RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 BNC1Q01954 994 aa29.39■■■□□ 2.3
CBX4-202ENST00000448310 GCNT1Q02742 428 aa29.39■■■□□ 2.3
CBX4-202ENST00000448310 MORC3Q14149 939 aa29.39■■■□□ 2.3
CBX4-202ENST00000448310 NAXDQ8IW45 347 aa29.39■■■□□ 2.3
CBX4-202ENST00000448310 TRIM59Q8IWR1 403 aa29.39■■■□□ 2.3
CBX4-202ENST00000448310 SCUBE3Q8IX30 993 aa29.39■■■□□ 2.3
CBX4-202ENST00000448310 DQX1Q8TE96 717 aaKnown RBP29.39■■■□□ 2.3
CBX4-202ENST00000448310 FCRL2Q96LA5 508 aaPredicted RBP29.39■■■□□ 2.3
CBX4-202ENST00000448310 PRICKLE1Q96MT3 831 aaPredicted RBP29.39■■■□□ 2.3
CBX4-202ENST00000448310 ZDHHC5Q9C0B5 715 aa29.39■■■□□ 2.3
CBX4-202ENST00000448310 MTG2Q9H4K7 406 aa29.39■■■□□ 2.3
CBX4-202ENST00000448310 ST7Q9NRC1 585 aa29.39■■■□□ 2.3
CBX4-202ENST00000448310 TMEM131Q92545 1883 aa29.39■■■□□ 2.3
CBX4-202ENST00000448310 BICDL2A1A5D9 508 aa29.38■■■□□ 2.29
CBX4-202ENST00000448310 POLR2EP19388 210 aaKnown RBP29.38■■■□□ 2.29
CBX4-202ENST00000448310 RING1Q06587 406 aa29.38■■■□□ 2.29
CBX4-202ENST00000448310 TRIP6Q15654 476 aaKnown RBP29.38■■■□□ 2.29
CBX4-202ENST00000448310 MPP7Q5T2T1 576 aa29.38■■■□□ 2.29
CBX4-202ENST00000448310 MFN1Q8IWA4 741 aa29.38■■■□□ 2.29
CBX4-202ENST00000448310 ADAM32Q8TC27 787 aa29.38■■■□□ 2.29
CBX4-202ENST00000448310 NAALADL1Q9UQQ1 740 aa29.38■■■□□ 2.29
CBX4-202ENST00000448310 WDFY3Q8IZQ1 3526 aa29.37■■■□□ 2.29
CBX4-202ENST00000448310 ZZEF1O43149 2961 aa29.37■■■□□ 2.29
CBX4-202ENST00000448310 ATP5BP06576 529 aaKnown RBP29.37■■■□□ 2.29
CBX4-202ENST00000448310 KRT5P13647 590 aa29.37■■■□□ 2.29
CBX4-202ENST00000448310 GPD2P43304 727 aa29.37■■■□□ 2.29
CBX4-202ENST00000448310 RPS14P62263 151 aaKnown RBP29.37■■■□□ 2.29
CBX4-202ENST00000448310 HNRNPDQ14103 355 aaKnown RBP29.37■■■□□ 2.29
CBX4-202ENST00000448310 DENND1BQ6P3S1 775 aa29.37■■■□□ 2.29
CBX4-202ENST00000448310 C1orf216Q8TAB5 229 aa29.37■■■□□ 2.29
CBX4-202ENST00000448310 FAM149B1Q96BN6 582 aa29.37■■■□□ 2.29
CBX4-202ENST00000448310 INTS2Q9H0H0 1204 aaKnown RBP29.37■■■□□ 2.29
CBX4-202ENST00000448310 GAREM1Q9H706 876 aa29.37■■■□□ 2.29
CBX4-202ENST00000448310 MSRB2Q9Y3D2 182 aa29.37■■■□□ 2.29
CBX4-202ENST00000448310 PCDHB9Q9Y5E1 797 aa29.37■■■□□ 2.29
CBX4-202ENST00000448310 IRAK2O43187 625 aa29.36■■■□□ 2.29
CBX4-202ENST00000448310 GADD45BO75293 160 aaPredicted RBP29.36■■■□□ 2.29
CBX4-202ENST00000448310 AFPP02771 609 aaKnown RBP29.36■■■□□ 2.29
CBX4-202ENST00000448310 RPS24P62847 133 aaKnown RBP29.36■■■□□ 2.29
CBX4-202ENST00000448310 FOXR2Q6PJQ5 311 aa29.36■■■□□ 2.29
CBX4-202ENST00000448310 HJURPQ8NCD3 748 aaPredicted RBP29.36■■■□□ 2.29
CBX4-202ENST00000448310 AZIN2Q96A70 460 aa29.36■■■□□ 2.29
CBX4-202ENST00000448310 LMLNQ96KR4 655 aa29.36■■■□□ 2.29
CBX4-202ENST00000448310 SRRTQ9BXP5 876 aaKnown RBP29.36■■■□□ 2.29
CBX4-202ENST00000448310 NUCKS1Q9H1E3 243 aaKnown RBP29.36■■■□□ 2.29
CBX4-202ENST00000448310 UTP18Q9Y5J1 556 aaKnown RBP eCLIP29.36■■■□□ 2.29
CBX4-202ENST00000448310 SPEGQ15772 3267 aa29.35■■■□□ 2.29
CBX4-202ENST00000448310 A0A1B0GVT2 93 aa29.35■■■□□ 2.29
CBX4-202ENST00000448310 H0Y626 953 aa29.35■■■□□ 2.29
CBX4-202ENST00000448310 TRIM16O95361 564 aa29.35■■■□□ 2.29
CBX4-202ENST00000448310 MOCS2O96007 188 aaPredicted RBP29.35■■■□□ 2.29
CBX4-202ENST00000448310 RDXP35241 583 aaKnown RBP29.35■■■□□ 2.29
CBX4-202ENST00000448310 PAK1Q13153 545 aa29.35■■■□□ 2.29
CBX4-202ENST00000448310 CARNMT1Q8N4J0 409 aa29.35■■■□□ 2.29
CBX4-202ENST00000448310 ZCCHC14Q8WYQ9 949 aaKnown RBP29.35■■■□□ 2.29
CBX4-202ENST00000448310 SERPINB11Q96P15 392 aa29.35■■■□□ 2.29
CBX4-202ENST00000448310 IRX2Q9BZI1 471 aaPredicted RBP29.35■■■□□ 2.29
CBX4-202ENST00000448310 CNTN6Q9UQ52 1028 aa29.35■■■□□ 2.29
CBX4-202ENST00000448310 FNDC3AQ9Y2H6 1198 aaKnown RBP29.35■■■□□ 2.29
CBX4-202ENST00000448310 TMEM8BA6NDV4 472 aa29.34■■■□□ 2.29
CBX4-202ENST00000448310 DNTTP04053 509 aa29.34■■■□□ 2.29
CBX4-202ENST00000448310 MATKP42679 507 aa29.34■■■□□ 2.29
CBX4-202ENST00000448310 RPL34P49207 117 aaKnown RBP29.34■■■□□ 2.29
CBX4-202ENST00000448310 CSNK1EP49674 416 aaKnown RBP29.34■■■□□ 2.29
CBX4-202ENST00000448310 ZNF423Q2M1K9 1284 aa29.34■■■□□ 2.29
CBX4-202ENST00000448310 HLA-BQ31612 363 aa29.34■■■□□ 2.29
CBX4-202ENST00000448310 SYPL2Q5VXT5 272 aa29.34■■■□□ 2.29
CBX4-202ENST00000448310 MMS22LQ6ZRQ5 1243 aa29.34■■■□□ 2.29
CBX4-202ENST00000448310 RAB44Q7Z6P3 723 aaPredicted RBP29.34■■■□□ 2.29
CBX4-202ENST00000448310 TAC4Q86UU9 113 aa29.34■■■□□ 2.29
CBX4-202ENST00000448310 CFAP52Q8N1V2 620 aa29.34■■■□□ 2.29
CBX4-202ENST00000448310 PNPLA1Q8N8W4 532 aa29.34■■■□□ 2.29
CBX4-202ENST00000448310 FIBINQ8TAL6 211 aa29.34■■■□□ 2.29
CBX4-202ENST00000448310 MYO19Q96H55 970 aa29.34■■■□□ 2.29
CBX4-202ENST00000448310 PCED1AQ9H1Q7 454 aa29.34■■■□□ 2.29
CBX4-202ENST00000448310 UBE2TQ9NPD8 197 aaPredicted RBP29.34■■■□□ 2.29
CBX4-202ENST00000448310 ACP6Q9NPH0 428 aa29.34■■■□□ 2.29
CBX4-202ENST00000448310 XPO7Q9UIA9 1087 aaKnown RBP29.34■■■□□ 2.29
CBX4-202ENST00000448310 INTS6Q9UL03 887 aaKnown RBP29.34■■■□□ 2.29
CBX4-202ENST00000448310 TLR6Q9Y2C9 796 aa29.34■■■□□ 2.29
CBX4-202ENST00000448310 ZBTB32Q9Y2Y4 487 aaPredicted RBP29.34■■■□□ 2.29
CBX4-202ENST00000448310 CABIN1Q9Y6J0 2220 aa29.34■■■□□ 2.29
CBX4-202ENST00000448310 SEMA4FO95754 770 aa29.33■■■□□ 2.29
CBX4-202ENST00000448310 CER1O95813 267 aa29.33■■■□□ 2.29
CBX4-202ENST00000448310 GNA14O95837 355 aa29.33■■■□□ 2.29
CBX4-202ENST00000448310 FTH1P19P0C7X4 201 aa29.33■■■□□ 2.29
CBX4-202ENST00000448310 C7P10643 843 aa29.33■■■□□ 2.29
CBX4-202ENST00000448310 CSKP41240 450 aa29.33■■■□□ 2.29
CBX4-202ENST00000448310 MARSP56192 900 aaKnown RBP29.33■■■□□ 2.29
CBX4-202ENST00000448310 SETD7Q8WTS6 366 aaKnown RBP29.33■■■□□ 2.29
CBX4-202ENST00000448310 SLC39A13Q96H72 371 aa29.33■■■□□ 2.29
CBX4-202ENST00000448310 DDX50Q9BQ39 737 aaKnown RBP29.33■■■□□ 2.29
CBX4-202ENST00000448310 BTBD1Q9H0C5 482 aa29.33■■■□□ 2.29
CBX4-202ENST00000448310 FBRSQ9HAH7 460 aa29.33■■■□□ 2.29
CBX4-202ENST00000448310 SUN2Q9UH99 717 aa29.33■■■□□ 2.29
CBX4-202ENST00000448310 CYTH4Q9UIA0 394 aa29.33■■■□□ 2.29
CBX4-202ENST00000448310 NYNRINQ9P2P1 1898 aaKnown RBP29.33■■■□□ 2.29
CBX4-202ENST00000448310 TP53BP1Q12888 1972 aaPredicted RBP29.33■■■□□ 2.29
CBX4-202ENST00000448310 FAM208BQ5VWN6 2430 aa29.32■■■□□ 2.28
CBX4-202ENST00000448310 TYW5A2RUC4 315 aaKnown RBP29.32■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms