RNA–Protein interactions for RNA: ENST00000447683.2

OTUB1-204, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 2

Gene OTUB1, Length 2,315 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-204ENST00000447683 SLC24A3Q9HC58 644 aa16.76■□□□□ 0.27
OTUB1-204ENST00000447683 TDRD15B5MCY1 1934 aaKnown RBP16.76■□□□□ 0.27
OTUB1-204ENST00000447683 COPEO14579 308 aa16.76■□□□□ 0.27
OTUB1-204ENST00000447683 KRT38O76015 456 aa16.76■□□□□ 0.27
OTUB1-204ENST00000447683 HCAR3P49019 387 aa16.76■□□□□ 0.27
OTUB1-204ENST00000447683 SERPINB9P50453 376 aa16.76■□□□□ 0.27
OTUB1-204ENST00000447683 CACNA2D1P54289 1103 aa16.76■□□□□ 0.27
OTUB1-204ENST00000447683 AP1B1Q10567 949 aa16.76■□□□□ 0.27
OTUB1-204ENST00000447683 WASHC5Q12768 1159 aa16.76■□□□□ 0.27
OTUB1-204ENST00000447683 PARP6Q2NL67 630 aa16.76■□□□□ 0.27
OTUB1-204ENST00000447683 RGMBQ6NW40 437 aa16.76■□□□□ 0.27
OTUB1-204ENST00000447683 DRAXINQ8NBI3 349 aaPredicted RBP16.76■□□□□ 0.27
OTUB1-204ENST00000447683 SLC7A14Q8TBB6 771 aa16.76■□□□□ 0.27
OTUB1-204ENST00000447683 ERP27Q96DN0 273 aa16.76■□□□□ 0.27
OTUB1-204ENST00000447683 STAMBPL1Q96FJ0 436 aa16.76■□□□□ 0.27
OTUB1-204ENST00000447683 KCNK16Q96T55 309 aa16.76■□□□□ 0.27
OTUB1-204ENST00000447683 SUDS3Q9H7L9 328 aaPredicted RBP16.76■□□□□ 0.27
OTUB1-204ENST00000447683 RRN3Q9NYV6 651 aa16.76■□□□□ 0.27
OTUB1-204ENST00000447683 FBXW11Q9UKB1 542 aa16.76■□□□□ 0.27
OTUB1-204ENST00000447683 TIMM13Q9Y5L4 95 aaPredicted RBP16.76■□□□□ 0.27
OTUB1-204ENST00000447683 HMX2A2RU54 273 aa16.75■□□□□ 0.27
OTUB1-204ENST00000447683 CAPN9O14815 690 aa16.75■□□□□ 0.27
OTUB1-204ENST00000447683 GPR182O15218 404 aa16.75■□□□□ 0.27
OTUB1-204ENST00000447683 ZNF189O75820 626 aaPredicted RBP16.75■□□□□ 0.27
OTUB1-204ENST00000447683 ATP5HO75947 161 aa16.75■□□□□ 0.27
OTUB1-204ENST00000447683 CTSHP09668 335 aa16.75■□□□□ 0.27
OTUB1-204ENST00000447683 TROVE2P10155 538 aaKnown RBP eCLIP16.75■□□□□ 0.27
OTUB1-204ENST00000447683 SERPINB4P48594 390 aa16.75■□□□□ 0.27
OTUB1-204ENST00000447683 SCNN1GP51170 649 aa16.75■□□□□ 0.27
OTUB1-204ENST00000447683 RABGGTBP53611 331 aa16.75■□□□□ 0.27
OTUB1-204ENST00000447683 UPP1Q16831 310 aa16.75■□□□□ 0.27
OTUB1-204ENST00000447683 CDHR3Q6ZTQ4 885 aa16.75■□□□□ 0.27
OTUB1-204ENST00000447683 BHLHA9Q7RTU4 235 aa16.75■□□□□ 0.27
OTUB1-204ENST00000447683 PDCD7Q8N8D1 485 aaKnown RBP16.75■□□□□ 0.27
OTUB1-204ENST00000447683 ZNF513Q8N8E2 541 aaPredicted RBP16.75■□□□□ 0.27
OTUB1-204ENST00000447683 AGO3Q9H9G7 860 aaKnown RBP16.75■□□□□ 0.27
OTUB1-204ENST00000447683 CSNK1G1Q9HCP0 422 aa16.75■□□□□ 0.27
OTUB1-204ENST00000447683 ANLNQ9NQW6 1124 aa16.75■□□□□ 0.27
OTUB1-204ENST00000447683 TXLNGQ9NUQ3 528 aa16.75■□□□□ 0.27
OTUB1-204ENST00000447683 IGSF9Q9P2J2 1179 aa16.75■□□□□ 0.27
OTUB1-204ENST00000447683 PLLPQ9Y342 182 aa16.75■□□□□ 0.27
OTUB1-204ENST00000447683 RAD54BQ9Y620 910 aa16.75■□□□□ 0.27
OTUB1-204ENST00000447683 SDR42E2A6NKP2 422 aa16.75■□□□□ 0.27
OTUB1-204ENST00000447683 FAM72CH0Y354 149 aa16.75■□□□□ 0.27
OTUB1-204ENST00000447683 I6L893 689 aaPredicted RBP16.75■□□□□ 0.27
OTUB1-204ENST00000447683 KLF11O14901 512 aa16.75■□□□□ 0.27
OTUB1-204ENST00000447683 HGSO14964 777 aaPredicted RBP16.75■□□□□ 0.27
OTUB1-204ENST00000447683 LTFP02788 710 aa16.75■□□□□ 0.27
OTUB1-204ENST00000447683 RPLP2P05387 115 aaKnown RBP16.75■□□□□ 0.27
OTUB1-204ENST00000447683 EZRP15311 586 aaKnown RBP16.75■□□□□ 0.27
OTUB1-204ENST00000447683 TIGD5Q53EQ6 642 aa16.75■□□□□ 0.27
OTUB1-204ENST00000447683 PLEKHG4Q58EX7 1191 aa16.75■□□□□ 0.27
OTUB1-204ENST00000447683 FAM72AQ5TYM5 149 aa16.75■□□□□ 0.27
OTUB1-204ENST00000447683 FAM72DQ6L9T8 149 aa16.75■□□□□ 0.27
OTUB1-204ENST00000447683 FAM72BQ86X60 149 aa16.75■□□□□ 0.27
OTUB1-204ENST00000447683 SMARCD1Q96GM5 515 aa16.75■□□□□ 0.27
OTUB1-204ENST00000447683 TSSK1BQ9BXA7 367 aa16.75■□□□□ 0.27
OTUB1-204ENST00000447683 NPHS2Q9NP85 383 aa16.75■□□□□ 0.27
OTUB1-204ENST00000447683 KANSL3Q9P2N6 904 aa16.75■□□□□ 0.27
OTUB1-204ENST00000447683 PTPRDP23468 1912 aa16.74■□□□□ 0.27
OTUB1-204ENST00000447683 ZNF623O75123 536 aa16.74■□□□□ 0.27
OTUB1-204ENST00000447683 TGDSO95455 350 aa16.74■□□□□ 0.27
OTUB1-204ENST00000447683 ATP6V1G2O95670 118 aa16.74■□□□□ 0.27
OTUB1-204ENST00000447683 PGK1P00558 417 aa16.74■□□□□ 0.27
OTUB1-204ENST00000447683 SLC10A3P09131 477 aa16.74■□□□□ 0.27
OTUB1-204ENST00000447683 USP17L7P0C7H9 530 aa16.74■□□□□ 0.27
OTUB1-204ENST00000447683 ERCC2P18074 760 aa16.74■□□□□ 0.27
OTUB1-204ENST00000447683 PCSK1P29120 753 aa16.74■□□□□ 0.27
OTUB1-204ENST00000447683 MAGEA8P43361 318 aa16.74■□□□□ 0.27
OTUB1-204ENST00000447683 CRHR2Q13324 411 aa16.74■□□□□ 0.27
OTUB1-204ENST00000447683 TIFABQ6ZNK6 161 aa16.74■□□□□ 0.27
OTUB1-204ENST00000447683 NLRP9Q7RTR0 991 aa16.74■□□□□ 0.27
OTUB1-204ENST00000447683 CCNJLQ8IV13 435 aa16.74■□□□□ 0.27
OTUB1-204ENST00000447683 ZNF567Q8N184 647 aa16.74■□□□□ 0.27
OTUB1-204ENST00000447683 NETO2Q8NC67 525 aa16.74■□□□□ 0.27
OTUB1-204ENST00000447683 ARNTL2Q8WYA1 636 aa16.74■□□□□ 0.27
OTUB1-204ENST00000447683 TTC17Q96AE7 1141 aa16.74■□□□□ 0.27
OTUB1-204ENST00000447683 RTP3Q9BQQ7 232 aa16.74■□□□□ 0.27
OTUB1-204ENST00000447683 ALG13Q9NP73 1137 aaKnown RBP16.74■□□□□ 0.27
OTUB1-204ENST00000447683 NUP205Q92621 2012 aa16.74■□□□□ 0.27
OTUB1-204ENST00000447683 WDR27A2RRH5 827 aa16.74■□□□□ 0.27
OTUB1-204ENST00000447683 CASTOR2A6NHX0 329 aa16.74■□□□□ 0.27
OTUB1-204ENST00000447683 CNTFP26441 200 aa16.74■□□□□ 0.27
OTUB1-204ENST00000447683 PSMB4P28070 264 aa16.74■□□□□ 0.27
OTUB1-204ENST00000447683 CCNHP51946 323 aaPredicted RBP16.74■□□□□ 0.27
OTUB1-204ENST00000447683 PDZD4Q76G19 769 aaPredicted RBP16.74■□□□□ 0.27
OTUB1-204ENST00000447683 MARK2Q7KZI7 788 aaKnown RBP16.74■□□□□ 0.27
OTUB1-204ENST00000447683 SAPCD2Q86UD0 394 aa16.74■□□□□ 0.27
OTUB1-204ENST00000447683 TP53INP2Q8IXH6 220 aa16.74■□□□□ 0.27
OTUB1-204ENST00000447683 CCNYQ8ND76 341 aa16.74■□□□□ 0.27
OTUB1-204ENST00000447683 PAAF1Q9BRP4 392 aa16.74■□□□□ 0.27
OTUB1-204ENST00000447683 IQCGQ9H095 443 aaKnown RBP16.74■□□□□ 0.27
OTUB1-204ENST00000447683 IRAK4Q9NWZ3 460 aa16.74■□□□□ 0.27
OTUB1-204ENST00000447683 F9P00740 461 aa16.73■□□□□ 0.27
OTUB1-204ENST00000447683 AMHP03971 560 aa16.73■□□□□ 0.27
OTUB1-204ENST00000447683 NCAM1P13591 858 aa16.73■□□□□ 0.27
OTUB1-204ENST00000447683 NIPAL4Q0D2K0 466 aa16.73■□□□□ 0.27
OTUB1-204ENST00000447683 BMPR2Q13873 1038 aa16.73■□□□□ 0.27
OTUB1-204ENST00000447683 FAM171BQ6P995 826 aa16.73■□□□□ 0.27
OTUB1-204ENST00000447683 KIF2BQ8N4N8 673 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms