RNA–Protein interactions for RNA: ENST00000447734.5

PMS1-216, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-216ENST00000447734 ADAM8P78325 824 aa4.09□□□□□ -1.75
PMS1-216ENST00000447734 PRAMEP78395 509 aa4.09□□□□□ -1.75
PMS1-216ENST00000447734 SLFN5Q08AF3 891 aa4.09□□□□□ -1.75
PMS1-216ENST00000447734 BFSP2Q13515 415 aa4.09□□□□□ -1.75
PMS1-216ENST00000447734 E2F2Q14209 437 aa4.09□□□□□ -1.75
PMS1-216ENST00000447734 BMT2Q1RMZ1 405 aa4.09□□□□□ -1.75
PMS1-216ENST00000447734 AAK1Q2M2I8 961 aa4.09□□□□□ -1.75
PMS1-216ENST00000447734 SLC9B1Q4ZJI4 515 aa4.09□□□□□ -1.75
PMS1-216ENST00000447734 NOMO2Q5JPE7 1267 aa4.09□□□□□ -1.75
PMS1-216ENST00000447734 ARHGAP40Q5TG30 622 aa4.09□□□□□ -1.75
PMS1-216ENST00000447734 ADALQ6DHV7 355 aa4.09□□□□□ -1.75
PMS1-216ENST00000447734 KRT80Q6KB66 452 aa4.09□□□□□ -1.75
PMS1-216ENST00000447734 CCDC144NLQ6NUI1 221 aa4.09□□□□□ -1.75
PMS1-216ENST00000447734 CDC73Q6P1J9 531 aa4.09□□□□□ -1.75
PMS1-216ENST00000447734 MTFR2Q6P444 385 aa4.09□□□□□ -1.75
PMS1-216ENST00000447734 USP30Q70CQ3 517 aa4.09□□□□□ -1.75
PMS1-216ENST00000447734 RRM2BQ7LG56 351 aa4.09□□□□□ -1.75
PMS1-216ENST00000447734 GALNT7Q86SF2 657 aa4.09□□□□□ -1.75
PMS1-216ENST00000447734 XYLT1Q86Y38 959 aa4.09□□□□□ -1.75
PMS1-216ENST00000447734 DNAAF5Q86Y56 855 aa4.09□□□□□ -1.75
PMS1-216ENST00000447734 C1QL4Q86Z23 238 aa4.09□□□□□ -1.75
PMS1-216ENST00000447734 REXO1L1PQ8IX06 675 aa4.09□□□□□ -1.75
PMS1-216ENST00000447734 CCAR2Q8N163 923 aaKnown RBP4.09□□□□□ -1.75
PMS1-216ENST00000447734 SYNE4Q8N205 404 aa4.09□□□□□ -1.75
PMS1-216ENST00000447734 TEX9Q8N6V9 391 aa4.09□□□□□ -1.75
PMS1-216ENST00000447734 C11orf44Q8N8P7 122 aa4.09□□□□□ -1.75
PMS1-216ENST00000447734 POC5Q8NA72 575 aa4.09□□□□□ -1.75
PMS1-216ENST00000447734 ZBTB8BQ8NAP8 495 aaPredicted RBP4.09□□□□□ -1.75
PMS1-216ENST00000447734 SPC24Q8NBT2 197 aa4.09□□□□□ -1.75
PMS1-216ENST00000447734 NSUN7Q8NE18 718 aaKnown RBP4.09□□□□□ -1.75
PMS1-216ENST00000447734 NUDT10Q8NFP7 164 aa4.09□□□□□ -1.75
PMS1-216ENST00000447734 OR6J1Q8NGC5 347 aa4.09□□□□□ -1.75
PMS1-216ENST00000447734 DEPDC1BQ8WUY9 529 aa4.09□□□□□ -1.75
PMS1-216ENST00000447734 FAM168AQ92567 244 aa4.09□□□□□ -1.75
PMS1-216ENST00000447734 SMARCE1Q969G3 411 aa4.09□□□□□ -1.75
PMS1-216ENST00000447734 KLHL29Q96CT2 875 aa4.09□□□□□ -1.75
PMS1-216ENST00000447734 RMDN1Q96DB5 314 aa4.09□□□□□ -1.75
PMS1-216ENST00000447734 NUDT11Q96G61 164 aa4.09□□□□□ -1.75
PMS1-216ENST00000447734 FAR2Q96K12 515 aa4.09□□□□□ -1.75
PMS1-216ENST00000447734 CCDC43Q96MW1 224 aaKnown RBP4.09□□□□□ -1.75
PMS1-216ENST00000447734 ABHD1Q96SE0 405 aa4.09□□□□□ -1.75
PMS1-216ENST00000447734 TSPAN18Q96SJ8 248 aa4.09□□□□□ -1.75
PMS1-216ENST00000447734 CITED2Q99967 270 aaPredicted RBP4.09□□□□□ -1.75
PMS1-216ENST00000447734 PTDSS2Q9BVG9 487 aa4.09□□□□□ -1.75
PMS1-216ENST00000447734 NRDE2Q9H7Z3 1164 aa4.09□□□□□ -1.75
PMS1-216ENST00000447734 PDE11AQ9HCR9 933 aa4.09□□□□□ -1.75
PMS1-216ENST00000447734 IL23AQ9NPF7 189 aa4.09□□□□□ -1.75
PMS1-216ENST00000447734 TLR8Q9NR97 1041 aaKnown RBP4.09□□□□□ -1.75
PMS1-216ENST00000447734 GIMAP4Q9NUV9 329 aa4.09□□□□□ -1.75
PMS1-216ENST00000447734 C5AR2Q9P296 337 aa4.09□□□□□ -1.75
PMS1-216ENST00000447734 MARCH4Q9P2E8 410 aaPredicted RBP4.09□□□□□ -1.75
PMS1-216ENST00000447734 RIMKLBQ9ULI2 386 aa4.09□□□□□ -1.75
PMS1-216ENST00000447734 COL15A1P39059 1388 aa4.09□□□□□ -1.75
PMS1-216ENST00000447734 CCDC195A0A1B0GUA6 201 aa4.08□□□□□ -1.76
PMS1-216ENST00000447734 FRMD3A2A2Y4 597 aa4.08□□□□□ -1.76
PMS1-216ENST00000447734 GOLGA6L6A8MZA4 724 aa4.08□□□□□ -1.76
PMS1-216ENST00000447734 HOXA3O43365 443 aaPredicted RBP4.08□□□□□ -1.76
PMS1-216ENST00000447734 SPATA31D3P0C874 917 aa4.08□□□□□ -1.76
PMS1-216ENST00000447734 MYBL1P10243 752 aa4.08□□□□□ -1.76
PMS1-216ENST00000447734 ATF2P15336 505 aa4.08□□□□□ -1.76
PMS1-216ENST00000447734 TLX1P31314 330 aaPredicted RBP4.08□□□□□ -1.76
PMS1-216ENST00000447734 VIPR1P32241 457 aa4.08□□□□□ -1.76
PMS1-216ENST00000447734 TTKP33981 857 aa4.08□□□□□ -1.76
PMS1-216ENST00000447734 IL13P35225 146 aa4.08□□□□□ -1.76
PMS1-216ENST00000447734 BUD31P41223 144 aaPredicted RBP4.08□□□□□ -1.76
PMS1-216ENST00000447734 NRIP1P48552 1158 aa4.08□□□□□ -1.76
PMS1-216ENST00000447734 RRP1P56182 461 aaKnown RBP4.08□□□□□ -1.76
PMS1-216ENST00000447734 EIF4A1P60842 406 aaKnown RBP4.08□□□□□ -1.76
PMS1-216ENST00000447734 RPL15P61313 204 aaKnown RBP4.08□□□□□ -1.76
PMS1-216ENST00000447734 OLR1P78380 273 aa4.08□□□□□ -1.76
PMS1-216ENST00000447734 TIAL1Q01085 375 aaKnown RBP eCLIP4.08□□□□□ -1.763e-9■■■■■ 32.4
PMS1-216ENST00000447734 USP10Q14694 798 aaKnown RBP4.08□□□□□ -1.76
PMS1-216ENST00000447734 SLMAPQ14BN4 828 aa4.08□□□□□ -1.76
PMS1-216ENST00000447734 CLCA4Q14CN2 919 aa4.08□□□□□ -1.76
PMS1-216ENST00000447734 ACOX1Q15067 660 aa4.08□□□□□ -1.76
PMS1-216ENST00000447734 E2F5Q15329 346 aa4.08□□□□□ -1.76
PMS1-216ENST00000447734 ZNF674Q2M3X9 581 aa4.08□□□□□ -1.76
PMS1-216ENST00000447734 FAM214AQ32MH5 1076 aa4.08□□□□□ -1.76
PMS1-216ENST00000447734 ZMAT1Q5H9K5 638 aa4.08□□□□□ -1.76
PMS1-216ENST00000447734 C9orf152Q5JTZ5 239 aa4.08□□□□□ -1.76
PMS1-216ENST00000447734 CCDC158Q5M9N0 1113 aa4.08□□□□□ -1.76
PMS1-216ENST00000447734 KRTAP5-3Q6L8H2 238 aa4.08□□□□□ -1.76
PMS1-216ENST00000447734 RGS7BPQ6MZT1 257 aaPredicted RBP4.08□□□□□ -1.76
PMS1-216ENST00000447734 CNSTQ6PJW8 725 aa4.08□□□□□ -1.76
PMS1-216ENST00000447734 SLC30A9Q6PML9 568 aa4.08□□□□□ -1.76
PMS1-216ENST00000447734 SLC2A7Q6PXP3 512 aa4.08□□□□□ -1.76
PMS1-216ENST00000447734 SARM1Q6SZW1 724 aa4.08□□□□□ -1.76
PMS1-216ENST00000447734 MTHFD1LQ6UB35 978 aa4.08□□□□□ -1.76
PMS1-216ENST00000447734 PET117Q6UWS5 81 aa4.08□□□□□ -1.76
PMS1-216ENST00000447734 LCNL1Q6ZST4 164 aa4.08□□□□□ -1.76
PMS1-216ENST00000447734 SPATA31D4Q6ZUB0 917 aa4.08□□□□□ -1.76
PMS1-216ENST00000447734 BTN2A1Q7KYR7 527 aa4.08□□□□□ -1.76
PMS1-216ENST00000447734 CCDC186Q7Z3E2 898 aa4.08□□□□□ -1.76
PMS1-216ENST00000447734 ADGRA1Q86SQ6 560 aa4.08□□□□□ -1.76
PMS1-216ENST00000447734 ATG4DQ86TL0 474 aaPredicted RBP4.08□□□□□ -1.76
PMS1-216ENST00000447734 LCA5Q86VQ0 697 aa4.08□□□□□ -1.76
PMS1-216ENST00000447734 METTL23Q86XA0 190 aa4.08□□□□□ -1.76
PMS1-216ENST00000447734 LINC00346Q8IVM7 164 aa4.08□□□□□ -1.76
PMS1-216ENST00000447734 IGDCC3Q8IVU1 814 aa4.08□□□□□ -1.76
PMS1-216ENST00000447734 BRSK2Q8IWQ3 736 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms