RNA–Protein interactions for RNA: ENST00000447463.5

HDAC7-215, Transcript of histone deacetylase 7, human

TSL 4

Gene HDAC7, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC7-215	ENST00000447463	METTL14	Q9HCE5	456 aa	Known RBP	13.73	□□□□□ -0.21
HDAC7-215	ENST00000447463	PRSS16	Q9NQE7	514 aa		13.73	□□□□□ -0.21
HDAC7-215	ENST00000447463	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	13.73	□□□□□ -0.21
HDAC7-215	ENST00000447463	PCDHB4	Q9Y5E5	795 aa		13.73	□□□□□ -0.21
HDAC7-215	ENST00000447463	PCDHGB2	Q9Y5G2	931 aa		13.73	□□□□□ -0.21
HDAC7-215	ENST00000447463	PTPRB	P23467	1997 aa		13.72	□□□□□ -0.21
HDAC7-215	ENST00000447463	PLXNB3	Q9ULL4	1909 aa		13.72	□□□□□ -0.21
HDAC7-215	ENST00000447463	APC2	O95996	2303 aa		13.72	□□□□□ -0.21
HDAC7-215	ENST00000447463		A0A1B0GVT2	93 aa		13.72	□□□□□ -0.21
HDAC7-215	ENST00000447463	TRIM49B	A6NDI0	452 aa		13.72	□□□□□ -0.21
HDAC7-215	ENST00000447463	GOLGA6L4	A6NEF3	574 aa		13.72	□□□□□ -0.21
HDAC7-215	ENST00000447463	TAF4	O00268	1085 aa		13.72	□□□□□ -0.21
HDAC7-215	ENST00000447463	PIK3R2	O00459	728 aa		13.72	□□□□□ -0.21
HDAC7-215	ENST00000447463	PMM2	O15305	246 aa		13.72	□□□□□ -0.21
HDAC7-215	ENST00000447463	FLRT2	O43155	660 aa		13.72	□□□□□ -0.21
HDAC7-215	ENST00000447463	TBL1X	O60907	577 aa		13.72	□□□□□ -0.21
HDAC7-215	ENST00000447463	GABBR2	O75899	941 aa		13.72	□□□□□ -0.21
HDAC7-215	ENST00000447463	LTF	P02788	710 aa		13.72	□□□□□ -0.21
HDAC7-215	ENST00000447463	CD70	P32970	193 aa		13.72	□□□□□ -0.21
HDAC7-215	ENST00000447463	RGS7	P49802	495 aa		13.72	□□□□□ -0.21
HDAC7-215	ENST00000447463	RPS14	P62263	151 aa	Known RBP	13.72	□□□□□ -0.21
HDAC7-215	ENST00000447463	RING1	Q06587	406 aa		13.72	□□□□□ -0.21
HDAC7-215	ENST00000447463	SCAP	Q12770	1279 aa		13.72	□□□□□ -0.21
HDAC7-215	ENST00000447463	SUZ12	Q15022	739 aa	Known RBP	13.72	□□□□□ -0.21
HDAC7-215	ENST00000447463	STIL	Q15468	1287 aa		13.72	□□□□□ -0.21
HDAC7-215	ENST00000447463	TEAD4	Q15561	434 aa		13.72	□□□□□ -0.21
HDAC7-215	ENST00000447463	CNGA2	Q16280	664 aa		13.72	□□□□□ -0.21
HDAC7-215	ENST00000447463	TTC31	Q49AM3	519 aa	Predicted RBP	13.72	□□□□□ -0.21
HDAC7-215	ENST00000447463	FAM133B	Q5BKY9	247 aa	Known RBP	13.72	□□□□□ -0.21
HDAC7-215	ENST00000447463	DBX2	Q6ZNG2	339 aa		13.72	□□□□□ -0.21
HDAC7-215	ENST00000447463	MFN1	Q8IWA4	741 aa		13.72	□□□□□ -0.21
HDAC7-215	ENST00000447463	BAHD1	Q8TBE0	780 aa	Predicted RBP	13.72	□□□□□ -0.21
HDAC7-215	ENST00000447463	WFDC5	Q8TCV5	224 aa		13.72	□□□□□ -0.21
HDAC7-215	ENST00000447463	GOLGA1	Q92805	767 aa		13.72	□□□□□ -0.21
HDAC7-215	ENST00000447463	SMARCE1	Q969G3	411 aa		13.72	□□□□□ -0.21
HDAC7-215	ENST00000447463	AZIN2	Q96A70	460 aa		13.72	□□□□□ -0.21
HDAC7-215	ENST00000447463	NT5C1B	Q96P26	610 aa		13.72	□□□□□ -0.21
HDAC7-215	ENST00000447463	CDC6	Q99741	560 aa		13.72	□□□□□ -0.21
HDAC7-215	ENST00000447463	SGK2	Q9HBY8	427 aa		13.72	□□□□□ -0.21
HDAC7-215	ENST00000447463	TM9SF3	Q9HD45	589 aa		13.72	□□□□□ -0.21
HDAC7-215	ENST00000447463	OSGEP	Q9NPF4	335 aa		13.72	□□□□□ -0.21
HDAC7-215	ENST00000447463	KIAA1522	Q9P206	1035 aa	Predicted RBP	13.72	□□□□□ -0.21
HDAC7-215	ENST00000447463	SUN2	Q9UH99	717 aa		13.72	□□□□□ -0.21
HDAC7-215	ENST00000447463	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	13.72	□□□□□ -0.21
HDAC7-215	ENST00000447463	SLCO1B1	Q9Y6L6	691 aa		13.72	□□□□□ -0.21
HDAC7-215	ENST00000447463	TMEM131	Q92545	1883 aa		13.72	□□□□□ -0.21
HDAC7-215	ENST00000447463	GOLGA6L7	A0A1B0GV03	622 aa		13.71	□□□□□ -0.21
HDAC7-215	ENST00000447463		M0QYV0	167 aa		13.71	□□□□□ -0.21
HDAC7-215	ENST00000447463	ACSL4	O60488	711 aa		13.71	□□□□□ -0.21
HDAC7-215	ENST00000447463	FBXO21	O94952	628 aa		13.71	□□□□□ -0.21
HDAC7-215	ENST00000447463	SLC6A4	P31645	630 aa		13.71	□□□□□ -0.21
HDAC7-215	ENST00000447463	GRIA4	P48058	902 aa		13.71	□□□□□ -0.21
HDAC7-215	ENST00000447463	TBX4	P57082	545 aa		13.71	□□□□□ -0.21
HDAC7-215	ENST00000447463	STIM1	Q13586	685 aa		13.71	□□□□□ -0.21
HDAC7-215	ENST00000447463	KIF19	Q2TAC6	998 aa		13.71	□□□□□ -0.21
HDAC7-215	ENST00000447463	ZNF776	Q68DI1	518 aa	Predicted RBP	13.71	□□□□□ -0.21
HDAC7-215	ENST00000447463	LRSAM1	Q6UWE0	723 aa		13.71	□□□□□ -0.21
HDAC7-215	ENST00000447463	PPM1K	Q8N3J5	372 aa		13.71	□□□□□ -0.21
HDAC7-215	ENST00000447463	HJURP	Q8NCD3	748 aa	Predicted RBP	13.71	□□□□□ -0.21
HDAC7-215	ENST00000447463	FIBIN	Q8TAL6	211 aa		13.71	□□□□□ -0.21
HDAC7-215	ENST00000447463	RHBDD1	Q8TEB9	315 aa		13.71	□□□□□ -0.21
HDAC7-215	ENST00000447463	CLEC4C	Q8WTT0	213 aa		13.71	□□□□□ -0.21
HDAC7-215	ENST00000447463	ERCC4	Q92889	916 aa	Predicted RBP	13.71	□□□□□ -0.21
HDAC7-215	ENST00000447463	BIRC7	Q96CA5	298 aa		13.71	□□□□□ -0.21
HDAC7-215	ENST00000447463	HSFY1	Q96LI6	401 aa		13.71	□□□□□ -0.21
HDAC7-215	ENST00000447463	DDX50	Q9BQ39	737 aa	Known RBP	13.71	□□□□□ -0.21
HDAC7-215	ENST00000447463	HOOK1	Q9UJC3	728 aa	Known RBP	13.71	□□□□□ -0.21
HDAC7-215	ENST00000447463	LHX6	Q9UPM6	363 aa		13.71	□□□□□ -0.21
HDAC7-215	ENST00000447463	ANKRD6	Q9Y2G4	727 aa		13.71	□□□□□ -0.21
HDAC7-215	ENST00000447463	SNX11	Q9Y5W9	270 aa		13.71	□□□□□ -0.21
HDAC7-215	ENST00000447463	GOLGA4	Q13439	2230 aa	Known RBP	13.71	□□□□□ -0.22
HDAC7-215	ENST00000447463	FASN	P49327	2511 aa	Known RBP	13.7	□□□□□ -0.22
HDAC7-215	ENST00000447463	TYW5	A2RUC4	315 aa	Known RBP	13.7	□□□□□ -0.22
HDAC7-215	ENST00000447463	RNF225	M0QZC1	329 aa	Predicted RBP	13.7	□□□□□ -0.22
HDAC7-215	ENST00000447463	PSMA7	O14818	248 aa		13.7	□□□□□ -0.22
HDAC7-215	ENST00000447463	FSBP	O95073	299 aa		13.7	□□□□□ -0.22
HDAC7-215	ENST00000447463	BRD2	P25440	801 aa	Known RBP	13.7	□□□□□ -0.22
HDAC7-215	ENST00000447463	CD27	P26842	260 aa		13.7	□□□□□ -0.22
HDAC7-215	ENST00000447463	ST8SIA6	P61647	398 aa		13.7	□□□□□ -0.22
HDAC7-215	ENST00000447463	CETN1	Q12798	172 aa		13.7	□□□□□ -0.22
HDAC7-215	ENST00000447463	NNT	Q13423	1086 aa		13.7	□□□□□ -0.22
HDAC7-215	ENST00000447463	ENGASE	Q8NFI3	743 aa		13.7	□□□□□ -0.22
HDAC7-215	ENST00000447463	IGSF8	Q969P0	613 aa		13.7	□□□□□ -0.22
HDAC7-215	ENST00000447463	TTC17	Q96AE7	1141 aa		13.7	□□□□□ -0.22
HDAC7-215	ENST00000447463	DHTKD1	Q96HY7	919 aa	Predicted RBP	13.7	□□□□□ -0.22
HDAC7-215	ENST00000447463	LMLN	Q96KR4	655 aa		13.7	□□□□□ -0.22
HDAC7-215	ENST00000447463	CEP63	Q96MT8	703 aa		13.7	□□□□□ -0.22
HDAC7-215	ENST00000447463	ZSWIM1	Q9BR11	485 aa		13.7	□□□□□ -0.22
HDAC7-215	ENST00000447463	RSPH9	Q9H1X1	276 aa	Predicted RBP	13.7	□□□□□ -0.22
HDAC7-215	ENST00000447463	CCDC86	Q9H6F5	360 aa	Known RBP	13.7	□□□□□ -0.22
HDAC7-215	ENST00000447463	TOR4A	Q9NXH8	423 aa		13.7	□□□□□ -0.22
HDAC7-215	ENST00000447463	STIM2	Q9P246	746 aa		13.7	□□□□□ -0.22
HDAC7-215	ENST00000447463	SCML1	Q9UN30	329 aa		13.7	□□□□□ -0.22
HDAC7-215	ENST00000447463	NCKAP1	Q9Y2A7	1128 aa		13.7	□□□□□ -0.22
HDAC7-215	ENST00000447463	P4HA2	O15460	535 aa		13.69	□□□□□ -0.22
HDAC7-215	ENST00000447463	RNASEH1	O60930	286 aa	Known RBP	13.69	□□□□□ -0.22
HDAC7-215	ENST00000447463	DKK1	O94907	266 aa		13.69	□□□□□ -0.22
HDAC7-215	ENST00000447463	ASL	P04424	464 aa		13.69	□□□□□ -0.22
HDAC7-215	ENST00000447463	GRK6	P43250	576 aa		13.69	□□□□□ -0.22
HDAC7-215	ENST00000447463	RPS24	P62847	133 aa	Known RBP	13.69	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms