RNA–Protein interactions for RNA: ENST00000449476.6

CTC1-202, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 4,797 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-202ENST00000449476 CBX4O00257 560 aa10.65□□□□□ -0.7
CTC1-202ENST00000449476 CKMP06732 381 aa10.65□□□□□ -0.7
CTC1-202ENST00000449476 HNRNPCP07910 306 aaKnown RBP eCLIP10.65□□□□□ -0.7
CTC1-202ENST00000449476 GJB1P08034 283 aa10.65□□□□□ -0.7
CTC1-202ENST00000449476 ERVK-10P10266 1014 aa10.65□□□□□ -0.7
CTC1-202ENST00000449476 SERPINB10P48595 397 aa10.65□□□□□ -0.7
CTC1-202ENST00000449476 CDK7P50613 346 aa10.65□□□□□ -0.7
CTC1-202ENST00000449476 TBX4P57082 545 aa10.65□□□□□ -0.7
CTC1-202ENST00000449476 SPDYE7PQ495Y7 208 aa10.65□□□□□ -0.7
CTC1-202ENST00000449476 APTXQ7Z2E3 356 aaKnown RBP10.65□□□□□ -0.7
CTC1-202ENST00000449476 SLC22A9Q8IVM8 553 aa10.65□□□□□ -0.7
CTC1-202ENST00000449476 PRCCQ92733 491 aaPredicted RBP10.65□□□□□ -0.7
CTC1-202ENST00000449476 UBXN6Q9BZV1 441 aa10.65□□□□□ -0.7
CTC1-202ENST00000449476 NMRAL1Q9HBL8 299 aa10.65□□□□□ -0.7
CTC1-202ENST00000449476 ADAMTS3O15072 1205 aa10.65□□□□□ -0.7
CTC1-202ENST00000449476 PSMC3P17980 439 aa10.65□□□□□ -0.7
CTC1-202ENST00000449476 ABCG1P45844 678 aa10.65□□□□□ -0.7
CTC1-202ENST00000449476 CLK2P49760 499 aaKnown RBP10.65□□□□□ -0.7
CTC1-202ENST00000449476 CRADDP78560 199 aa10.65□□□□□ -0.7
CTC1-202ENST00000449476 PDK4Q16654 411 aa10.65□□□□□ -0.7
CTC1-202ENST00000449476 IYDQ6PHW0 289 aa10.65□□□□□ -0.7
CTC1-202ENST00000449476 STK32AQ8WU08 396 aa10.65□□□□□ -0.7
CTC1-202ENST00000449476 SLCO1B3Q9NPD5 702 aa10.65□□□□□ -0.7
CTC1-202ENST00000449476 TMEM161AQ9NX61 479 aa10.65□□□□□ -0.7
CTC1-202ENST00000449476 MRPL42Q9Y6G3 142 aaKnown RBP10.65□□□□□ -0.7
CTC1-202ENST00000449476 TMEM191CA6NGB0 347 aa10.65□□□□□ -0.71
CTC1-202ENST00000449476 MEI4A8MW99 385 aa10.65□□□□□ -0.71
CTC1-202ENST00000449476 MBL2P11226 248 aaPredicted RBP10.65□□□□□ -0.71
CTC1-202ENST00000449476 ZNF23P17027 643 aa10.65□□□□□ -0.71
CTC1-202ENST00000449476 PTPN1P18031 435 aaKnown RBP10.65□□□□□ -0.71
CTC1-202ENST00000449476 MMP8P22894 467 aa10.65□□□□□ -0.71
CTC1-202ENST00000449476 BDNFP23560 247 aa10.65□□□□□ -0.71
CTC1-202ENST00000449476 PSMB4P28070 264 aa10.65□□□□□ -0.71
CTC1-202ENST00000449476 MAP3K10Q02779 954 aa10.65□□□□□ -0.71
CTC1-202ENST00000449476 TCHHL1Q5QJ38 904 aaPredicted RBP10.65□□□□□ -0.71
CTC1-202ENST00000449476 CACHD1Q5VU97 1274 aa10.65□□□□□ -0.71
CTC1-202ENST00000449476 LRRC8BQ6P9F7 803 aa10.65□□□□□ -0.71
CTC1-202ENST00000449476 PLPPR4Q7Z2D5 763 aa10.65□□□□□ -0.71
CTC1-202ENST00000449476 PIGZQ86VD9 579 aa10.65□□□□□ -0.71
CTC1-202ENST00000449476 RNF148Q8N7C7 305 aa10.65□□□□□ -0.71
CTC1-202ENST00000449476 ANKRD27Q96NW4 1050 aa10.65□□□□□ -0.71
CTC1-202ENST00000449476 FBXO44Q9H4M3 255 aa10.65□□□□□ -0.71
CTC1-202ENST00000449476 ACSS3Q9H6R3 686 aa10.65□□□□□ -0.71
CTC1-202ENST00000449476 NRDE2Q9H7Z3 1164 aa10.65□□□□□ -0.71
CTC1-202ENST00000449476 SCUBE2Q9NQ36 999 aa10.65□□□□□ -0.71
CTC1-202ENST00000449476 KCNK4Q9NYG8 393 aa10.65□□□□□ -0.71
CTC1-202ENST00000449476 VPS28Q9UK41 221 aa10.65□□□□□ -0.71
CTC1-202ENST00000449476 E7ENQ6 273 aa10.64□□□□□ -0.71
CTC1-202ENST00000449476 UNC5CO95185 931 aa10.64□□□□□ -0.71
CTC1-202ENST00000449476 RANBP1P43487 201 aa10.64□□□□□ -0.71
CTC1-202ENST00000449476 MMP13P45452 471 aa10.64□□□□□ -0.71
CTC1-202ENST00000449476 NUDT18Q6ZVK8 323 aa10.64□□□□□ -0.71
CTC1-202ENST00000449476 TNIP2Q8NFZ5 429 aa10.64□□□□□ -0.71
CTC1-202ENST00000449476 PGLYRP2Q96PD5 576 aa10.64□□□□□ -0.71
CTC1-202ENST00000449476 PRPF18Q99633 342 aaKnown RBP10.64□□□□□ -0.71
CTC1-202ENST00000449476 MTG1Q9BT17 334 aaPredicted RBP10.64□□□□□ -0.71
CTC1-202ENST00000449476 ELOVL4Q9GZR5 314 aa10.64□□□□□ -0.71
CTC1-202ENST00000449476 NMRK2Q9NPI5 230 aa10.64□□□□□ -0.71
CTC1-202ENST00000449476 NDUFA13Q9P0J0 144 aa10.64□□□□□ -0.71
CTC1-202ENST00000449476 IGLV3-22A0A075B6J6 115 aa10.64□□□□□ -0.71
CTC1-202ENST00000449476 ALOX15BO15296 676 aa10.64□□□□□ -0.71
CTC1-202ENST00000449476 CRABP2P29373 138 aa10.64□□□□□ -0.71
CTC1-202ENST00000449476 RAB27AP51159 221 aa10.64□□□□□ -0.71
CTC1-202ENST00000449476 RHOAP61586 193 aa10.64□□□□□ -0.71
CTC1-202ENST00000449476 CHRNB3Q05901 458 aa10.64□□□□□ -0.71
CTC1-202ENST00000449476 GJC2Q5T442 439 aaPredicted RBP10.64□□□□□ -0.71
CTC1-202ENST00000449476 WSCD1Q658N2 575 aa10.64□□□□□ -0.71
CTC1-202ENST00000449476 PKN3Q6P5Z2 889 aa10.64□□□□□ -0.71
CTC1-202ENST00000449476 ABHD15Q6UXT9 468 aa10.64□□□□□ -0.71
CTC1-202ENST00000449476 LRRC57Q8N9N7 239 aa10.64□□□□□ -0.71
CTC1-202ENST00000449476 OR52K1Q8NGK4 314 aa10.64□□□□□ -0.71
CTC1-202ENST00000449476 PIWIL2Q8TC59 973 aaKnown RBP10.64□□□□□ -0.71
CTC1-202ENST00000449476 SERPINB11Q96P15 392 aa10.64□□□□□ -0.71
CTC1-202ENST00000449476 ZNF556Q9HAH1 456 aa10.64□□□□□ -0.71
CTC1-202ENST00000449476 NUDT5Q9UKK9 219 aa10.64□□□□□ -0.71
CTC1-202ENST00000449476 COG5Q9UP83 839 aa10.64□□□□□ -0.71
CTC1-202ENST00000449476 PCDHB5Q9Y5E4 795 aa10.64□□□□□ -0.71
CTC1-202ENST00000449476 SNCAIPQ9Y6H5 919 aa10.64□□□□□ -0.71
CTC1-202ENST00000449476 MYPNQ86TC9 1320 aa10.64□□□□□ -0.71
CTC1-202ENST00000449476 PHGDHO43175 533 aaKnown RBP10.64□□□□□ -0.71
CTC1-202ENST00000449476 PDE5AO76074 875 aa10.64□□□□□ -0.71
CTC1-202ENST00000449476 ALDH2P05091 517 aa10.64□□□□□ -0.71
CTC1-202ENST00000449476 ITGALP20701 1170 aa10.64□□□□□ -0.71
CTC1-202ENST00000449476 DNAJB2P25686 324 aa10.64□□□□□ -0.71
CTC1-202ENST00000449476 PRKAA2P54646 552 aa10.64□□□□□ -0.71
CTC1-202ENST00000449476 NAB1Q13506 487 aa10.64□□□□□ -0.71
CTC1-202ENST00000449476 ZC3H12AQ5D1E8 599 aaKnown RBP10.64□□□□□ -0.71
CTC1-202ENST00000449476 APLFQ8IW19 511 aaPredicted RBP10.64□□□□□ -0.71
CTC1-202ENST00000449476 MYO1HQ8N1T3 1032 aa10.64□□□□□ -0.71
CTC1-202ENST00000449476 CARNMT1Q8N4J0 409 aa10.64□□□□□ -0.71
CTC1-202ENST00000449476 HELQQ8TDG4 1101 aa10.64□□□□□ -0.71
CTC1-202ENST00000449476 SIKE1Q9BRV8 207 aa10.64□□□□□ -0.71
CTC1-202ENST00000449476 TLR8Q9NR97 1041 aaKnown RBP10.64□□□□□ -0.71
CTC1-202ENST00000449476 VTI1BQ9UEU0 232 aa10.64□□□□□ -0.71
CTC1-202ENST00000449476 OR12D3Q9UGF7 316 aa10.64□□□□□ -0.71
CTC1-202ENST00000449476 R3HDM2Q9Y2K5 976 aaKnown RBP10.64□□□□□ -0.71
CTC1-202ENST00000449476 LRCH1Q9Y2L9 728 aa10.64□□□□□ -0.71
CTC1-202ENST00000449476 C2CD2Q9Y426 696 aa10.64□□□□□ -0.71
CTC1-202ENST00000449476 RIPK3Q9Y572 518 aa10.64□□□□□ -0.71
CTC1-202ENST00000449476 KDM4FA0A1W2PPD8 638 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms