE3B-204ENST00000449510 SURF1Q15526 300 aa12.69□□□□□ -0.38
UBE3B-204ENST00000449510 TATDN1Q6P1N9 297 aa12.69□□□□□ -0.38
UBE3B-204ENST00000449510 SLC7A14Q8TBB6 771 aa12.69□□□□□ -0.38
UBE3B-204ENST00000449510 RNF157Q96PX1 679 aa12.69□□□□□ -0.38
UBE3B-204ENST00000449510 EBNA1BP2Q99848 306 aaKnown RBP12.69□□□□□ -0.38
UBE3B-204ENST00000449510 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.69□□□□□ -0.38
UBE3B-204ENST00000449510 TMCO1Q9UM00 188 aa12.69□□□□□ -0.38
UBE3B-204ENST00000449510 LRRC37A3O60309 1634 aa12.69□□□□□ -0.38
UBE3B-204ENST00000449510 NCF1BA6NI72 391 aaPredicted RBP12.69□□□□□ -0.38
UBE3B-204ENST00000449510 SIGLEC16A6NMB1 481 aa12.69□□□□□ -0.38
UBE3B-204ENST00000449510 NCF1CA8MVU1 366 aaPredicted RBP12.69□□□□□ -0.38
UBE3B-204ENST00000449510 M0QYT0 321 aa12.69□□□□□ -0.38
UBE3B-204ENST00000449510 BAIAP3O94812 1187 aa12.69□□□□□ -0.38
UBE3B-204ENST00000449510 OATP04181 439 aa12.69□□□□□ -0.38
UBE3B-204ENST00000449510 PCNAP12004 261 aa12.69□□□□□ -0.38
UBE3B-204ENST00000449510 NCF1P14598 390 aaPredicted RBP12.69□□□□□ -0.38
UBE3B-204ENST00000449510 CNTN2Q02246 1040 aa12.69□□□□□ -0.38
UBE3B-204ENST00000449510 FBXO48Q5FWF7 155 aa12.69□□□□□ -0.38
UBE3B-204ENST00000449510 XKR5Q6UX68 686 aa12.69□□□□□ -0.38
UBE3B-204ENST00000449510 GK5Q6ZS86 529 aa12.69□□□□□ -0.38
UBE3B-204ENST00000449510 CATSPER4Q7RTX7 472 aa12.69□□□□□ -0.38
UBE3B-204ENST00000449510 PTCD3Q96EY7 689 aaKnown RBP12.69□□□□□ -0.38
UBE3B-204ENST00000449510 TMEM176AQ96HP8 235 aa12.69□□□□□ -0.38
UBE3B-204ENST00000449510 MFSD14AQ96MC6 490 aa12.69□□□□□ -0.38
UBE3B-204ENST00000449510 ZMAT2Q96NC0 199 aaKnown RBP12.69□□□□□ -0.38
UBE3B-204ENST00000449510 SNRNP25Q9BV90 132 aaKnown RBP12.69□□□□□ -0.38
UBE3B-204ENST00000449510 ZNF408Q9H9D4 720 aa12.69□□□□□ -0.38
UBE3B-204ENST00000449510 PALMDQ9NP74 551 aa12.69□□□□□ -0.38
UBE3B-204ENST00000449510 PXMP2Q9NR77 195 aa12.69□□□□□ -0.38
UBE3B-204ENST00000449510 SUN2Q9UH99 717 aa12.69□□□□□ -0.38
UBE3B-204ENST00000449510 MYH11P35749 1972 aa12.69□□□□□ -0.38
UBE3B-204ENST00000449510 J3QRK9 145 aa12.68□□□□□ -0.38
UBE3B-204ENST00000449510 B4GALT5O43286 388 aa12.68□□□□□ -0.38
UBE3B-204ENST00000449510 SRP72O76094 671 aaKnown RBP12.68□□□□□ -0.38
UBE3B-204ENST00000449510 VAPBO95292 243 aa12.68□□□□□ -0.38
UBE3B-204ENST00000449510 ERBB2P04626 1255 aa12.68□□□□□ -0.38
UBE3B-204ENST00000449510 THOP1P52888 689 aa12.68□□□□□ -0.38
UBE3B-204ENST00000449510 TPI1P60174 286 aa12.68□□□□□ -0.38
UBE3B-204ENST00000449510 WASHC5Q12768 1159 aa12.68□□□□□ -0.38
UBE3B-204ENST00000449510 GK3PQ14409 553 aa12.68□□□□□ -0.38
UBE3B-204ENST00000449510 RAB6CQ53S08 254 aa12.68□□□□□ -0.38
UBE3B-204ENST00000449510 MFSD4BQ5TF39 518 aa12.68□□□□□ -0.38
UBE3B-204ENST00000449510 CHST15Q7LFX5 561 aaPredicted RBP12.68□□□□□ -0.38
UBE3B-204ENST00000449510 NAT8LQ8N9F0 302 aa12.68□□□□□ -0.38
UBE3B-204ENST00000449510 SKA1Q96BD8 255 aa12.68□□□□□ -0.38
UBE3B-204ENST00000449510 FBXL8Q96CD0 374 aa12.68□□□□□ -0.38
UBE3B-204ENST00000449510 ZFRQ96KR1 1074 aaKnown RBP12.68□□□□□ -0.38
UBE3B-204ENST00000449510 SPATA33Q96N06 139 aa12.68□□□□□ -0.38
UBE3B-204ENST00000449510 OR52B2Q96RD2 323 aa12.68□□□□□ -0.38
UBE3B-204ENST00000449510 RAB6CQ9H0N0 254 aa12.68□□□□□ -0.38
UBE3B-204ENST00000449510 TRNAU1APQ9NX07 287 aaKnown RBP12.68□□□□□ -0.38
UBE3B-204ENST00000449510 PSMD13Q9UNM6 376 aa12.68□□□□□ -0.38
UBE3B-204ENST00000449510 MAGEB2O15479 319 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms