RNA–Protein interactions for RNA: ENST00000449339.1

AP000253.1-201, humanhuman

TSL 3 BASIC

Gene AP000253.1, Length 2,233 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000253.1-201ENST00000449339 MARCH5Q9NX47 278 aa16.59■□□□□ 0.25
AP000253.1-201ENST00000449339 PCDH10Q9P2E7 1040 aa16.59■□□□□ 0.25
AP000253.1-201ENST00000449339 ZC3H7BQ9UGR2 993 aaKnown RBP16.59■□□□□ 0.25
AP000253.1-201ENST00000449339 ADAM28Q9UKQ2 775 aa16.59■□□□□ 0.25
AP000253.1-201ENST00000449339 IKBKGQ9Y6K9 419 aa16.59■□□□□ 0.25
AP000253.1-201ENST00000449339 SF3B1O75533 1304 aaKnown RBP eCLIP16.59■□□□□ 0.253e-6■■■■■ 137.9
AP000253.1-201ENST00000449339 TANC1Q9C0D5 1861 aa16.58■□□□□ 0.25
AP000253.1-201ENST00000449339 MYO16Q9Y6X6 1858 aa16.58■□□□□ 0.25
AP000253.1-201ENST00000449339 A0A0A0MRY4 1105 aa16.58■□□□□ 0.25
AP000253.1-201ENST00000449339 GBP2P32456 591 aaPredicted RBP16.58■□□□□ 0.25
AP000253.1-201ENST00000449339 MAGEA3P43357 314 aa16.58■□□□□ 0.25
AP000253.1-201ENST00000449339 FAAP100Q0VG06 881 aa16.58■□□□□ 0.25
AP000253.1-201ENST00000449339 SEMA5AQ13591 1074 aa16.58■□□□□ 0.25
AP000253.1-201ENST00000449339 DPYSQ14117 519 aa16.58■□□□□ 0.25
AP000253.1-201ENST00000449339 SPARCL1Q14515 664 aa16.58■□□□□ 0.25
AP000253.1-201ENST00000449339 ZKSCAN8Q15776 578 aaPredicted RBP16.58■□□□□ 0.25
AP000253.1-201ENST00000449339 TRIM60Q495X7 471 aa16.58■□□□□ 0.25
AP000253.1-201ENST00000449339 ANKRD20A2Q5SQ80 823 aa16.58■□□□□ 0.25
AP000253.1-201ENST00000449339 ANKRD20A1Q5TYW2 823 aa16.58■□□□□ 0.25
AP000253.1-201ENST00000449339 ANKRD20A3Q5VUR7 823 aa16.58■□□□□ 0.25
AP000253.1-201ENST00000449339 SLC39A5Q6ZMH5 540 aa16.58■□□□□ 0.25
AP000253.1-201ENST00000449339 ZNF534Q76KX8 674 aa16.58■□□□□ 0.25
AP000253.1-201ENST00000449339 TMEM173Q86WV6 379 aaPredicted RBP16.58■□□□□ 0.25
AP000253.1-201ENST00000449339 SPATA13Q96N96 652 aa16.58■□□□□ 0.25
AP000253.1-201ENST00000449339 SEZ6LQ9BYH1 1024 aa16.58■□□□□ 0.25
AP000253.1-201ENST00000449339 SSU72Q9NP77 194 aaKnown RBP16.58■□□□□ 0.25
AP000253.1-201ENST00000449339 PNPLA8Q9NP80 782 aa16.58■□□□□ 0.25
AP000253.1-201ENST00000449339 TBKBP1A7MCY6 615 aa16.58■□□□□ 0.24
AP000253.1-201ENST00000449339 TNFRSF10BO14763 440 aa16.58■□□□□ 0.24
AP000253.1-201ENST00000449339 TLE2Q04725 743 aa16.58■□□□□ 0.24
AP000253.1-201ENST00000449339 AP1B1Q10567 949 aa16.58■□□□□ 0.24
AP000253.1-201ENST00000449339 SCAPQ12770 1279 aa16.58■□□□□ 0.24
AP000253.1-201ENST00000449339 DDR2Q16832 855 aa16.58■□□□□ 0.24
AP000253.1-201ENST00000449339 DENND5BQ6ZUT9 1274 aa16.58■□□□□ 0.24
AP000253.1-201ENST00000449339 TP53INP2Q8IXH6 220 aa16.58■□□□□ 0.24
AP000253.1-201ENST00000449339 CRIPAKQ8N1N5 446 aa16.58■□□□□ 0.24
AP000253.1-201ENST00000449339 MICALL1Q8N3F8 863 aa16.58■□□□□ 0.24
AP000253.1-201ENST00000449339 TTC9BQ8N6N2 239 aa16.58■□□□□ 0.24
AP000253.1-201ENST00000449339 DIS3LQ8TF46 1054 aaKnown RBP16.58■□□□□ 0.24
AP000253.1-201ENST00000449339 SLC44A1Q8WWI5 657 aa16.58■□□□□ 0.24
AP000253.1-201ENST00000449339 IRGQQ8WZA9 623 aa16.58■□□□□ 0.24
AP000253.1-201ENST00000449339 CCT6BQ92526 530 aa16.58■□□□□ 0.24
AP000253.1-201ENST00000449339 LRRC39Q96DD0 335 aa16.58■□□□□ 0.24
AP000253.1-201ENST00000449339 PGAP3Q96FM1 320 aaPredicted RBP16.58■□□□□ 0.24
AP000253.1-201ENST00000449339 COLEC11Q9BWP8 271 aa16.58■□□□□ 0.24
AP000253.1-201ENST00000449339 FBXW11Q9UKB1 542 aa16.58■□□□□ 0.24
AP000253.1-201ENST00000449339 FNDC1Q4ZHG4 1894 aaPredicted RBP16.57■□□□□ 0.24
AP000253.1-201ENST00000449339 OAS1P00973 400 aaKnown RBP16.57■□□□□ 0.24
AP000253.1-201ENST00000449339 INHBAP08476 426 aa16.57■□□□□ 0.24
AP000253.1-201ENST00000449339 TAC1P20366 129 aa16.57■□□□□ 0.24
AP000253.1-201ENST00000449339 FOXN2P32314 431 aa16.57■□□□□ 0.24
AP000253.1-201ENST00000449339 ARPP19P56211 112 aa16.57■□□□□ 0.24
AP000253.1-201ENST00000449339 PAFAH1B3Q15102 231 aaKnown RBP16.57■□□□□ 0.24
AP000253.1-201ENST00000449339 PDK1Q15118 436 aa16.57■□□□□ 0.24
AP000253.1-201ENST00000449339 PRKD1Q15139 912 aaPredicted RBP16.57■□□□□ 0.24
AP000253.1-201ENST00000449339 CTXN3Q4LDR2 81 aa16.57■□□□□ 0.24
AP000253.1-201ENST00000449339 PRPF39Q86UA1 669 aaKnown RBP16.57■□□□□ 0.24
AP000253.1-201ENST00000449339 NPAS4Q8IUM7 802 aa16.57■□□□□ 0.24
AP000253.1-201ENST00000449339 DQX1Q8TE96 717 aaKnown RBP16.57■□□□□ 0.24
AP000253.1-201ENST00000449339 P2RY11Q96G91 374 aa16.57■□□□□ 0.24
AP000253.1-201ENST00000449339 FERMT1Q9BQL6 677 aa16.57■□□□□ 0.24
AP000253.1-201ENST00000449339 RRN3Q9NYV6 651 aa16.57■□□□□ 0.24
AP000253.1-201ENST00000449339 NUDT5Q9UKK9 219 aa16.57■□□□□ 0.24
AP000253.1-201ENST00000449339 USP15Q9Y4E8 981 aaPredicted RBP16.57■□□□□ 0.24
AP000253.1-201ENST00000449339 MKI67P46013 3256 aaKnown RBP16.57■□□□□ 0.24
AP000253.1-201ENST00000449339 IQANK1A0A1B0GTG1 560 aa16.57■□□□□ 0.24
AP000253.1-201ENST00000449339 DCLK1O15075 740 aa16.57■□□□□ 0.24
AP000253.1-201ENST00000449339 STK10O94804 968 aaKnown RBP16.57■□□□□ 0.24
AP000253.1-201ENST00000449339 UPP2O95045 317 aa16.57■□□□□ 0.24
AP000253.1-201ENST00000449339 FSBPO95073 299 aa16.57■□□□□ 0.24
AP000253.1-201ENST00000449339 CPP00450 1065 aa16.57■□□□□ 0.24
AP000253.1-201ENST00000449339 C1QAP02745 245 aa16.57■□□□□ 0.24
AP000253.1-201ENST00000449339 GLUD2P49448 558 aa16.57■□□□□ 0.24
AP000253.1-201ENST00000449339 DCP1BQ8IZD4 617 aaKnown RBP16.57■□□□□ 0.24
AP000253.1-201ENST00000449339 ATAD1Q8NBU5 361 aa16.57■□□□□ 0.24
AP000253.1-201ENST00000449339 CCNYQ8ND76 341 aa16.57■□□□□ 0.24
AP000253.1-201ENST00000449339 GPR152Q8TDT2 470 aa16.57■□□□□ 0.24
AP000253.1-201ENST00000449339 APBB2Q92870 758 aa16.57■□□□□ 0.24
AP000253.1-201ENST00000449339 PRDM12Q9H4Q4 367 aa16.57■□□□□ 0.24
AP000253.1-201ENST00000449339 PLAC1Q9HBJ0 212 aa16.57■□□□□ 0.24
AP000253.1-201ENST00000449339 XAB2Q9HCS7 855 aaKnown RBP16.57■□□□□ 0.24
AP000253.1-201ENST00000449339 TTLL3Q9Y4R7 772 aa16.57■□□□□ 0.24
AP000253.1-201ENST00000449339 CCT8L1PA6NM43 557 aa16.56■□□□□ 0.24
AP000253.1-201ENST00000449339 RNF103O00237 685 aa16.56■□□□□ 0.24
AP000253.1-201ENST00000449339 PPP1R12AO14974 1030 aaPredicted RBP16.56■□□□□ 0.24
AP000253.1-201ENST00000449339 SOAT2O75908 522 aa16.56■□□□□ 0.24
AP000253.1-201ENST00000449339 ALDH2P05091 517 aa16.56■□□□□ 0.24
AP000253.1-201ENST00000449339 FDFT1P37268 417 aa16.56■□□□□ 0.24
AP000253.1-201ENST00000449339 GRIA1P42261 906 aa16.56■□□□□ 0.24
AP000253.1-201ENST00000449339 SEMA3BQ13214 749 aa16.56■□□□□ 0.24
AP000253.1-201ENST00000449339 SLC1A5Q15758 541 aa16.56■□□□□ 0.24
AP000253.1-201ENST00000449339 SPRED3Q2MJR0 410 aa16.56■□□□□ 0.24
AP000253.1-201ENST00000449339 ARL13BQ3SXY8 428 aa16.56■□□□□ 0.24
AP000253.1-201ENST00000449339 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.56■□□□□ 0.24
AP000253.1-201ENST00000449339 TAS1R1Q7RTX1 841 aa16.56■□□□□ 0.24
AP000253.1-201ENST00000449339 SCD5Q86SK9 330 aa16.56■□□□□ 0.24
AP000253.1-201ENST00000449339 COLGALT1Q8NBJ5 622 aa16.56■□□□□ 0.24
AP000253.1-201ENST00000449339 BCL7CQ8WUZ0 217 aaPredicted RBP16.56■□□□□ 0.24
AP000253.1-201ENST00000449339 SIGLEC10Q96LC7 697 aa16.56■□□□□ 0.24
AP000253.1-201ENST00000449339 TKTL2Q9H0I9 626 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms