RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 LRRC31Q6UY01 552 aa20.17■□□□□ 0.82
SGCE-207ENST00000447873 PCDH19Q8TAB3 1148 aa20.17■□□□□ 0.82
SGCE-207ENST00000447873 VANGL2Q9ULK5 521 aa20.17■□□□□ 0.82
SGCE-207ENST00000447873 TCRBV7S2A1N4TA0A589 114 aa20.17■□□□□ 0.82
SGCE-207ENST00000447873 E9PAM4 449 aa20.17■□□□□ 0.82
SGCE-207ENST00000447873 GREM1O60565 184 aa20.17■□□□□ 0.82
SGCE-207ENST00000447873 PRAMEF12O95522 483 aa20.17■□□□□ 0.82
SGCE-207ENST00000447873 LATS1O95835 1130 aa20.17■□□□□ 0.82
SGCE-207ENST00000447873 EPHB2P29323 1055 aa20.17■□□□□ 0.82
SGCE-207ENST00000447873 HTR7P34969 479 aa20.17■□□□□ 0.82
SGCE-207ENST00000447873 ADCY2Q08462 1091 aa20.17■□□□□ 0.82
SGCE-207ENST00000447873 SKIV2LQ15477 1246 aaKnown RBP20.17■□□□□ 0.82
SGCE-207ENST00000447873 ADGRF1Q5T601 910 aa20.17■□□□□ 0.82
SGCE-207ENST00000447873 NADSYN1Q6IA69 706 aa20.17■□□□□ 0.82
SGCE-207ENST00000447873 RWDD4Q6NW29 188 aaKnown RBP20.17■□□□□ 0.82
SGCE-207ENST00000447873 C14orf80Q86SX3 495 aa20.17■□□□□ 0.82
SGCE-207ENST00000447873 SMRP1Q8NCR6 262 aa20.17■□□□□ 0.82
SGCE-207ENST00000447873 MAIP1Q8WWC4 291 aa20.17■□□□□ 0.82
SGCE-207ENST00000447873 TBC1D31Q96DN5 1066 aa20.17■□□□□ 0.82
SGCE-207ENST00000447873 GUCD1Q96NT3 240 aa20.17■□□□□ 0.82
SGCE-207ENST00000447873 DDX50Q9BQ39 737 aaKnown RBP20.17■□□□□ 0.82
SGCE-207ENST00000447873 ARHGEF4Q9NR80 690 aa20.17■□□□□ 0.82
SGCE-207ENST00000447873 CD207Q9UJ71 328 aa20.17■□□□□ 0.82
SGCE-207ENST00000447873 ZNF510Q9Y2H8 683 aa20.17■□□□□ 0.82
SGCE-207ENST00000447873 GOLGA6L7A0A1B0GV03 622 aa20.16■□□□□ 0.82
SGCE-207ENST00000447873 F5H5T6 163 aa20.16■□□□□ 0.82
SGCE-207ENST00000447873 KRIT1O00522 736 aa20.16■□□□□ 0.82
SGCE-207ENST00000447873 APOL1O14791 398 aa20.16■□□□□ 0.82
SGCE-207ENST00000447873 SCAMP3O14828 347 aaKnown RBP20.16■□□□□ 0.82
SGCE-207ENST00000447873 TACR2P21452 398 aa20.16■□□□□ 0.82
SGCE-207ENST00000447873 AMPD1P23109 780 aa20.16■□□□□ 0.82
SGCE-207ENST00000447873 WEE1P30291 646 aa20.16■□□□□ 0.82
SGCE-207ENST00000447873 KLF1Q13351 362 aaPredicted RBP20.16■□□□□ 0.82
SGCE-207ENST00000447873 DPYSQ14117 519 aa20.16■□□□□ 0.82
SGCE-207ENST00000447873 FAM133BQ5BKY9 247 aaKnown RBP20.16■□□□□ 0.82
SGCE-207ENST00000447873 Q6ZNB5 142 aa20.16■□□□□ 0.82
SGCE-207ENST00000447873 HTR3DQ70Z44 454 aa20.16■□□□□ 0.82
SGCE-207ENST00000447873 PQLC3Q8N755 202 aa20.16■□□□□ 0.82
SGCE-207ENST00000447873 CEP112Q8N8E3 955 aa20.16■□□□□ 0.82
SGCE-207ENST00000447873 MNS1Q8NEH6 495 aa20.16■□□□□ 0.82
SGCE-207ENST00000447873 NECTIN4Q96NY8 510 aa20.16■□□□□ 0.82
SGCE-207ENST00000447873 PRMT1Q99873 361 aaKnown RBP20.16■□□□□ 0.82
SGCE-207ENST00000447873 AP1M1Q9BXS5 423 aa20.16■□□□□ 0.82
SGCE-207ENST00000447873 CDH7Q9ULB5 785 aa20.16■□□□□ 0.82
SGCE-207ENST00000447873 GOLGA6L10A0A0M3HER8 536 aa20.15■□□□□ 0.82
SGCE-207ENST00000447873 E2F8A0AVK6 867 aa20.15■□□□□ 0.82
SGCE-207ENST00000447873 ZFXP17010 805 aaPredicted RBP20.15■□□□□ 0.82
SGCE-207ENST00000447873 FAM78AQ5JUQ0 283 aa20.15■□□□□ 0.82
SGCE-207ENST00000447873 MANEALQ5VSG8 457 aa20.15■□□□□ 0.82
SGCE-207ENST00000447873 FBXL22Q6P050 247 aa20.15■□□□□ 0.82
SGCE-207ENST00000447873 BBS12Q6ZW61 710 aa20.15■□□□□ 0.82
SGCE-207ENST00000447873 CELF5Q8N6W0 485 aaKnown RBP20.15■□□□□ 0.82
SGCE-207ENST00000447873 PPM1EQ8WY54 764 aa20.15■□□□□ 0.82
SGCE-207ENST00000447873 CARD6Q9BX69 1037 aa20.15■□□□□ 0.82
SGCE-207ENST00000447873 CATSPERBQ9H7T0 1116 aa20.15■□□□□ 0.82
SGCE-207ENST00000447873 KIF9Q9HAQ2 790 aa20.15■□□□□ 0.82
SGCE-207ENST00000447873 PRDM16Q9HAZ2 1276 aa20.15■□□□□ 0.82
SGCE-207ENST00000447873 STOML2Q9UJZ1 356 aa20.15■□□□□ 0.82
SGCE-207ENST00000447873 DOCK4Q8N1I0 1966 aa20.15■□□□□ 0.82
SGCE-207ENST00000447873 H3BQ06 376 aaPredicted RBP20.14■□□□□ 0.81
SGCE-207ENST00000447873 FGF10O15520 208 aaPredicted RBP20.14■□□□□ 0.81
SGCE-207ENST00000447873 SLC6A4P31645 630 aa20.14■□□□□ 0.81
SGCE-207ENST00000447873 SLC9A4Q6AI14 798 aa20.14■□□□□ 0.81
SGCE-207ENST00000447873 RFWD3Q6PCD5 774 aa20.14■□□□□ 0.81
SGCE-207ENST00000447873 ZNF683Q8IZ20 524 aa20.14■□□□□ 0.81
SGCE-207ENST00000447873 LGI2Q8N0V4 545 aa20.14■□□□□ 0.81
SGCE-207ENST00000447873 SMARCD2Q92925 531 aa20.14■□□□□ 0.81
SGCE-207ENST00000447873 ASB16Q96NS5 453 aa20.14■□□□□ 0.81
SGCE-207ENST00000447873 RPRD1AQ96P16 312 aaPredicted RBP20.14■□□□□ 0.81
SGCE-207ENST00000447873 PPARGC1AQ9UBK2 798 aaKnown RBP20.14■□□□□ 0.81
SGCE-207ENST00000447873 DENND4AQ7Z401 1863 aa20.14■□□□□ 0.81
SGCE-207ENST00000447873 IGLV3-10A0A075B6K4 115 aa20.13■□□□□ 0.81
SGCE-207ENST00000447873 CTAGE15A4D2H0 777 aa20.13■□□□□ 0.81
SGCE-207ENST00000447873 CTAGE8P0CG41 777 aa20.13■□□□□ 0.81
SGCE-207ENST00000447873 TCF3P15923 654 aa20.13■□□□□ 0.81
SGCE-207ENST00000447873 ERCC2P18074 760 aa20.13■□□□□ 0.81
SGCE-207ENST00000447873 KCNA5P22460 613 aa20.13■□□□□ 0.81
SGCE-207ENST00000447873 HOXC13P31276 330 aa20.13■□□□□ 0.81
SGCE-207ENST00000447873 GBP2P32456 591 aaPredicted RBP20.13■□□□□ 0.81
SGCE-207ENST00000447873 ZNF77Q15935 545 aa20.13■□□□□ 0.81
SGCE-207ENST00000447873 ZNF572Q7Z3I7 529 aaPredicted RBP20.13■□□□□ 0.81
SGCE-207ENST00000447873 CTAGE6Q86UF2 777 aa20.13■□□□□ 0.81
SGCE-207ENST00000447873 BBS7Q8IWZ6 715 aa20.13■□□□□ 0.81
SGCE-207ENST00000447873 CTAGE4Q8IX94 777 aa20.13■□□□□ 0.81
SGCE-207ENST00000447873 ZDHHC14Q8IZN3 488 aa20.13■□□□□ 0.81
SGCE-207ENST00000447873 SPATA4Q8NEY3 305 aa20.13■□□□□ 0.81
SGCE-207ENST00000447873 IGSF8Q969P0 613 aa20.13■□□□□ 0.81
SGCE-207ENST00000447873 ZYG11BQ9C0D3 744 aa20.13■□□□□ 0.81
SGCE-207ENST00000447873 POMKQ9H5K3 350 aa20.13■□□□□ 0.81
SGCE-207ENST00000447873 NEU3Q9UQ49 428 aa20.13■□□□□ 0.81
SGCE-207ENST00000447873 NR2E1Q9Y466 385 aa20.13■□□□□ 0.81
SGCE-207ENST00000447873 USP15Q9Y4E8 981 aaPredicted RBP20.13■□□□□ 0.81
SGCE-207ENST00000447873 DOCK8Q8NF50 2099 aa20.13■□□□□ 0.81
SGCE-207ENST00000447873 TGM2P21980 687 aa20.12■□□□□ 0.81
SGCE-207ENST00000447873 CHKAP35790 457 aa20.12■□□□□ 0.81
SGCE-207ENST00000447873 USP4Q13107 963 aa20.12■□□□□ 0.81
SGCE-207ENST00000447873 RABGAP1LQ5R372 815 aa20.12■□□□□ 0.81
SGCE-207ENST00000447873 TMCO3Q6UWJ1 677 aa20.12■□□□□ 0.81
SGCE-207ENST00000447873 PLD5Q8N7P1 536 aa20.12■□□□□ 0.81
SGCE-207ENST00000447873 TTC13Q8NBP0 860 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms